starting phase `separate-from-pid1' build process now running as PID 10 phase `separate-from-pid1' succeeded after 0.0 seconds starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/2f019dziaxkr6hzvjpxkrfjq70vndlaj-r-minimal-4.4.1/bin:/gnu/store/m8h0hv6g549nh9n9xfjphjrzqg8g2r2w-tar-1.34/bin:/gnu/store/b3mdz7n6j9dzkyi0scdbldnzrwcc3nlg-gzip-1.13/bin:/gnu/store/2aqa6wi5y81yprflz59cjk91pgwvy48w-bzip2-1.0.8/bin:/gnu/store/k4ycd4b9zqrzxmdivjbhakjjymg8bfsv-file-5.45/bin:/gnu/store/ra6mdl923hpjw0yyrrj3j1snhibs32z0-diffutils-3.10/bin:/gnu/store/p76jj9sv007cj4hmfskjjsscy9z0vrc6-patch-2.7.6/bin:/gnu/store/p1g6q2qnp1m0iza4d09mknyqx1xspws3-findutils-4.9.0/bin:/gnu/store/mbgs4jl3vbhi6vya4p64hjfyj3739qzi-gawk-5.3.0/bin:/gnu/store/542d6rh6ci06ngcgiprnambqfws09i4f-zstd-1.5.2/bin:/gnu/store/mqb37w640rg4hx9nx00274r2kz54kc3w-sed-4.8/bin:/gnu/store/wpykxc5blf6vcw7bmqa4k21sqs44p8as-grep-3.11/bin:/gnu/store/cnv0rzdrdmlb3c43sr9n5vagjh3qn0k1-xz-5.4.5/bin:/gnu/store/yxcrwcdd7blcczlc50i6lgcnj2w7nlja-coreutils-9.1/bin:/gnu/store/c6i7ihy40368732m574lpgvygikd4ql9-make-4.4.1/bin:/gnu/store/ak41ci13apcxh5ahd8lc9rv6l7bqnwym-bash-minimal-5.1.16/bin:/gnu/store/d7ayy457nq3a42myfgqs2mc2zbx7z406-ld-wrapper-0/bin:/gnu/store/zf310q29z3apmkp3g6hck29z1d39ajly-binutils-2.41/bin:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/bin:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/bin:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/sbin' environment variable `R_LIBS_SITE' set to `/gnu/store/i8nx89m7rici38vhi006n7np6ipw1fj8-r-knitr-1.48/site-library/:/gnu/store/xcw4lwcnwk9983gqpr0n6f6fgm02ql9w-r-bdsmatrix-1.3-7/site-library/:/gnu/store/64nrx8f5yxqsrkgd8vpx73a9p6plq7di-r-lattice-0.22-6/site-library/:/gnu/store/wa3vfacmy3y7sl2km28vf4g41jam5lv1-r-mass-7.3-61/site-library/:/gnu/store/q4d24swy3mx7g3qliq5grja2kfdkkmxk-r-matrix-1.7-0/site-library/:/gnu/store/2ygix4n60ry4qj3v4v6kv00187m226bi-r-mvtnorm-1.3-1/site-library/:/gnu/store/fhchg5s0sv9v0217mgi39bppvx1xza2s-r-numderiv-2016.8-1.1/site-library/:/gnu/store/2aisir9ls80pk13imcmbbh282yk5sf0q-r-yaml-2.3.10/site-library/:/gnu/store/wi53q88smj8mbplcvpk1pjyf48fiisr4-r-xfun-0.47/site-library/:/gnu/store/s39ngmhl3r3krq4q4fxshq6pkwlg0c4r-r-highr-0.11/site-library/:/gnu/store/bw2dq120f5p8h4cgv5h52c798wvfg3as-r-evaluate-0.24.0/site-library/' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/2aqa6wi5y81yprflz59cjk91pgwvy48w-bzip2-1.0.8/include:/gnu/store/k4ycd4b9zqrzxmdivjbhakjjymg8bfsv-file-5.45/include:/gnu/store/mbgs4jl3vbhi6vya4p64hjfyj3739qzi-gawk-5.3.0/include:/gnu/store/cnv0rzdrdmlb3c43sr9n5vagjh3qn0k1-xz-5.4.5/include:/gnu/store/c6i7ihy40368732m574lpgvygikd4ql9-make-4.4.1/include:/gnu/store/zf310q29z3apmkp3g6hck29z1d39ajly-binutils-2.41/include:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/include:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/include:/gnu/store/hpcf3359y90qb3c8c1x5syr0ivrj54bg-linux-libre-headers-5.15.49/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/2aqa6wi5y81yprflz59cjk91pgwvy48w-bzip2-1.0.8/include:/gnu/store/k4ycd4b9zqrzxmdivjbhakjjymg8bfsv-file-5.45/include:/gnu/store/mbgs4jl3vbhi6vya4p64hjfyj3739qzi-gawk-5.3.0/include:/gnu/store/cnv0rzdrdmlb3c43sr9n5vagjh3qn0k1-xz-5.4.5/include:/gnu/store/c6i7ihy40368732m574lpgvygikd4ql9-make-4.4.1/include:/gnu/store/zf310q29z3apmkp3g6hck29z1d39ajly-binutils-2.41/include:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/include/c++:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/include:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/include:/gnu/store/hpcf3359y90qb3c8c1x5syr0ivrj54bg-linux-libre-headers-5.15.49/include' environment variable `OBJC_INCLUDE_PATH' set to `/gnu/store/2aqa6wi5y81yprflz59cjk91pgwvy48w-bzip2-1.0.8/include:/gnu/store/k4ycd4b9zqrzxmdivjbhakjjymg8bfsv-file-5.45/include:/gnu/store/mbgs4jl3vbhi6vya4p64hjfyj3739qzi-gawk-5.3.0/include:/gnu/store/cnv0rzdrdmlb3c43sr9n5vagjh3qn0k1-xz-5.4.5/include:/gnu/store/c6i7ihy40368732m574lpgvygikd4ql9-make-4.4.1/include:/gnu/store/zf310q29z3apmkp3g6hck29z1d39ajly-binutils-2.41/include:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/include:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/include:/gnu/store/hpcf3359y90qb3c8c1x5syr0ivrj54bg-linux-libre-headers-5.15.49/include' environment variable `OBJCPLUS_INCLUDE_PATH' set to `/gnu/store/2aqa6wi5y81yprflz59cjk91pgwvy48w-bzip2-1.0.8/include:/gnu/store/k4ycd4b9zqrzxmdivjbhakjjymg8bfsv-file-5.45/include:/gnu/store/mbgs4jl3vbhi6vya4p64hjfyj3739qzi-gawk-5.3.0/include:/gnu/store/cnv0rzdrdmlb3c43sr9n5vagjh3qn0k1-xz-5.4.5/include:/gnu/store/c6i7ihy40368732m574lpgvygikd4ql9-make-4.4.1/include:/gnu/store/zf310q29z3apmkp3g6hck29z1d39ajly-binutils-2.41/include:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/include/c++:/gnu/store/xgqbv2lkh6z9x6wgyfjvcpr8paw0zd9a-gcc-11.4.0/include:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/include:/gnu/store/hpcf3359y90qb3c8c1x5syr0ivrj54bg-linux-libre-headers-5.15.49/include' environment variable `LIBRARY_PATH' set to `/gnu/store/2f019dziaxkr6hzvjpxkrfjq70vndlaj-r-minimal-4.4.1/lib:/gnu/store/2aqa6wi5y81yprflz59cjk91pgwvy48w-bzip2-1.0.8/lib:/gnu/store/k4ycd4b9zqrzxmdivjbhakjjymg8bfsv-file-5.45/lib:/gnu/store/mbgs4jl3vbhi6vya4p64hjfyj3739qzi-gawk-5.3.0/lib:/gnu/store/cnv0rzdrdmlb3c43sr9n5vagjh3qn0k1-xz-5.4.5/lib:/gnu/store/zf310q29z3apmkp3g6hck29z1d39ajly-binutils-2.41/lib:/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/lib:/gnu/store/3wg51p14zipq2rl2k59pw7i8hirbdnb5-glibc-2.39-static/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/g88kcslhrdmd0b5bap2f2ghj26i7jdlm-glibc-2.39/lib/locale' environment variable `TZDIR' unset phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'C.UTF-8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' bbmle/ bbmle/NAMESPACE bbmle/man/ bbmle/man/profile.mle-class.Rd bbmle/man/slice.mle-class.Rd bbmle/man/namedrop.Rd bbmle/man/mle2.options.Rd bbmle/man/mle2.Rd bbmle/man/summary.mle-class.Rd bbmle/man/ICtab.Rd bbmle/man/profile-methods.Rd bbmle/man/BIC-methods.Rd bbmle/man/pop_pred_samp.Rd bbmle/man/strwrapx.Rd bbmle/man/sbinom.Rd bbmle/man/mle-class.Rd bbmle/man/as.data.frame.profile.mle2.Rd bbmle/man/get.mnames.Rd bbmle/man/dnorm_n.Rd bbmle/man/call.to.char.Rd bbmle/man/relist.Rd bbmle/man/slice.Rd bbmle/man/parnames.Rd bbmle/man/predict-methods.Rd bbmle/TODO bbmle/DESCRIPTION bbmle/build/ bbmle/build/vignette.rds bbmle/tests/ bbmle/tests/mortanal.Rout.save bbmle/tests/gradient_vecpar_profile.R bbmle/tests/boundstest.R bbmle/tests/binomtest1.R bbmle/tests/test-relist1.Rout.save bbmle/tests/methods.R