starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/f8s95qc6dfhl0r45m70hczw5zip0xjxq-python-wrapper-3.8.2/bin:/gnu/store/0dz7b0qxbj6m4ld53l8lnvv2yzdrbx8y-python-docutils-0.16/bin:/gnu/store/aw89s4cqv3i52qvr1gcrp7gimp67bxsf-python-jsonschema-3.2.0/bin:/gnu/store/r8qljdw3cdr9s7xr2jsd0mywwqqalcnr-python-nbformat-5.1.3/bin:/gnu/store/b7z337h96sz797s24j37d5dz1gi7rdnd-python-pulp-2.4/bin:/gnu/store/v6f44zccwh9z5zk3pjlywjybbi8n2hjh-tar-1.32/bin:/gnu/store/ncydgq2znms5n1d2k5yqshhf58nsixwv-gzip-1.10/bin:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/bin:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/bin:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/bin:/gnu/store/n4n560pfvvw50a9369axw5vj5rrqfj1n-diffutils-3.7/bin:/gnu/store/cd5qf3kcnlq35p9k392pjdpdzpsnds70-patch-2.7.6/bin:/gnu/store/hic7snhayfl7m6cpfqqr73nmm19bpqkg-findutils-4.7.0/bin:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/bin:/gnu/store/ishk7fswcs4gkwcp8mh788z4mvvl9bxh-sed-4.8/bin:/gnu/store/bhs4rj58v8j1narb2454raan2ps38xd8-grep-3.4/bin:/gnu/store/57xj5gcy1jbl9ai2lnrqnpr0dald9i65-coreutils-8.32/bin:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/bin:/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin:/gnu/store/mpa04aq8lblbcviyxywxcsb1zbi0mf39-ld-wrapper-0/bin:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/bin:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/sbin:/gnu/store/9w9jvy3bgjg4qaqmrij01nbppiccqr7c-python-3.8.2/bin:/gnu/store/dg57z9h754bzrjis21a1p7wd1jdxx8mi-python-jupyter-core-4.7.1/bin:/gnu/store/ih20zyn3r0c6ymv7h3faqx0sbdakmw7w-python-chardet-3.0.4/bin' environment variable `PYTHONPATH' set to `/gnu/store/iw4nff8b53cf65brf5bsxx3j8pn37fk3-python-appdirs-1.4.3/lib/python3.8/site-packages:/gnu/store/245vxi4a3ag53gykqcxwxxl0269wiwn7-python-configargparse-1.2.3/lib/python3.8/site-packages:/gnu/store/gjzspisxv2a3wbfnchgyrp74gbraf7qn-python-datrie-0.8.2/lib/python3.8/site-packages:/gnu/store/0dz7b0qxbj6m4ld53l8lnvv2yzdrbx8y-python-docutils-0.16/lib/python3.8/site-packages:/gnu/store/7ibhixh9y8vavqpxm848685jd39vi8cd-python-gitpython-3.1.0/lib/python3.8/site-packages:/gnu/store/6z2ri6yzpagh5pc32m8gn95lzarxkims-python-jinja2-2.11.2/lib/python3.8/site-packages:/gnu/store/aw89s4cqv3i52qvr1gcrp7gimp67bxsf-python-jsonschema-3.2.0/lib/python3.8/site-packages:/gnu/store/r8qljdw3cdr9s7xr2jsd0mywwqqalcnr-python-nbformat-5.1.3/lib/python3.8/site-packages:/gnu/store/lyf13z4jxf9m2s3bncyvkfwkajfkgk1d-python-networkx-2.5.1/lib/python3.8/site-packages:/gnu/store/nzn3ihp02lgryvz8rlb0ng2szvm362qd-python-psutil-5.8.0/lib/python3.8/site-packages:/gnu/store/b7z337h96sz797s24j37d5dz1gi7rdnd-python-pulp-2.4/lib/python3.8/site-packages:/gnu/store/s5nfa0iffzdz5la9753i8jmdlziyl0rs-python-pyyaml-5.3.1/lib/python3.8/site-packages:/gnu/store/y9c4w4f3bmxsng180qv9ianrdwk0giac-python-ratelimiter-1.2.0/lib/python3.8/site-packages:/gnu/store/w0fzqiyvfz68bpr552h8qcbw8dbdyh5x-python-requests-2.25.0/lib/python3.8/site-packages:/gnu/store/2acmaypf1kps9a2mfjgs2dy1s17s66h3-python-toposort-1.6/lib/python3.8/site-packages:/gnu/store/rd1qb8cziys70x7jf73r68lc4bpqf6cw-python-wrapt-1.11.2/lib/python3.8/site-packages:/gnu/store/9w9jvy3bgjg4qaqmrij01nbppiccqr7c-python-3.8.2/lib/python3.8/site-packages:/gnu/store/hhiazhdc6q9gxm2rn40w3prcd20rphyr-python-gitdb-4.0.2/lib/python3.8/site-packages:/gnu/store/r6jy13vsfb1fjlrhr43xdnz56d614aw6-python-markupsafe-1.1.1/lib/python3.8/site-packages:/gnu/store/hjmz8ymac939ribn7g3jkgms4dk2az3a-python-six-1.14.0/lib/python3.8/site-packages:/gnu/store/js9d3wri9lraxz08ypih6881rckmbgky-python-pyrsistent-0.16.0/lib/python3.8/site-packages:/gnu/store/hnxx25dg0pz64ykpz4d3667v9iancq62-python-importlib-metadata-1.5.0/lib/python3.8/site-packages:/gnu/store/lcxilb240bmkyiazf6s5jl92plac410s-python-attrs-19.3.0/lib/python3.8/site-packages:/gnu/store/ih0jscm3ilqn2r33ms8014ap26jhjfqa-python-traitlets-4.3.3/lib/python3.8/site-packages:/gnu/store/dg57z9h754bzrjis21a1p7wd1jdxx8mi-python-jupyter-core-4.7.1/lib/python3.8/site-packages:/gnu/store/j622d5rgwr7ac7xbinbv9szvwlnl95zd-python-ipython-genutils-0.1.0/lib/python3.8/site-packages:/gnu/store/148cnfsfvchak7yspwf5s8y7jvbbh0sy-python-decorator-4.3.0/lib/python3.8/site-packages:/gnu/store/1pky26mlxd4z3c33w3jr5m54a8s4gnqi-python-amply-0.1.4/lib/python3.8/site-packages:/gnu/store/vy8f9ksgng46c4nkdl3hg08ngypzrx7a-python-urllib3-1.26.2/lib/python3.8/site-packages:/gnu/store/ihl3h0s000vlkvadxvv21cbn4fqzvmav-python-idna-2.10/lib/python3.8/site-packages:/gnu/store/ih20zyn3r0c6ymv7h3faqx0sbdakmw7w-python-chardet-3.0.4/lib/python3.8/site-packages:/gnu/store/2j54g0s8db1b10ggs4rirfb5vv8abm2y-python-certifi-2020.12.5/lib/python3.8/site-packages:/gnu/store/wi1ss0q1zgn9sw1s3i15lrfic4byizb7-python-smmap-3.0.1/lib/python3.8/site-packages:/gnu/store/fsr8dqg8irjvxajilhq3qf2myin5l9cv-python-zipp-1.0.0/lib/python3.8/site-packages:/gnu/store/69lzz2dp87f896843jj05mw5z4hd9my2-python-pyparsing-2.4.6/lib/python3.8/site-packages:/gnu/store/dqm6p7w3l7whd0zzm3szr963mvpsfglh-python-pysocks-1.7.1/lib/python3.8/site-packages:/gnu/store/wand0zrwwnds6x636746116cfh3sy50k-python-pyopenssl-20.0.0/lib/python3.8/site-packages:/gnu/store/y793c1d3nmpgq1dacfccir6bkrj3ygf7-python-cryptography-3.3.1/lib/python3.8/site-packages:/gnu/store/bpbpmqwx2zvrw2h5k8c8fwk91xmzfym3-python-more-itertools-8.2.0/lib/python3.8/site-packages:/gnu/store/q01v2xjfcl7d020y3yh865695gm8i3gx-python-iso8601-0.1.13/lib/python3.8/site-packages:/gnu/store/j3k8ah697pg289zg7j9ix4a53i94liw4-python-cffi-1.14.4/lib/python3.8/site-packages:/gnu/store/xkcc4372psi79xiidw4k33nmyf6mk36h-python-asn1crypto-1.4.0/lib/python3.8/site-packages:/gnu/store/k08j1silv8zxfglz3mb5q7ngmya9cv39-python-pycparser-2.20/lib/python3.8/site-packages' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/9w9jvy3bgjg4qaqmrij01nbppiccqr7c-python-3.8.2/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/9w9jvy3bgjg4qaqmrij01nbppiccqr7c-python-3.8.2/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include' environment variable `LIBRARY_PATH' set to `/gnu/store/iw4nff8b53cf65brf5bsxx3j8pn37fk3-python-appdirs-1.4.3/lib:/gnu/store/245vxi4a3ag53gykqcxwxxl0269wiwn7-python-configargparse-1.2.3/lib:/gnu/store/gjzspisxv2a3wbfnchgyrp74gbraf7qn-python-datrie-0.8.2/lib:/gnu/store/0dz7b0qxbj6m4ld53l8lnvv2yzdrbx8y-python-docutils-0.16/lib:/gnu/store/7ibhixh9y8vavqpxm848685jd39vi8cd-python-gitpython-3.1.0/lib:/gnu/store/6z2ri6yzpagh5pc32m8gn95lzarxkims-python-jinja2-2.11.2/lib:/gnu/store/aw89s4cqv3i52qvr1gcrp7gimp67bxsf-python-jsonschema-3.2.0/lib:/gnu/store/r8qljdw3cdr9s7xr2jsd0mywwqqalcnr-python-nbformat-5.1.3/lib:/gnu/store/lyf13z4jxf9m2s3bncyvkfwkajfkgk1d-python-networkx-2.5.1/lib:/gnu/store/nzn3ihp02lgryvz8rlb0ng2szvm362qd-python-psutil-5.8.0/lib:/gnu/store/b7z337h96sz797s24j37d5dz1gi7rdnd-python-pulp-2.4/lib:/gnu/store/s5nfa0iffzdz5la9753i8jmdlziyl0rs-python-pyyaml-5.3.1/lib:/gnu/store/y9c4w4f3bmxsng180qv9ianrdwk0giac-python-ratelimiter-1.2.0/lib:/gnu/store/w0fzqiyvfz68bpr552h8qcbw8dbdyh5x-python-requests-2.25.0/lib:/gnu/store/2acmaypf1kps9a2mfjgs2dy1s17s66h3-python-toposort-1.6/lib:/gnu/store/rd1qb8cziys70x7jf73r68lc4bpqf6cw-python-wrapt-1.11.2/lib:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/lib:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/lib:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/lib:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/lib:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/lib:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib:/gnu/store/s3dcqzwqaakv1yx37by9chksdbkgih17-glibc-2.31-static/lib:/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib:/gnu/store/9w9jvy3bgjg4qaqmrij01nbppiccqr7c-python-3.8.2/lib:/gnu/store/hhiazhdc6q9gxm2rn40w3prcd20rphyr-python-gitdb-4.0.2/lib:/gnu/store/r6jy13vsfb1fjlrhr43xdnz56d614aw6-python-markupsafe-1.1.1/lib:/gnu/store/hjmz8ymac939ribn7g3jkgms4dk2az3a-python-six-1.14.0/lib:/gnu/store/js9d3wri9lraxz08ypih6881rckmbgky-python-pyrsistent-0.16.0/lib:/gnu/store/hnxx25dg0pz64ykpz4d3667v9iancq62-python-importlib-metadata-1.5.0/lib:/gnu/store/lcxilb240bmkyiazf6s5jl92plac410s-python-attrs-19.3.0/lib:/gnu/store/ih0jscm3ilqn2r33ms8014ap26jhjfqa-python-traitlets-4.3.3/lib:/gnu/store/dg57z9h754bzrjis21a1p7wd1jdxx8mi-python-jupyter-core-4.7.1/lib:/gnu/store/j622d5rgwr7ac7xbinbv9szvwlnl95zd-python-ipython-genutils-0.1.0/lib:/gnu/store/148cnfsfvchak7yspwf5s8y7jvbbh0sy-python-decorator-4.3.0/lib:/gnu/store/1pky26mlxd4z3c33w3jr5m54a8s4gnqi-python-amply-0.1.4/lib:/gnu/store/vy8f9ksgng46c4nkdl3hg08ngypzrx7a-python-urllib3-1.26.2/lib:/gnu/store/ihl3h0s000vlkvadxvv21cbn4fqzvmav-python-idna-2.10/lib:/gnu/store/ih20zyn3r0c6ymv7h3faqx0sbdakmw7w-python-chardet-3.0.4/lib:/gnu/store/2j54g0s8db1b10ggs4rirfb5vv8abm2y-python-certifi-2020.12.5/lib:/gnu/store/wi1ss0q1zgn9sw1s3i15lrfic4byizb7-python-smmap-3.0.1/lib:/gnu/store/fsr8dqg8irjvxajilhq3qf2myin5l9cv-python-zipp-1.0.0/lib:/gnu/store/69lzz2dp87f896843jj05mw5z4hd9my2-python-pyparsing-2.4.6/lib:/gnu/store/dqm6p7w3l7whd0zzm3szr963mvpsfglh-python-pysocks-1.7.1/lib:/gnu/store/wand0zrwwnds6x636746116cfh3sy50k-python-pyopenssl-20.0.0/lib:/gnu/store/y793c1d3nmpgq1dacfccir6bkrj3ygf7-python-cryptography-3.3.1/lib:/gnu/store/bpbpmqwx2zvrw2h5k8c8fwk91xmzfym3-python-more-itertools-8.2.0/lib:/gnu/store/q01v2xjfcl7d020y3yh865695gm8i3gx-python-iso8601-0.1.13/lib:/gnu/store/j3k8ah697pg289zg7j9ix4a53i94liw4-python-cffi-1.14.4/lib:/gnu/store/xkcc4372psi79xiidw4k33nmyf6mk36h-python-asn1crypto-1.4.0/lib:/gnu/store/k08j1silv8zxfglz3mb5q7ngmya9cv39-python-pycparser-2.20/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib/locale' environment variable `JUPYTER_CONFIG_DIR' unset environment variable `JUPYTER_PATH' unset phase `set-paths' succeeded after 0.4 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' snakemake-5.32.2/ snakemake-5.32.2/LICENSE.md snakemake-5.32.2/MANIFEST.in snakemake-5.32.2/PKG-INFO snakemake-5.32.2/README.md snakemake-5.32.2/setup.cfg snakemake-5.32.2/setup.py snakemake-5.32.2/snakemake/ snakemake-5.32.2/snakemake/__init__.py snakemake-5.32.2/snakemake/__main__.py snakemake-5.32.2/snakemake/_version.py snakemake-5.32.2/snakemake/benchmark.py snakemake-5.32.2/snakemake/caching/ snakemake-5.32.2/snakemake/caching/__init__.py snakemake-5.32.2/snakemake/caching/hash.py snakemake-5.32.2/snakemake/caching/local.py snakemake-5.32.2/snakemake/caching/remote.py snakemake-5.32.2/snakemake/checkpoints.py snakemake-5.32.2/snakemake/common.py snakemake-5.32.2/snakemake/cwl.py snakemake-5.32.2/snakemake/dag.py snakemake-5.32.2/snakemake/decorators.py snakemake-5.32.2/snakemake/deployment/ snakemake-5.32.2/snakemake/deployment/__init__.py snakemake-5.32.2/snakemake/deployment/conda.py snakemake-5.32.2/snakemake/deployment/env_modules.py snakemake-5.32.2/snakemake/deployment/singularity.py snakemake-5.32.2/snakemake/exceptions.py snakemake-5.32.2/snakemake/executors/ snakemake-5.32.2/snakemake/executors/__init__.py snakemake-5.32.2/snakemake/executors/ga4gh_tes.py snakemake-5.32.2/snakemake/executors/google_lifesciences.py snakemake-5.32.2/snakemake/executors/google_lifesciences_helper.py snakemake-5.32.2/snakemake/executors/jobscript.sh snakemake-5.32.2/snakemake/gui.html snakemake-5.32.2/snakemake/gui.py snakemake-5.32.2/snakemake/io.py snakemake-5.32.2/snakemake/jobs.py snakemake-5.32.2/snakemake/linting/ snakemake-5.32.2/snakemake/linting/__init__.py snakemake-5.32.2/snakemake/linting/links.py snakemake-5.32.2/snakemake/linting/rules.py snakemake-5.32.2/snakemake/linting/snakefiles.py snakemake-5.32.2/snakemake/logging.py snakemake-5.32.2/snakemake/notebook.py snakemake-5.32.2/snakemake/output_index.py snakemake-5.32.2/snakemake/parser.py snakemake-5.32.2/snakemake/persistence.py snakemake-5.32.2/snakemake/remote/ snakemake-5.32.2/snakemake/remote/AzBlob.py snakemake-5.32.2/snakemake/remote/EGA.py snakemake-5.32.2/snakemake/remote/FTP.py snakemake-5.32.2/snakemake/remote/GS.py snakemake-5.32.2/snakemake/remote/HTTP.py snakemake-5.32.2/snakemake/remote/NCBI.py snakemake-5.32.2/snakemake/remote/S3.py snakemake-5.32.2/snakemake/remote/S3Mocked.py snakemake-5.32.2/snakemake/remote/SFTP.py snakemake-5.32.2/snakemake/remote/XRootD.py snakemake-5.32.2/snakemake/remote/__init__.py snakemake-5.32.2/snakemake/remote/dropbox.py snakemake-5.32.2/snakemake/remote/gfal.py snakemake-5.32.2/snakemake/remote/gridftp.py snakemake-5.32.2/snakemake/remote/iRODS.py snakemake-5.32.2/snakemake/remote/webdav.py snakemake-5.32.2/snakemake/report/ snakemake-5.32.2/snakemake/report/__init__.py snakemake-5.32.2/snakemake/report/report.html.jinja2 snakemake-5.32.2/snakemake/report.css snakemake-5.32.2/snakemake/resources.py snakemake-5.32.2/snakemake/rules.py snakemake-5.32.2/snakemake/scheduler.py snakemake-5.32.2/snakemake/script.py snakemake-5.32.2/snakemake/shell.py snakemake-5.32.2/snakemake/stats.py snakemake-5.32.2/snakemake/unit_tests/ snakemake-5.32.2/snakemake/unit_tests/__init__.py snakemake-5.32.2/snakemake/unit_tests/templates/ snakemake-5.32.2/snakemake/unit_tests/templates/__init__.py snakemake-5.32.2/snakemake/unit_tests/templates/common.py.jinja2 snakemake-5.32.2/snakemake/unit_tests/templates/ruletest.py.jinja2 snakemake-5.32.2/snakemake/utils.py snakemake-5.32.2/snakemake/workflow.py snakemake-5.32.2/snakemake/wrapper.py snakemake-5.32.2/snakemake.egg-info/ snakemake-5.32.2/snakemake.egg-info/PKG-INFO snakemake-5.32.2/snakemake.egg-info/SOURCES.txt snakemake-5.32.2/snakemake.egg-info/dependency_links.txt snakemake-5.32.2/snakemake.egg-info/entry_points.txt snakemake-5.32.2/snakemake.egg-info/not-zip-safe snakemake-5.32.2/snakemake.egg-info/requires.txt snakemake-5.32.2/snakemake.egg-info/top_level.txt snakemake-5.32.2/versioneer.py phase `unpack' succeeded after 0.1 seconds starting phase `call-wrapper-not-wrapped-snakemake' phase `call-wrapper-not-wrapped-snakemake' succeeded after 0.0 seconds starting phase `ensure-no-mtimes-pre-1980' phase `ensure-no-mtimes-pre-1980' succeeded after 0.0 seconds starting phase `enable-bytecode-determinism' phase `enable-bytecode-determinism' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' patch-shebang: ./snakemake/executors/google_lifesciences_helper.py: changing `/usr/bin/env python' to `/gnu/store/f8s95qc6dfhl0r45m70hczw5zip0xjxq-python-wrapper-3.8.2/bin/python' patch-shebang: ./snakemake/executors/jobscript.sh: changing `/bin/sh' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/sh' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `build' running "python setup.py" with command "build" and parameters () running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/common.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/stats.py -> build/lib/snakemake copying snakemake/script.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake creating build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote creating build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/remote.py -> build/lib/snakemake/caching creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/report/report.html.jinja2 -> build/lib/snakemake/report copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '5.32.2' phase `build' succeeded after 0.9 seconds starting phase `install' running "python setup.py" with command "install" and parameters ("--prefix=/gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2" "--single-version-externally-managed" "--root=/") running install running build running build_py UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '5.32.2' running install_lib creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2 creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8 creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/cwl.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/scheduler.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/report copying build/lib/snakemake/report/report.html.jinja2 -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/report copying build/lib/snakemake/report/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/report copying build/lib/snakemake/rules.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/decorators.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/jobs.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/exceptions.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/resources.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/utils.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/persistence.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/shell.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/io.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests copying build/lib/snakemake/checkpoints.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/common.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/logging.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/GS.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/S3.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote copying build/lib/snakemake/__main__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/notebook.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/output_index.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/benchmark.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors copying build/lib/snakemake/executors/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors copying build/lib/snakemake/executors/ga4gh_tes.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors copying build/lib/snakemake/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/report.css -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/gui.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/parser.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment copying build/lib/snakemake/stats.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/script.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching copying build/lib/snakemake/caching/hash.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching copying build/lib/snakemake/caching/local.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching copying build/lib/snakemake/caching/remote.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching copying build/lib/snakemake/gui.html -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/dag.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/_version.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake copying build/lib/snakemake/wrapper.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake creating /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting copying build/lib/snakemake/linting/links.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting copying build/lib/snakemake/linting/rules.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting copying build/lib/snakemake/workflow.py -> /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/cwl.py to cwl.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/scheduler.py to scheduler.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/report/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/rules.py to rules.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/decorators.py to decorators.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/jobs.py to jobs.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/exceptions.py to exceptions.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/resources.py to resources.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/utils.py to utils.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/persistence.py to persistence.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/shell.py to shell.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/io.py to io.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests/templates/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/unit_tests/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/checkpoints.py to checkpoints.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/common.py to common.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/logging.py to logging.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/AzBlob.py to AzBlob.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/EGA.py to EGA.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/gridftp.py to gridftp.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/iRODS.py to iRODS.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/dropbox.py to dropbox.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/GS.py to GS.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/gfal.py to gfal.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/NCBI.py to NCBI.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/XRootD.py to XRootD.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/S3.py to S3.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/SFTP.py to SFTP.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/S3Mocked.py to S3Mocked.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/FTP.py to FTP.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/HTTP.py to HTTP.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/remote/webdav.py to webdav.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/__main__.py to __main__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/notebook.py to notebook.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/output_index.py to output_index.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/benchmark.py to benchmark.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors/google_lifesciences.py to google_lifesciences.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors/google_lifesciences_helper.py to google_lifesciences_helper.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/executors/ga4gh_tes.py to ga4gh_tes.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/gui.py to gui.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/parser.py to parser.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment/singularity.py to singularity.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment/conda.py to conda.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment/env_modules.py to env_modules.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/deployment/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/stats.py to stats.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/script.py to script.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching/hash.py to hash.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching/local.py to local.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/caching/remote.py to remote.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/dag.py to dag.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/_version.py to _version.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/wrapper.py to wrapper.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting/snakefiles.py to snakefiles.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting/links.py to links.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting/rules.py to rules.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/linting/__init__.py to __init__.cpython-38.pyc byte-compiling /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake/workflow.py to workflow.cpython-38.pyc running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib/python3.8/site-packages/snakemake-5.32.2-py3.8.egg-info running install_scripts Installing snakemake script to /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/bin Installing snakemake-bash-completion script to /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/bin phase `install' succeeded after 1.0 seconds starting phase `wrap' find-files: /gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/sbin: No such file or directory phase `wrap' succeeded after 0.0 seconds starting phase `check' test suite not run phase `check' succeeded after 0.0 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `rename-pth-file' phase `rename-pth-file' succeeded after 0.0 seconds starting phase `strip' stripping binaries in "/gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib" with "strip" and flags ("--strip-debug" "--enable-deterministic-archives") stripping binaries in "/gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/bin" with "strip" and flags ("--strip-debug" "--enable-deterministic-archives") phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' validating RUNPATH of 0 binaries in "/gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/lib"... validating RUNPATH of 0 binaries in "/gnu/store/wssv3h893h3aqp9yhpxcwvrqf3j6297h-snakemake-5.32.2/bin"... phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `install-license-files' installing 1 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds