starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/bin:/gnu/store/v6f44zccwh9z5zk3pjlywjybbi8n2hjh-tar-1.32/bin:/gnu/store/ncydgq2znms5n1d2k5yqshhf58nsixwv-gzip-1.10/bin:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/bin:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/bin:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/bin:/gnu/store/n4n560pfvvw50a9369axw5vj5rrqfj1n-diffutils-3.7/bin:/gnu/store/cd5qf3kcnlq35p9k392pjdpdzpsnds70-patch-2.7.6/bin:/gnu/store/hic7snhayfl7m6cpfqqr73nmm19bpqkg-findutils-4.7.0/bin:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/bin:/gnu/store/ishk7fswcs4gkwcp8mh788z4mvvl9bxh-sed-4.8/bin:/gnu/store/bhs4rj58v8j1narb2454raan2ps38xd8-grep-3.4/bin:/gnu/store/57xj5gcy1jbl9ai2lnrqnpr0dald9i65-coreutils-8.32/bin:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/bin:/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin:/gnu/store/mpa04aq8lblbcviyxywxcsb1zbi0mf39-ld-wrapper-0/bin:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/bin:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/sbin' environment variable `R_LIBS_SITE' unset environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include' environment variable `LIBRARY_PATH' set to `/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/lib:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/lib:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/lib:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/lib:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/lib:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib:/gnu/store/s3dcqzwqaakv1yx37by9chksdbkgih17-glibc-2.31-static/lib:/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib/locale' phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' slam/ slam/NAMESPACE slam/man/ slam/man/sums.Rd slam/man/matrix.Rd slam/man/norms.Rd slam/man/array.Rd slam/man/apply.Rd slam/man/abind.Rd slam/man/foreign.Rd slam/man/rollup.Rd slam/man/crossprod.Rd slam/man/options.Rd slam/DESCRIPTION slam/tests/ slam/tests/stm_ttcrossprod.R slam/tests/abind.R slam/tests/stm.Rout.save slam/tests/stm_apply.Rout.save slam/tests/dimgets.R slam/tests/rollup.Rout.save slam/tests/stm_ttcrossprod.Rout.save slam/tests/split.Rout.save slam/tests/subassign.R slam/tests/split.R slam/tests/crossprod.R slam/tests/crossprod.Rout.save slam/tests/stm_subassign.Rout.save slam/tests/stm_rollup.Rout.save slam/tests/util.Rout.save slam/tests/util.R slam/tests/extract.Rout.save slam/tests/stm_zeros.Rout.save slam/tests/abind.Rout.save slam/tests/ssa_valid.R slam/tests/matrix.Rout.save slam/tests/stm_rollup.R slam/tests/matrix_dimnames.Rout.save slam/tests/stm_valid.R slam/tests/ssa_valid.Rout.save slam/tests/stm_subassign.R slam/tests/subassign.Rout.save slam/tests/matrix.R slam/tests/stm_valid.Rout.save slam/tests/matrix_dimnames.R slam/tests/extract.R slam/tests/stm.R slam/tests/rollup.R slam/tests/stm_zeros.R slam/tests/stm_apply.R slam/tests/apply.R slam/tests/apply.Rout.save slam/src/ slam/src/util.c slam/src/apply.c slam/src/sparse.c slam/src/Makevars slam/src/grouped.c slam/src/dll.c slam/R/ slam/R/reduce.R slam/R/abind.R slam/R/subassign.R slam/R/crossprod.R slam/R/matrix.R slam/R/misc.R slam/R/array.R slam/R/stm.R slam/R/rollup.R slam/R/foreign.R slam/R/apply.R slam/MD5 slam/inst/ slam/inst/po/ slam/inst/po/en@quot/ slam/inst/po/en@quot/LC_MESSAGES/ slam/inst/po/en@quot/LC_MESSAGES/R-slam.mo slam/po/ slam/po/R-slam.pot phase `unpack' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `install' * installing *source* package ‘slam’ ... ** package ‘slam’ successfully unpacked and MD5 sums checked ** using staged installation ** libs gcc -I"/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c apply.c -o apply.o gcc -I"/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c dll.c -o dll.o gcc -I"/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c grouped.c -o grouped.o gcc -I"/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c sparse.c -o sparse.o gcc -I"/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c util.c -o util.o gcc -shared -L/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/lib -L/usr/local/lib -o slam.so apply.o dll.o grouped.o sparse.o util.o -L/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/lib -lRblas -L/gnu/store/741057r2x06zwg6zcmqmdyv51spm6n9i-gfortran-7.5.0-lib/lib/gcc/x86_64-unknown-linux-gnu/7.5.0 -L/gnu/store/741057r2x06zwg6zcmqmdyv51spm6n9i-gfortran-7.5.0-lib/lib -lgfortran -lm -lquadmath -L/gnu/store/djxka8lxrllfbmnha6nnx9vl09hk8cz0-r-minimal-4.0.4/lib/R/lib -lR installing to /gnu/store/pv601ndwpjisx8dr52fcf160n9m3p2zb-r-slam-0.1-48/site-library/00LOCK-slam/00new/slam/libs ** R ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (slam) phase `install' succeeded after 7.7 seconds starting phase `check' Testing examples for package ‘slam’ Running specific tests for package ‘slam’ Running ‘abind.R’ comparing ‘abind.Rout’ to ‘abind.Rout.save’ ... 31c31 < [1] "Attributes: < Component "dimnames": names for target but not for current >" --- > [1] "Attributes: < Component \"dimnames\": names for target but not for current >" 36c36 < [1] "Attributes: < Component "dimnames": names for target but not for current >" --- > [1] "Attributes: < Component \"dimnames\": names for target but not for current >" Running ‘apply.R’ comparing ‘apply.Rout’ to ‘apply.Rout.save’ ... OK Running ‘crossprod.R’ comparing ‘crossprod.Rout’ to ‘crossprod.Rout.save’ ... OK Running ‘dimgets.R’ Running ‘extract.R’ comparing ‘extract.Rout’ to ‘extract.Rout.save’ ... OK Running ‘matrix_dimnames.R’ comparing ‘matrix_dimnames.Rout’ to ‘matrix_dimnames.Rout.save’ ... OK Running ‘matrix.R’ comparing ‘matrix.Rout’ to ‘matrix.Rout.save’ ... OK Running ‘rollup.R’ comparing ‘rollup.Rout’ to ‘rollup.Rout.save’ ... OK Running ‘split.R’ comparing ‘split.Rout’ to ‘split.Rout.save’ ... OK Running ‘ssa_valid.R’ comparing ‘ssa_valid.Rout’ to ‘ssa_valid.Rout.save’ ... OK Running ‘stm_apply.R’ comparing ‘stm_apply.Rout’ to ‘stm_apply.Rout.save’ ... OK Running ‘stm_rollup.R’ comparing ‘stm_rollup.Rout’ to ‘stm_rollup.Rout.save’ ... OK Running ‘stm_subassign.R’ comparing ‘stm_subassign.Rout’ to ‘stm_subassign.Rout.save’ ... OK Running ‘stm_ttcrossprod.R’ comparing ‘stm_ttcrossprod.Rout’ to ‘stm_ttcrossprod.Rout.save’ ... OK Running ‘stm_valid.R’ comparing ‘stm_valid.Rout’ to ‘stm_valid.Rout.save’ ... OK Running ‘stm_zeros.R’ comparing ‘stm_zeros.Rout’ to ‘stm_zeros.Rout.save’ ... OK Running ‘stm.R’ comparing ‘stm.Rout’ to ‘stm.Rout.save’ ... OK Running ‘subassign.R’ comparing ‘subassign.Rout’ to ‘subassign.Rout.save’ ... OK Running ‘util.R’ comparing ‘util.Rout’ to ‘util.Rout.save’ ... OK phase `check' succeeded after 10.6 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `install-license-files' installing 0 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds