starting phase `set-SOURCE-DATE-EPOCH'
phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds
starting phase `set-paths'
environment variable `PATH' set to `/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/bin:/gnu/store/99c25918hl9pihix8hparmc96q6zrpwy-tar-1.34/bin:/gnu/store/l0yga4lrwwf74rz7fb0dadglg27ajpsx-gzip-1.10/bin:/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/bin:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/bin:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/bin:/gnu/store/h0rx6y95zin61fp5wlyjly4g9j2hma18-diffutils-3.8/bin:/gnu/store/7j8j7m0kgb7kv2fc18qvrdj7gs3jc4mx-patch-2.7.6/bin:/gnu/store/x4yglk9pn2s2ixl1b4lj151bd2yvlgww-findutils-4.8.0/bin:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/bin:/gnu/store/cnwr7widbi6470kfyb13krx46kz5anmy-sed-4.8/bin:/gnu/store/bx47clwnxn51m7jdwfimz4lw2fh8g21v-grep-3.6/bin:/gnu/store/9a0cjh929maqvkxn3inv6jqbxn72fkx0-coreutils-8.32/bin:/gnu/store/dhx00nrv9r52f6xivg0xa4iihpl9awyk-make-4.3/bin:/gnu/store/7s2zlc4r9wqvlh9x2gqmzm4lnmbsdzmn-bash-minimal-5.1.8/bin:/gnu/store/4bzvr16pyax9224v9r72rqxswj9931sb-ld-wrapper-0/bin:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/bin:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/bin:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/bin:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/sbin'
environment variable `R_LIBS_SITE' set to `/gnu/store/8q9dsp5fbcl0vwi4f231s7bz89p2h844-r-knitr-1.39/site-library/:/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/:/gnu/store/m37anj1yfmk5qx7g44vpbgsq62ylzfqr-r-rlang-1.0.3/site-library/:/gnu/store/gncaf9nlzjp7z6j7rjnhmpi3id7f3d2z-r-yaml-2.3.5/site-library/:/gnu/store/yhb7aqvv6q7niskk8abkfm6c49l2jwzd-r-xfun-0.31/site-library/:/gnu/store/iyp7hrr5188mrdhahs3irq3i74zlyndn-r-stringr-1.4.0/site-library/:/gnu/store/ig10kl87xzcjhzw3kv2w4ychf42yp19c-r-highr-0.9/site-library/:/gnu/store/ds1cffn0c2xgihll60bqr1kgnnd61ixy-r-evaluate-0.15/site-library/:/gnu/store/kdy7lp6f2v7jzg1w6mp9rcn1n8azfg7g-r-stringi-1.7.6/site-library/:/gnu/store/wg7w9ix2cjgsx2c5skx8pij7mjifi4w8-r-magrittr-2.0.3/site-library/:/gnu/store/1n4f86cwnddvq0dmcqp9y6ak1mdk9wf1-r-glue-1.6.2/site-library/'
environment variable `BASH_LOADABLES_PATH' unset
environment variable `C_INCLUDE_PATH' set to `/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/include:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/include:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/include:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/include:/gnu/store/dhx00nrv9r52f6xivg0xa4iihpl9awyk-make-4.3/include:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/include:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/include:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/include:/gnu/store/wsx4kz1gh6cpdhx393frhqknmswbggq8-linux-libre-headers-5.10.35/include'
environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/include:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/include:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/include:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/include:/gnu/store/dhx00nrv9r52f6xivg0xa4iihpl9awyk-make-4.3/include:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/include:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/include/c++:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/include:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/include:/gnu/store/wsx4kz1gh6cpdhx393frhqknmswbggq8-linux-libre-headers-5.10.35/include'
environment variable `LIBRARY_PATH' set to `/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib:/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/lib:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/lib:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/lib:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/lib:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/lib:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/lib:/gnu/store/1s4k8h3h1ka9za4yzg0dfjnlhab5k14p-glibc-2.33-static/lib:/gnu/store/6p5m4cv8psfzy5xn5yhvhmjl261wg34m-glibc-utf8-locales-2.33/lib'
environment variable `GUIX_LOCPATH' set to `/gnu/store/6p5m4cv8psfzy5xn5yhvhmjl261wg34m-glibc-utf8-locales-2.33/lib/locale'
phase `set-paths' succeeded after 0.0 seconds
starting phase `install-locale'
using 'en_US.utf8' locale for category "LC_ALL"
phase `install-locale' succeeded after 0.0 seconds
starting phase `unpack'
later/
later/NAMESPACE
later/LICENSE.note
later/LICENSE
later/README.md
later/man/
later/man/list_queue.Rd
later/man/create_loop.Rd
later/man/logLevel.Rd
later/man/loop_empty.Rd
later/man/later.Rd
later/man/run_now.Rd
later/man/next_op_secs.Rd
later/DESCRIPTION
later/build/
later/build/vignette.rds
later/tests/
later/tests/testthat/
later/tests/testthat/test-run_now.R
later/tests/testthat/test-cancel.R
later/tests/testthat/test-c-api.R
later/tests/testthat/test-private-loops.R
later/tests/testthat.R
later/src/
later/src/timestamp_unix.cpp
later/src/later_win32.cpp
later/src/callback_registry_table.h
later/src/timeconv.h
later/src/callback_registry.h
later/src/threadutils.h
later/src/init.c
later/src/tinycthread.c
later/src/utils.h
later/src/debug.cpp
later/src/callback_registry.cpp
later/src/optional.h
later/src/debug.h
later/src/Makevars.win
later/src/timestamp_win32.cpp
later/src/later.cpp
later/src/interrupt.h
later/src/later_posix.cpp
later/src/timer_posix.cpp
later/src/badthreads.h
later/src/timer_posix.h
later/src/later.h
later/src/tinycthread.h
later/src/Makevars.in
later/src/RcppExports.cpp
later/src/timestamp.h
later/vignettes/
later/vignettes/later-cpp.Rmd
later/R/
later/R/later.R
later/R/RcppExports.R
later/R/debug.R
later/NEWS.md
later/MD5
later/inst/
later/inst/doc/
later/inst/doc/later-cpp.Rmd
later/inst/doc/later-cpp.html
later/inst/include/
later/inst/include/later_api.h
later/inst/include/later.h
later/inst/bgtest.cpp
later/cleanup
later/configure
phase `unpack' succeeded after 0.0 seconds
starting phase `patch-usr-bin-file'
phase `patch-usr-bin-file' succeeded after 0.0 seconds
starting phase `patch-source-shebangs'
patch-shebang: ./cleanup: changing `/bin/sh' to `/gnu/store/7s2zlc4r9wqvlh9x2gqmzm4lnmbsdzmn-bash-minimal-5.1.8/bin/sh'
patch-shebang: ./configure: changing `/bin/sh' to `/gnu/store/7s2zlc4r9wqvlh9x2gqmzm4lnmbsdzmn-bash-minimal-5.1.8/bin/sh'
phase `patch-source-shebangs' succeeded after 0.0 seconds
starting phase `patch-generated-file-shebangs'
phase `patch-generated-file-shebangs' succeeded after 0.0 seconds
starting phase `install'
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
* installing *source* package ‘later’ ...
files ‘cleanup’, ‘configure’ have the wrong MD5 checksums
** using staged installation
Running configure script
-latomic linker flag not needed.
** libs
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c callback_registry.cpp -o callback_registry.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c debug.cpp -o debug.o
gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c init.c -o init.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c later.cpp -o later.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c later_posix.cpp -o later_posix.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c later_win32.cpp -o later_win32.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c timer_posix.cpp -o timer_posix.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c timestamp_unix.cpp -o timestamp_unix.o
g++ -std=gnu++11 -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c timestamp_win32.cpp -o timestamp_win32.o
gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS  -I'/gnu/store/kxk4c3sf6cim0kq46pvxn9q53r87j515-r-rcpp-1.0.8.3/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -c tinycthread.c -o tinycthread.o
g++ -std=gnu++11 -shared -L/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/lib -L/usr/local/lib -o later.so RcppExports.o callback_registry.o debug.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o -pthread -L/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/lib -lR
installing to /gnu/store/5csslgw1qm8hmpwzn23cnld0bypbz9xg-r-later-1.3.0/site-library/00LOCK-later/00new/later/libs
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
** help
*** installing help indices
** building package indices
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
** testing if installed package keeps a record of temporary installation path
* DONE (later)
phase `install' succeeded after 41.4 seconds
starting phase `check'
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Warning message:
In normalizePath("~") :
  path[1]="/homeless-shelter": No such file or directory
Testing examples for package ‘later’
Running specific tests for package ‘later’
  Running ‘testthat.R’
phase `check' succeeded after 1.8 seconds
starting phase `patch-shebangs'
phase `patch-shebangs' succeeded after 0.0 seconds
starting phase `strip'
phase `strip' succeeded after 0.0 seconds
starting phase `validate-runpath'
phase `validate-runpath' succeeded after 0.0 seconds
starting phase `validate-documentation-location'
phase `validate-documentation-location' succeeded after 0.0 seconds
starting phase `delete-info-dir-file'
phase `delete-info-dir-file' succeeded after 0.0 seconds
starting phase `patch-dot-desktop-files'
phase `patch-dot-desktop-files' succeeded after 0.0 seconds
starting phase `make-dynamic-linker-cache'
phase `make-dynamic-linker-cache' succeeded after 0.0 seconds
starting phase `install-license-files'
installing 2 license files from '.'
phase `install-license-files' succeeded after 0.0 seconds
starting phase `reset-gzip-timestamps'
phase `reset-gzip-timestamps' succeeded after 0.0 seconds
starting phase `compress-documentation'
phase `compress-documentation' succeeded after 0.0 seconds