bbmle/tests/testderiv.Rout.save bbmle/tests/testbounds.R bbmle/tests/update.R bbmle/tests/optimize.Rout.save bbmle/tests/predict.Rout.save bbmle/tests/startvals.Rout.save bbmle/tests/optimizers.R bbmle/tests/optimizers.Rout.save bbmle/tests/order.R bbmle/tests/prof_spec.R bbmle/tests/predict.R bbmle/tests/optimize.R bbmle/tests/optimx.Rout.save bbmle/tests/glmcomp.R bbmle/tests/testparpred.Rout.save bbmle/tests/tmptest.R bbmle/tests/grtest1.Rout.save bbmle/tests/grtest1.R bbmle/tests/tmptest.Rout.save bbmle/tests/binomtest1.Rout.save bbmle/tests/makesavefiles bbmle/tests/mortanal.R bbmle/tests/richards.R bbmle/tests/mkout bbmle/tests/ICtab.R bbmle/tests/prof_newmin.R bbmle/tests/controleval.Rout.save bbmle/tests/testderiv.R bbmle/tests/gradient_vecpar_profile.Rout.save bbmle/tests/testbounds.Rout.save bbmle/tests/startvals2.Rout.save bbmle/tests/optimx.R bbmle/tests/controleval.R bbmle/tests/richards.Rout.save bbmle/tests/profbound.Rout.save bbmle/tests/order.Rout.save bbmle/tests/BIC.R bbmle/tests/test-relist1.R bbmle/tests/testenv.R bbmle/tests/RUnit-tests.R bbmle/tests/testenv.Rout.save bbmle/tests/methods.Rout.save bbmle/tests/ICtab.Rout.save bbmle/tests/BIC.Rout.save bbmle/tests/startvals.R bbmle/tests/parscale.Rout.save bbmle/tests/startvals2.R bbmle/tests/eval.Rout.save bbmle/tests/glmcomp.Rout.save bbmle/tests/formulatest.R bbmle/tests/testparpred.R bbmle/tests/eval.R bbmle/tests/formulatest.Rout.save bbmle/tests/update.Rout.save bbmle/tests/parscale.R bbmle/tests/profbound.R bbmle/tests/impsamp.R bbmle/vignettes/ bbmle/vignettes/mle2.bib bbmle/vignettes/mle2.Rnw bbmle/vignettes/cc-attrib-nc.png bbmle/vignettes/chicago.bst bbmle/vignettes/quasi.Rnw bbmle/R/ bbmle/R/dists.R bbmle/R/update.R bbmle/R/confint.R bbmle/R/predict.R bbmle/R/IC.R bbmle/R/mle.R bbmle/R/mle2-class.R bbmle/R/mle2-methods.R bbmle/R/slice.R bbmle/R/TMB.R bbmle/R/profile.R bbmle/R/impsamp.R bbmle/MD5 bbmle/inst/ bbmle/inst/doc/ bbmle/inst/doc/mle2.Rnw bbmle/inst/doc/quasi.pdf bbmle/inst/doc/quasi.R bbmle/inst/doc/mle2.pdf bbmle/inst/doc/quasi.Rnw bbmle/inst/doc/mle2.R bbmle/inst/NEWS.Rd bbmle/inst/vignetteData/ bbmle/inst/vignetteData/orob1.rda phase `unpack' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `install' * installing *source* package ‘bbmle’ ... ** package ‘bbmle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bbmle) phase `install' succeeded after 6.4 seconds starting phase `check' Testing examples for package ‘bbmle’ Running specific tests for package ‘bbmle’ Running ‘BIC.R’ comparing ‘BIC.Rout’ to ‘BIC.Rout.save’ ... OK Running ‘binomtest1.R’ comparing ‘binomtest1.Rout’ to ‘binomtest1.Rout.save’ ... OK Running ‘boundstest.R’ Running ‘controleval.R’ comparing ‘controleval.Rout’ to ‘controleval.Rout.save’ ... OK Running ‘eval.R’ comparing ‘eval.Rout’ to ‘eval.Rout.save’ ... OK Running ‘formulatest.R’ comparing ‘formulatest.Rout’ to ‘formulatest.Rout.save’ ... OK Running ‘glmcomp.R’ Error: running the tests in ‘glmcomp.R’ failed phase `check' succeeded after 15.8 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `make-dynamic-linker-cache' phase `make-dynamic-linker-cache' succeeded after 0.0 seconds starting phase `install-license-files' installing 0 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds