WARNING: (guile-user): imported module (guix build utils) overrides core binding `delete' starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/ggfdxvdgbrjvg2cx3mm7yv5j1y433b01-tar-1.32/bin:/gnu/store/ink6zpk9adb2k2w6a0qif3d45vazl7dv-gzip-1.10/bin:/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/bin:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/bin:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/bin:/gnu/store/yl67anl7279qzrd3kxzj97541jzr2k3d-diffutils-3.7/bin:/gnu/store/w5n1p8kj9zn4zmjhr0bjbknakxij67w2-patch-2.7.6/bin:/gnu/store/x03dmf3xhi3il3mx383zpl4zic38iz1p-findutils-4.7.0/bin:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/bin:/gnu/store/wk5vdnms96n2iqfpqyg9gl5lhg8vdc32-sed-4.8/bin:/gnu/store/f3qp8l7f6kmfrvwnyix35kax2lv7lmnb-grep-3.4/bin:/gnu/store/wiv74mq31s0vppzm99qwnjkd8xa3albw-coreutils-8.32/bin:/gnu/store/j7fqszmnydxix8l35d7l3b7dj44qjrw4-make-4.3/bin:/gnu/store/7sfbiqh21h90bc6zi8br1xh60m6qgdd5-bash-minimal-5.0.16/bin:/gnu/store/5m8wvcahy3dgpyhxlq5aq85zbvh5jqfz-ld-wrapper-0/bin:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/bin:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/bin:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/bin:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/sbin' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/include:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/include:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/include:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/include:/gnu/store/j7fqszmnydxix8l35d7l3b7dj44qjrw4-make-4.3/include:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/include:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/include:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/include:/gnu/store/nkpdg3jwllrsh7wbkzgflkcpyjn5wp0q-linux-libre-headers-5.4.20/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/include:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/include:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/include:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/include:/gnu/store/j7fqszmnydxix8l35d7l3b7dj44qjrw4-make-4.3/include:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/include:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/include/c++:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/include:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/include:/gnu/store/nkpdg3jwllrsh7wbkzgflkcpyjn5wp0q-linux-libre-headers-5.4.20/include' environment variable `LIBRARY_PATH' set to `/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/lib:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/lib:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/lib:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/lib:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/lib:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/lib:/gnu/store/z7hanmdmdalqh1v0y7z8ilinfhyfh91d-glibc-2.31-static/lib:/gnu/store/4xjcx6g4i229hzzqpqak6vw9bvqh88gi-glibc-utf8-locales-2.31/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/4xjcx6g4i229hzzqpqak6vw9bvqh88gi-glibc-utf8-locales-2.31/lib/locale' phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/LICENSE.txt' -> `./LICENSE.txt' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/Makefile' -> `./Makefile' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/README.md' -> `./README.md' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/SAMBLASTER_Supplemental.pdf' -> `./SAMBLASTER_Supplemental.pdf' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/samblaster.cpp' -> `./samblaster.cpp' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/sbhash.cpp' -> `./sbhash.cpp' `/gnu/store/x084qkp0dhrf337jxvh04z8xi6nzs3ph-samblaster-0.1.24-checkout/sbhash.h' -> `./sbhash.h' phase `unpack' succeeded after 0.0 seconds starting phase `bootstrap' no 'configure.ac' or anything like that, doing nothing phase `bootstrap' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `build' g++ -Wall -O3 -D BUILDNUM=24 -c samblaster.cpp -o samblaster.o g++ -Wall -O3 -D BUILDNUM=24 -c sbhash.cpp -o sbhash.o samblaster.cpp:1605:29: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Output %"PRIu64" discordant read pairs to %s\n", discCount/2, state->discordantFileName); ^ samblaster.cpp:1607:29: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Output %"PRIu64" split reads to %s\n", splitCount, state->splitterFileName); ^ samblaster.cpp:1609:29: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Output %"PRIu64" unmapped/clipped reads to %s\n", unmapClipCount, state->unmappedClippedFileName); ^ samblaster.cpp:1615:25: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Found %"PRIu64" of %"PRIu64" (%4.2f%%) read ids unmated\n", ^ samblaster.cpp:1615:52: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Found %"PRIu64" of %"PRIu64" (%4.2f%%) read ids unmated\n", ^ samblaster.cpp:1621:25: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Removed %"PRIu64" of %"PRIu64" (%4.2f%%) read ids as duplicates", ^ samblaster.cpp:1621:54: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Removed %"PRIu64" of %"PRIu64" (%4.2f%%) read ids as duplicates", ^ samblaster.cpp:1626:25: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Marked %"PRIu64" of %"PRIu64" (%4.2f%%) read ids as duplicates", ^ samblaster.cpp:1626:53: warning: invalid suffix on literal; C++11 requires a space between literal and string macro [-Wliteral-suffix] fprintf(stderr, "samblaster: Marked %"PRIu64" of %"PRIu64" (%4.2f%%) read ids as duplicates", ^ g++ -o samblaster samblaster.o sbhash.o phase `build' succeeded after 2.3 seconds starting phase `check' test suite not run phase `check' succeeded after 0.0 seconds starting phase `install' phase `install' succeeded after 0.0 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' stripping binaries in "/gnu/store/g4gpdpixll3yk90rni3a92wggfhb85yw-samblaster-0.1.24/bin" with "strip" and flags ("--strip-debug" "--enable-deterministic-archives") phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' validating RUNPATH of 1 binaries in "/gnu/store/g4gpdpixll3yk90rni3a92wggfhb85yw-samblaster-0.1.24/bin"... phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `install-license-files' installing 1 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds