starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/bin:/gnu/store/99c25918hl9pihix8hparmc96q6zrpwy-tar-1.34/bin:/gnu/store/l0yga4lrwwf74rz7fb0dadglg27ajpsx-gzip-1.10/bin:/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/bin:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/bin:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/bin:/gnu/store/h0rx6y95zin61fp5wlyjly4g9j2hma18-diffutils-3.8/bin:/gnu/store/7j8j7m0kgb7kv2fc18qvrdj7gs3jc4mx-patch-2.7.6/bin:/gnu/store/x4yglk9pn2s2ixl1b4lj151bd2yvlgww-findutils-4.8.0/bin:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/bin:/gnu/store/cnwr7widbi6470kfyb13krx46kz5anmy-sed-4.8/bin:/gnu/store/bx47clwnxn51m7jdwfimz4lw2fh8g21v-grep-3.6/bin:/gnu/store/9a0cjh929maqvkxn3inv6jqbxn72fkx0-coreutils-8.32/bin:/gnu/store/dhx00nrv9r52f6xivg0xa4iihpl9awyk-make-4.3/bin:/gnu/store/7s2zlc4r9wqvlh9x2gqmzm4lnmbsdzmn-bash-minimal-5.1.8/bin:/gnu/store/4bzvr16pyax9224v9r72rqxswj9931sb-ld-wrapper-0/bin:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/bin:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/bin:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/bin:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/sbin' environment variable `R_LIBS_SITE' set to `/gnu/store/8q9dsp5fbcl0vwi4f231s7bz89p2h844-r-knitr-1.39/site-library/:/gnu/store/mdgzyd8p5n00i38la8pnwk3bhcn03xwc-r-backports-1.4.1/site-library/:/gnu/store/gncaf9nlzjp7z6j7rjnhmpi3id7f3d2z-r-yaml-2.3.5/site-library/:/gnu/store/yhb7aqvv6q7niskk8abkfm6c49l2jwzd-r-xfun-0.31/site-library/:/gnu/store/iyp7hrr5188mrdhahs3irq3i74zlyndn-r-stringr-1.4.0/site-library/:/gnu/store/ig10kl87xzcjhzw3kv2w4ychf42yp19c-r-highr-0.9/site-library/:/gnu/store/ds1cffn0c2xgihll60bqr1kgnnd61ixy-r-evaluate-0.15/site-library/:/gnu/store/kdy7lp6f2v7jzg1w6mp9rcn1n8azfg7g-r-stringi-1.7.6/site-library/:/gnu/store/wg7w9ix2cjgsx2c5skx8pij7mjifi4w8-r-magrittr-2.0.3/site-library/:/gnu/store/1n4f86cwnddvq0dmcqp9y6ak1mdk9wf1-r-glue-1.6.2/site-library/' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/include:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/include:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/include:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/include:/gnu/store/dhx00nrv9r52f6xivg0xa4iihpl9awyk-make-4.3/include:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/include:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/include:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/include:/gnu/store/wsx4kz1gh6cpdhx393frhqknmswbggq8-linux-libre-headers-5.10.35/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/include:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/include:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/include:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/include:/gnu/store/dhx00nrv9r52f6xivg0xa4iihpl9awyk-make-4.3/include:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/include:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/include/c++:/gnu/store/v5xfd4vy1lvqikdl1rzs8aklgsnqwd26-gcc-10.3.0/include:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/include:/gnu/store/wsx4kz1gh6cpdhx393frhqknmswbggq8-linux-libre-headers-5.10.35/include' environment variable `LIBRARY_PATH' set to `/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib:/gnu/store/ihakfb51zdgjz3v9nkj0ja9zk9ng8xzl-bzip2-1.0.8/lib:/gnu/store/fk24dx8qz1b5smnc4ljfw25xn7yjps0q-xz-5.2.5/lib:/gnu/store/vl1b3nq6gijpzbl03zq92m5dwgs17nik-file-5.39/lib:/gnu/store/vzq0il5z2d6ksllb525m9xaqzv829g3k-gawk-5.1.0/lib:/gnu/store/v4a7zw8w52v64kw5781ypa8gjwd098jz-binutils-2.37/lib:/gnu/store/0iapawfss4xnxls622g23qpk4mwb9ihp-glibc-2.33/lib:/gnu/store/1s4k8h3h1ka9za4yzg0dfjnlhab5k14p-glibc-2.33-static/lib:/gnu/store/6p5m4cv8psfzy5xn5yhvhmjl261wg34m-glibc-utf8-locales-2.33/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/6p5m4cv8psfzy5xn5yhvhmjl261wg34m-glibc-utf8-locales-2.33/lib/locale' phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' checkmate/ checkmate/NAMESPACE checkmate/LICENSE checkmate/README.md checkmate/man/ checkmate/man/checkFormula.Rd checkmate/man/checkSubset.Rd checkmate/man/checkIntegerish.Rd checkmate/man/checkMultiClass.Rd checkmate/man/makeAssertion.Rd checkmate/man/checkNamed.Rd checkmate/man/checkList.Rd checkmate/man/anyMissing.Rd checkmate/man/checkR6.Rd checkmate/man/checkAtomicVector.Rd checkmate/man/anyNaN.Rd checkmate/man/checkAtomic.Rd checkmate/man/checkInteger.Rd checkmate/man/checkDate.Rd checkmate/man/checkString.Rd checkmate/man/checkFALSE.Rd checkmate/man/makeTest.Rd checkmate/man/checkDirectoryExists.Rd checkmate/man/checkTibble.Rd checkmate/man/checkAccess.Rd checkmate/man/checkScalar.Rd checkmate/man/checkComplex.Rd checkmate/man/matchArg.Rd checkmate/man/checkPOSIXct.Rd checkmate/man/checkOS.Rd checkmate/man/checkVector.Rd checkmate/man/checkRaw.Rd checkmate/man/checkDisjunct.Rd checkmate/man/checkEnvironment.Rd checkmate/man/checkCount.Rd checkmate/man/checkNumber.Rd checkmate/man/qassertr.Rd checkmate/man/checkDataFrame.Rd checkmate/man/register_test_backend.Rd checkmate/man/checkSetEqual.Rd checkmate/man/checkNull.Rd checkmate/man/assert.Rd checkmate/man/wf.Rd checkmate/man/checkFileExists.Rd checkmate/man/checkmate-package.Rd checkmate/man/checkInt.Rd checkmate/man/checkTRUE.Rd checkmate/man/checkMatrix.Rd checkmate/man/qassert.Rd checkmate/man/checkFactor.Rd checkmate/man/checkCharacter.Rd checkmate/man/checkNames.Rd checkmate/man/checkNumeric.Rd checkmate/man/checkPathForOutput.Rd checkmate/man/checkArray.Rd checkmate/man/AssertCollection.Rd checkmate/man/asInteger.Rd checkmate/man/coalesce.Rd checkmate/man/makeExpectation.Rd checkmate/man/checkDouble.Rd checkmate/man/vname.Rd checkmate/man/checkFlag.Rd checkmate/man/checkClass.Rd checkmate/man/checkFunction.Rd checkmate/man/checkChoice.Rd checkmate/man/checkScalarNA.Rd checkmate/man/checkDataTable.Rd checkmate/man/checkLogical.Rd checkmate/man/anyInfinite.Rd checkmate/DESCRIPTION checkmate/build/ checkmate/build/vignette.rds checkmate/tests/ checkmate/tests/test-all.R checkmate/tests/testthat/ checkmate/tests/testthat/test_deparse.R checkmate/tests/testthat/test_assert.R checkmate/tests/testthat/test_checkR6.R checkmate/tests/testthat/test_checkNames.R checkmate/tests/testthat/test_interoperability.R checkmate/tests/testthat/test_anyNaN.R checkmate/tests/testthat/test_checkLogical.R checkmate/tests/testthat/test_checkDataFrame.R checkmate/tests/testthat/test_AssertCollection.R checkmate/tests/testthat/test_checkComplex.R checkmate/tests/testthat/test_checkMultiClass.R checkmate/tests/testthat/test_checkTRUE.R checkmate/tests/testthat/test_checkNumber.R checkmate/tests/testthat/test_checkFlag.R checkmate/tests/testthat/test_matchArg.R checkmate/tests/testthat/test_checkDataTable.R checkmate/tests/testthat/test_checkMatrix.R checkmate/tests/testthat/test_anyInfinite.R checkmate/tests/testthat/test_checkInt.R checkmate/tests/testthat/test_checkFactor.R checkmate/tests/testthat/setup.R checkmate/tests/testthat/test_altreps.R checkmate/tests/testthat/test_checkList.R checkmate/tests/testthat/test_asType.R checkmate/tests/testthat/test_checkFunction.R checkmate/tests/testthat/test_checkScalar.R checkmate/tests/testthat/test_checkClass.R checkmate/tests/testthat/test_qassertr.R checkmate/tests/testthat/test_checkString.R checkmate/tests/testthat/test_checkNull.R checkmate/tests/testthat/test_checkPOSIXct.R checkmate/tests/testthat/test_checkIntegerish.R checkmate/tests/testthat/test_makeFunction.R checkmate/tests/testthat/test_checkCount.R checkmate/tests/testthat/teardown.R checkmate/tests/testthat/test_guessType.R checkmate/tests/testthat/test_checkInteger.R checkmate/tests/testthat/test_checkTibble.R checkmate/tests/testthat/test_checkFALSE.R checkmate/tests/testthat/test_checkCharacter.R checkmate/tests/testthat/test_checkArray.R checkmate/tests/testthat/test_anyMissing.R checkmate/tests/testthat/test_checkVector.R checkmate/tests/testthat/test_checkDate.R checkmate/tests/testthat/test_checkSetEqual.R checkmate/tests/testthat/test_messages.R checkmate/tests/testthat/test_checkDisjunct.R checkmate/tests/testthat/test_wf.R checkmate/tests/testthat/helper.R checkmate/tests/testthat/test_checkNumeric.R checkmate/tests/testthat/test_checkFormula.R checkmate/tests/testthat/test_include.R checkmate/tests/testthat/test_checkOS.R checkmate/tests/testthat/test_checkScalarNA.R checkmate/tests/testthat/test_checkRaw.R checkmate/tests/testthat/test_qassert.R checkmate/tests/testthat/test_checkChoice.R checkmate/tests/testthat/test_checkSubset.R checkmate/tests/testthat/test_checkFilesystem.R checkmate/tests/testthat/test_checkAtomic.R checkmate/tests/testthat/test_checkDouble.R checkmate/tests/testthat/test_checkAtomicVector.R checkmate/tests/testthat/test_checkEnvironment.R checkmate/src/ checkmate/src/guess_type.c checkmate/src/backports.h checkmate/src/helper.h checkmate/src/integerish.c checkmate/src/which_first.h checkmate/src/any_infinite.c checkmate/src/is_sorted.h checkmate/src/init.c checkmate/src/any_missing.c checkmate/src/find_nchar.c checkmate/src/all_missing.c checkmate/src/any_nan.c checkmate/src/qassert.c checkmate/src/any_nan.h checkmate/src/is_sorted.c checkmate/src/integerish.h checkmate/src/guess_type.h checkmate/src/qassert.h checkmate/src/any_missing.h checkmate/src/Makevars checkmate/src/helper.c checkmate/src/all_missing.h checkmate/src/which_first.c checkmate/src/checks.c checkmate/src/any_infinite.h checkmate/src/checks.h checkmate/src/find_nchar.h checkmate/vignettes/ checkmate/vignettes/tinytest.Rmd checkmate/vignettes/checkmate.Rmd checkmate/R/ checkmate/R/checkDate.R checkmate/R/anyNaN.R checkmate/R/checkScalar.R checkmate/R/checkFlag.R checkmate/R/vname.R checkmate/R/checkR6.R checkmate/R/checkAccess.R checkmate/R/zzz.R checkmate/R/checkDisjunct.R checkmate/R/qassert.R checkmate/R/allMissing.R checkmate/R/checkAtomic.R checkmate/R/assert.R checkmate/R/checkNumeric.R checkmate/R/makeExpectation.R checkmate/R/checkFactor.R checkmate/R/checkPathForOutput.R checkmate/R/checkCount.R checkmate/R/isIntegerish.R checkmate/R/checkDataFrame.R checkmate/R/checkDataTable.R checkmate/R/checkChoice.R checkmate/R/checkEnvironment.R checkmate/R/checkIntegerish.R checkmate/R/checkFileExists.R checkmate/R/checkMatrix.R checkmate/R/checkDouble.R checkmate/R/makeAssertion.R checkmate/R/checkOS.R checkmate/R/checkScalarNA.R checkmate/R/checkList.R checkmate/R/checkComplex.R checkmate/R/checkAtomicVector.R checkmate/R/anyInfinite.R checkmate/R/anyMissing.R checkmate/R/checkPOSIXct.R checkmate/R/checkTRUE.R checkmate/R/checkInteger.R checkmate/R/asInteger.R checkmate/R/qassertr.R checkmate/R/checkNull.R checkmate/R/checkNamed.R checkmate/R/checkTibble.R checkmate/R/checkFunction.R checkmate/R/makeTest.R checkmate/R/checkFALSE.R checkmate/R/checkDirectoryExists.R checkmate/R/checkString.R checkmate/R/helper.R checkmate/R/AssertCollection.R checkmate/R/checkNames.R checkmate/R/matchArg.R checkmate/R/checkLogical.R checkmate/R/checkFormula.R checkmate/R/checkArray.R checkmate/R/checkSubset.R checkmate/R/checkNumber.R checkmate/R/coalesce.R checkmate/R/checkClass.R checkmate/R/checkSetEqual.R checkmate/R/checkInt.R checkmate/R/wfwl.R checkmate/R/checkVector.R checkmate/R/checkCharacter.R checkmate/R/checkRaw.R checkmate/R/checkMultiClass.R checkmate/NEWS.md checkmate/MD5 checkmate/inst/ checkmate/inst/doc/ checkmate/inst/doc/tinytest.R checkmate/inst/doc/tinytest.html checkmate/inst/doc/checkmate.R checkmate/inst/doc/checkmate.html checkmate/inst/doc/tinytest.Rmd checkmate/inst/doc/checkmate.Rmd checkmate/inst/include/ checkmate/inst/include/checkmate_stub.c checkmate/inst/include/checkmate.h checkmate/inst/CITATION phase `unpack' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `install' Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory * installing *source* package ‘checkmate’ ... ** package ‘checkmate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c all_missing.c -o all_missing.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c any_infinite.c -o any_infinite.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c any_missing.c -o any_missing.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c any_nan.c -o any_nan.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c checks.c -o checks.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c find_nchar.c -o find_nchar.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c guess_type.c -o guess_type.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c helper.c -o helper.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c init.c -o init.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c integerish.c -o integerish.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c is_sorted.c -o is_sorted.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c qassert.c -o qassert.o gcc -I"/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c which_first.c -o which_first.o gcc -shared -L/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/lib -L/usr/local/lib -o checkmate.so all_missing.o any_infinite.o any_missing.o any_nan.o checks.o find_nchar.o guess_type.o helper.o init.o integerish.o is_sorted.o qassert.o which_first.o -L/gnu/store/j3das66pbpfly7gxxb2051h73yj4wkab-r-minimal-4.2.1/lib/R/lib -lR installing to /gnu/store/sqwcqbgl3kb41kap7v3ys5j7gmcg3y4p-r-checkmate-2.1.0/site-library/00LOCK-checkmate/00new/checkmate/libs ** R ** inst ** tests ** byte-compile and prepare package for lazy loading Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory ** help *** installing help indices ** building package indices Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory ** installing vignettes ** testing if installed package can be loaded from temporary location Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory ** testing if installed package keeps a record of temporary installation path * DONE (checkmate) phase `install' succeeded after 9.7 seconds starting phase `check' Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Warning message: In normalizePath("~") : path[1]="/homeless-shelter": No such file or directory Testing examples for package ‘checkmate’ phase `check' succeeded after 1.4 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `make-dynamic-linker-cache' phase `make-dynamic-linker-cache' succeeded after 0.0 seconds starting phase `install-license-files' installing 1 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds