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nlme/
nlme/NAMESPACE
nlme/README
nlme/ChangeLog
nlme/LICENCE
nlme/data/
nlme/data/Muscle.rda
nlme/data/Dialyzer.rda
nlme/data/MathAchieve.rda
nlme/data/Phenobarb.rda
nlme/data/Relaxin.rda
nlme/data/Orthodont.rda
nlme/data/IGF.rda
nlme/data/Tetracycline1.rda
nlme/data/Earthquake.rda
nlme/data/PBG.rda
nlme/data/Alfalfa.rda
nlme/data/Quinidine.rda
nlme/data/Fatigue.rda
nlme/data/Oxide.rda
nlme/data/Wafer.rda
nlme/data/Pixel.rda
nlme/data/bdf.rda
nlme/data/Remifentanil.rda
nlme/data/Oxboys.rda
nlme/data/RatPupWeight.rda
nlme/data/Gasoline.rda
nlme/data/ergoStool.rda
nlme/data/BodyWeight.rda
nlme/data/Nitrendipene.rda
nlme/data/Glucose2.rda
nlme/data/Wheat.rda
nlme/data/Cefamandole.rda
nlme/data/Ovary.rda
nlme/data/Gun.rda
nlme/data/Oats.rda
nlme/data/Assay.rda
nlme/data/Tetracycline2.rda
nlme/data/MathAchSchool.rda
nlme/data/Meat.rda
nlme/data/Milk.rda
nlme/data/Machines.rda
nlme/data/Rail.rda
nlme/data/Soybean.rda
nlme/data/Glucose.rda
nlme/data/Wheat2.rda
nlme/data/Spruce.rda
nlme/man/
nlme/man/Muscle.Rd
nlme/man/Variogram.corExp.Rd
nlme/man/Names.Rd
nlme/man/plot.nmGroupedData.Rd
nlme/man/summary.nlsList.Rd
nlme/man/Milk.Rd
nlme/man/corRatio.Rd
nlme/man/varClasses.Rd
nlme/man/summary.gls.Rd
nlme/man/pdClasses.Rd
nlme/man/logLik.lmeStruct.Rd
nlme/man/nlme.Rd
nlme/man/corMatrix.corStruct.Rd
nlme/man/summary.varFunc.Rd
nlme/man/fitted.nlmeStruct.Rd
nlme/man/Gasoline.Rd
nlme/man/Fatigue.Rd
nlme/man/RatPupWeight.Rd
nlme/man/gsummary.Rd
nlme/man/logDet.Rd
nlme/man/ACF.lme.Rd
nlme/man/getData.lme.Rd
nlme/man/bdf.Rd
nlme/man/update.varFunc.Rd
nlme/man/coef.varFunc.Rd
nlme/man/plot.ranef.lmList.Rd
nlme/man/isBalanced.Rd
nlme/man/fixef.lmList.Rd
nlme/man/pdMatrix.reStruct.Rd
nlme/man/Glucose.Rd
nlme/man/Matrix.reStruct.Rd
nlme/man/Quinidine.Rd
nlme/man/augPred.Rd
nlme/man/Variogram.corRatio.Rd
nlme/man/phenoModel.Rd
nlme/man/Variogram.Rd
nlme/man/intervals.gls.Rd
nlme/man/Remifentanil.Rd
nlme/man/residuals.lmeStruct.Rd
nlme/man/asTable.Rd
nlme/man/varIdent.Rd
nlme/man/recalc.reStruct.Rd
nlme/man/quinModel.Rd
nlme/man/logDet.pdMat.Rd
nlme/man/pdNatural.Rd
nlme/man/varComb.Rd
nlme/man/nlme.nlsList.Rd
nlme/man/Ovary.Rd
nlme/man/nlmeStruct.Rd
nlme/man/coef.gnls.Rd
nlme/man/getGroups.corStruct.Rd
nlme/man/anova.lme.Rd
nlme/man/logDet.reStruct.Rd
nlme/man/random.effects.Rd
nlme/man/nlsList.selfStart.Rd
nlme/man/fitted.glsStruct.Rd
nlme/man/Initialize.lmeStruct.Rd
nlme/man/Meat.Rd
nlme/man/Matrix.Rd
nlme/man/fdHess.Rd
nlme/man/Variogram.gls.Rd
nlme/man/logLik.reStruct.Rd
nlme/man/gapply.Rd
nlme/man/Dim.pdMat.Rd
nlme/man/ranef.lme.Rd
nlme/man/pdDiag.Rd
nlme/man/varFunc.Rd
nlme/man/IGF.Rd
nlme/man/getResponse.Rd
nlme/man/coef.modelStruct.Rd
nlme/man/Gun.Rd
nlme/man/isInitialized.Rd
nlme/man/lmeObject.Rd
nlme/man/plot.ACF.Rd
nlme/man/predict.lmList.Rd
nlme/man/qqnorm.gls.Rd
nlme/man/Names.formula.Rd
nlme/man/recalc.varFunc.Rd
nlme/man/residuals.lme.Rd
nlme/man/pdConstruct.pdBlocked.Rd
nlme/man/residuals.glsStruct.Rd
nlme/man/plot.ranef.lme.Rd
nlme/man/Alfalfa.Rd
nlme/man/pdIdent.Rd
nlme/man/Assay.Rd
nlme/man/residuals.gnlsStruct.Rd
nlme/man/lmeControl.Rd
nlme/man/getGroups.gls.Rd
nlme/man/qqnorm.lme.Rd
nlme/man/getCovariate.varFunc.Rd
nlme/man/corARMA.Rd
nlme/man/corSpher.Rd
nlme/man/Orthodont.Rd
nlme/man/summary.corStruct.Rd
nlme/man/Initialize.reStruct.Rd
nlme/man/glsControl.Rd
nlme/man/Initialize.corStruct.Rd
nlme/man/corSpatial.Rd
nlme/man/plot.intervals.lmList.Rd
nlme/man/Names.pdBlocked.Rd
nlme/man/Dialyzer.Rd
nlme/man/Extract.pdMat.Rd
nlme/man/getGroups.varFunc.Rd
nlme/man/groupedData.Rd
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nlme/man/corFactor.Rd
nlme/man/coef.pdMat.Rd
nlme/man/getCovariate.Rd
nlme/man/logLik.lme.Rd
nlme/man/pdBlocked.Rd
nlme/man/Wheat2.Rd
nlme/man/pooledSD.Rd
nlme/man/needUpdate.Rd
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nlme/man/pdFactor.Rd
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nlme/man/predict.nlme.Rd
nlme/man/varWeights.Rd
nlme/man/logLik.varFunc.Rd
nlme/man/Earthquake.Rd
nlme/man/pdLogChol.Rd
nlme/man/solve.reStruct.Rd
nlme/man/getGroups.lmList.Rd
nlme/man/Wafer.Rd
nlme/man/Variogram.corLin.Rd
nlme/man/corMatrix.Rd
nlme/man/Matrix.pdMat.Rd
nlme/man/splitFormula.Rd
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nlme/man/pairs.lme.Rd
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nlme/man/getGroups.lme.Rd
nlme/man/VarCorr.Rd
nlme/man/nlmeControl.Rd
nlme/man/plot.nffGroupedData.Rd
nlme/man/LDEsysMat.Rd
nlme/man/pairs.compareFits.Rd
nlme/man/print.summary.pdMat.Rd
nlme/man/varWeights.glsStruct.Rd
nlme/man/getGroups.data.frame.Rd
nlme/man/gnlsStruct.Rd
nlme/man/asOneFormula.Rd
nlme/man/plot.augPred.Rd
nlme/man/ergoStool.Rd
nlme/man/fitted.gnlsStruct.Rd
nlme/man/logLik.glsStruct.Rd
nlme/man/getData.lmList.Rd
nlme/man/pdSymm.Rd
nlme/man/varConstPower.Rd
nlme/man/varConstProp.Rd
nlme/man/varPower.Rd
nlme/man/Spruce.Rd
nlme/man/PBG.Rd
nlme/man/coef.reStruct.Rd
nlme/man/intervals.lme.Rd
nlme/man/getGroupsFormula.Rd
nlme/man/gnlsObject.Rd
nlme/man/pairs.lmList.Rd
nlme/man/Coef.Rd
nlme/man/plot.lmList.Rd
nlme/man/corAR1.Rd
nlme/man/logLik.corStruct.Rd
nlme/man/Rail.Rd
nlme/man/Wheat.Rd
nlme/man/corNatural.Rd
nlme/man/ACF.gls.Rd
nlme/man/intervals.lmList.Rd
nlme/man/BodyWeight.Rd
nlme/man/Dim.corSpatial.Rd
nlme/man/coef.corStruct.Rd
nlme/man/predict.gnls.Rd
nlme/man/corCompSymm.Rd
nlme/man/logDet.corStruct.Rd
nlme/man/logLik.gnlsStruct.Rd
nlme/man/balancedGrouped.Rd
nlme/man/anova.gls.Rd
nlme/man/formula.pdBlocked.Rd
nlme/man/plot.gls.Rd
nlme/man/Variogram.default.Rd
nlme/man/fitted.lmList.Rd
nlme/man/Oxide.Rd
nlme/man/glsStruct.Rd
nlme/man/recalc.corStruct.Rd
nlme/man/plot.compareFits.Rd
nlme/man/Covariate.Rd
nlme/man/gls-internal.Rd
nlme/man/glsObject.Rd
nlme/man/Initialize.glsStruct.Rd
nlme/man/getData.Rd
nlme/man/lme.groupedData.Rd
nlme/man/lmList.Rd
nlme/man/Variogram.lme.Rd
nlme/man/corMatrix.pdMat.Rd
nlme/man/Glucose2.Rd
nlme/man/corLin.Rd
nlme/man/nlsList.Rd
nlme/man/residuals.gls.Rd
nlme/man/Tetracycline1.Rd
nlme/man/Soybean.Rd
nlme/man/corClasses.Rd
nlme/man/simulate.lme.Rd
nlme/man/corCAR1.Rd
nlme/man/logLik.gnls.Rd
nlme/man/Names.reStruct.Rd
nlme/man/ACF.Rd
nlme/man/Cefamandole.Rd
nlme/man/pdConstruct.Rd
nlme/man/lmeStruct.Rd
nlme/man/gnls.Rd
nlme/man/ranef.lmList.Rd
nlme/man/Tetracycline2.Rd
nlme/man/fitted.lmeStruct.Rd
nlme/man/plot.Variogram.Rd
nlme/man/nlmeObject.Rd
nlme/man/reStruct.Rd
nlme/man/Covariate.varFunc.Rd
nlme/man/getGroups.Rd
nlme/man/predict.gls.Rd
nlme/man/Nitrendipene.Rd
nlme/man/corFactor.corStruct.Rd
nlme/man/compareFits.Rd
nlme/man/Variogram.corSpatial.Rd
nlme/man/MathAchSchool.Rd
nlme/man/formula.pdMat.Rd
nlme/man/pdMat.Rd
nlme/man/Initialize.varFunc.Rd
nlme/man/varWeights.lmeStruct.Rd
nlme/man/getCovariate.data.frame.Rd
nlme/man/as.matrix.pdMat.Rd
nlme/man/collapse.groupedData.Rd
nlme/man/summary.modelStruct.Rd
nlme/man/getResponseFormula.Rd
nlme/man/corSymm.Rd
nlme/man/Pixel.Rd
nlme/man/solve.pdMat.Rd
nlme/man/lmList.groupedData.Rd
nlme/man/coef.lmList.Rd
nlme/man/logLik.lmList.Rd
nlme/man/Variogram.corGaus.Rd
nlme/man/print.varFunc.Rd
nlme/man/model.matrix.reStruct.Rd
nlme/man/Oats.Rd
nlme/man/getCovariateFormula.Rd
nlme/man/pdMatrix.Rd
nlme/man/varFixed.Rd
nlme/man/fitted.lme.Rd
nlme/man/coef.lme.Rd
nlme/man/Machines.Rd
nlme/man/corExp.Rd
nlme/man/plot.lme.Rd
nlme/man/Dim.Rd
nlme/man/needUpdate.modelStruct.Rd
nlme/man/comparePred.Rd
nlme/man/lme.Rd
nlme/man/summary.pdMat.Rd
nlme/man/residuals.lmList.Rd
nlme/man/varExp.Rd
nlme/man/corGaus.Rd
nlme/man/MathAchieve.Rd
nlme/man/recalc.Rd
nlme/man/summary.lme.Rd
nlme/man/Dim.corStruct.Rd
nlme/man/getVarCov.Rd
nlme/man/gls.Rd
nlme/man/Initialize.Rd
nlme/man/Relaxin.Rd
nlme/man/summary.lmList.Rd
nlme/man/residuals.nlmeStruct.Rd
nlme/man/allCoef.Rd
nlme/man/Phenobarb.Rd
nlme/man/as.matrix.corStruct.Rd
nlme/man/recalc.modelStruct.Rd
nlme/man/getCovariate.corStruct.Rd
nlme/man/Variogram.corSpher.Rd
nlme/man/predict.lme.Rd
nlme/man/gnlsControl.Rd
nlme/man/fixed.effects.Rd
nlme/man/Oxboys.Rd
nlme/man/Names.pdMat.Rd
nlme/man/pdFactor.reStruct.Rd
nlme/TODO
nlme/DESCRIPTION
nlme/build/
nlme/build/partial.rdb
nlme/tests/
nlme/tests/anova.gls.R
nlme/tests/deviance.R
nlme/tests/lme.R
nlme/tests/updateLme.R
nlme/tests/deparse.R
nlme/tests/coef.Rout.save
nlme/tests/nlme2.R
nlme/tests/gnls-ch8.R
nlme/tests/data.frame.R
nlme/tests/nlme.R
nlme/tests/missing.R
nlme/tests/lme.Rout.save
nlme/tests/augPredmissing.R
nlme/tests/predict.lme.R
nlme/tests/gls.R
nlme/tests/getVarCov.R
nlme/tests/getData.R
nlme/tests/varIdent.R
nlme/tests/missing.Rout.save
nlme/tests/ss2.rds
nlme/tests/contrMat.R
nlme/tests/sigma-fixed-etc.R
nlme/tests/lmList.R
nlme/tests/varConstProp.R
nlme/tests/fitted.R
nlme/tests/coef.R
nlme/tests/corFactor.R
nlme/tests/augPred_lab.R
nlme/tests/nlme-stall.R
nlme/src/
nlme/src/nlmefit.c
nlme/src/matrix.h
nlme/src/nlmefit.h
nlme/src/pdMat.h
nlme/src/init.c
nlme/src/pdMat.c
nlme/src/gnls.c
nlme/src/Makevars
nlme/src/rs.f
nlme/src/pythag.c
nlme/src/matrix.c
nlme/src/chol.f
nlme/src/nlme.c
nlme/src/base.h
nlme/src/corStruct.c
nlme/src/nlOptimizer.c
nlme/src/nlOptimizer.h
nlme/R/
nlme/R/newMethods.R
nlme/R/lme.R
nlme/R/newGenerics.R
nlme/R/VarCorr.R
nlme/R/VarCov.R
nlme/R/simulate.R
nlme/R/nlme.R
nlme/R/gls.R
nlme/R/modelStruct.R
nlme/R/reStruct.R
nlme/R/pdMat.R
nlme/R/zzMethods.R
nlme/R/varFunc.R
nlme/R/nlsList.R
nlme/R/gnls.R
nlme/R/lmList.R
nlme/R/newFunc.R
nlme/R/corStruct.R
nlme/R/groupedData.R
nlme/MD5
nlme/inst/
nlme/inst/CITATION
nlme/inst/mlbook/
nlme/inst/mlbook/README
nlme/inst/mlbook/ch04.R
nlme/inst/mlbook/ch05.R
nlme/inst/po/
nlme/inst/po/ko/
nlme/inst/po/ko/LC_MESSAGES/
nlme/inst/po/ko/LC_MESSAGES/R-nlme.mo
nlme/inst/po/ko/LC_MESSAGES/nlme.mo
nlme/inst/po/fr/
nlme/inst/po/fr/LC_MESSAGES/
nlme/inst/po/fr/LC_MESSAGES/R-nlme.mo
nlme/inst/po/fr/LC_MESSAGES/nlme.mo
nlme/inst/po/de/
nlme/inst/po/de/LC_MESSAGES/
nlme/inst/po/de/LC_MESSAGES/R-nlme.mo
nlme/inst/po/de/LC_MESSAGES/nlme.mo
nlme/inst/po/pl/
nlme/inst/po/pl/LC_MESSAGES/
nlme/inst/po/pl/LC_MESSAGES/R-nlme.mo
nlme/inst/po/pl/LC_MESSAGES/nlme.mo
nlme/inst/po/en@quot/
nlme/inst/po/en@quot/LC_MESSAGES/
nlme/inst/po/en@quot/LC_MESSAGES/R-nlme.mo
nlme/inst/po/en@quot/LC_MESSAGES/nlme.mo
nlme/inst/scripts/
nlme/inst/scripts/ch03.R
nlme/inst/scripts/ch01.R
nlme/inst/scripts/runme.R
nlme/inst/scripts/ch04.R
nlme/inst/scripts/ch05.R
nlme/inst/scripts/ch08.R
nlme/inst/scripts/ch06.R
nlme/inst/scripts/ch02.R
nlme/inst/scripts/sims.rda
nlme/po/
nlme/po/R-nlme.pot
nlme/po/nlme.pot
nlme/po/R-ko.po
nlme/po/pl.po
nlme/po/ko.po
nlme/po/R-pl.po
nlme/po/R-de.po
nlme/po/R-fr.po
nlme/po/de.po
nlme/po/fr.po
phase `unpack' succeeded after 0.1 seconds
starting phase `patch-usr-bin-file'
phase `patch-usr-bin-file' succeeded after 0.0 seconds
starting phase `patch-source-shebangs'
phase `patch-source-shebangs' succeeded after 0.1 seconds
starting phase `patch-generated-file-shebangs'
phase `patch-generated-file-shebangs' succeeded after 0.0 seconds
starting phase `install'
* installing *source* package ‘nlme’ ...
** package ‘nlme’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -c chol.f -o chol.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c corStruct.c -o corStruct.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c gnls.c -o gnls.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c init.c -o init.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c matrix.c -o matrix.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c nlOptimizer.c -o nlOptimizer.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c nlme.c -o nlme.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c nlmefit.c -o nlmefit.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c pdMat.c -o pdMat.o
gcc -I"/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/include" -DNDEBUG   -I/usr/local/include  -fvisibility=hidden -fpic  -g -O2  -c pythag.c -o pythag.o
gfortran -fno-optimize-sibling-calls  -fpic  -g -O2  -c rs.f -o rs.o
gcc -shared -L/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/lib -L/usr/local/lib -o nlme.so chol.o corStruct.o gnls.o init.o matrix.o nlOptimizer.o nlme.o nlmefit.o pdMat.o pythag.o rs.o -L/gnu/store/4222gbmymk9fhwly66zj6ap8lx9aj76z-gfortran-7.5.0-lib/lib/gcc/aarch64-unknown-linux-gnu/7.5.0 -L/gnu/store/4222gbmymk9fhwly66zj6ap8lx9aj76z-gfortran-7.5.0-lib/lib -lgfortran -lm -L/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib/R/lib -lR
installing to /gnu/store/v7v4snrnlks6iam086l3ppa8ny8lm1mk-r-nlme-3.1-152/site-library/00LOCK-nlme/00new/nlme/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (nlme)
phase `install' succeeded after 50.6 seconds
starting phase `check'
Testing examples for package ‘nlme’
phase `check' succeeded after 92.1 seconds
starting phase `patch-shebangs'
phase `patch-shebangs' succeeded after 0.0 seconds
starting phase `strip'
phase `strip' succeeded after 0.0 seconds
starting phase `validate-runpath'
phase `validate-runpath' succeeded after 0.0 seconds
starting phase `validate-documentation-location'
phase `validate-documentation-location' succeeded after 0.0 seconds
starting phase `delete-info-dir-file'
phase `delete-info-dir-file' succeeded after 0.0 seconds
starting phase `patch-dot-desktop-files'
phase `patch-dot-desktop-files' succeeded after 0.0 seconds
starting phase `install-license-files'
installing 1 license files from '.'
phase `install-license-files' succeeded after 0.0 seconds
starting phase `reset-gzip-timestamps'
phase `reset-gzip-timestamps' succeeded after 0.0 seconds
starting phase `compress-documentation'
phase `compress-documentation' succeeded after 0.0 seconds