starting phase `set-SOURCE-DATE-EPOCH'
phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds
starting phase `set-paths'
environment variable `PATH' set to `/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/bin:/gnu/store/6a3ymy9vbaygwsldw8irz33kyy0aw98z-tar-1.34/bin:/gnu/store/rzp5398xvpp7spisgb2790179gz46v8s-gzip-1.10/bin:/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/bin:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/bin:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/bin:/gnu/store/h8kf32n95mslqmb03j56r83qlnf85b23-diffutils-3.8/bin:/gnu/store/qs2mw307zfqrr9fngw9akkswnmqn1sca-patch-2.7.6/bin:/gnu/store/mgxsj8hplxszwygmxq6hgcn8pdrk9r4g-findutils-4.8.0/bin:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/bin:/gnu/store/gr9y4r21rqwy035a2z76i33apgav00iw-sed-4.8/bin:/gnu/store/q5xg9jg7gr38zpifjd425aj63nlsknz2-grep-3.6/bin:/gnu/store/xlah6by49301sbsf6h3skzm6lfi8g9xw-coreutils-8.32/bin:/gnu/store/l8jy7fdsy52wwf4zqwc6ddw66dhsiapq-make-4.3/bin:/gnu/store/r7fs2zhzy8839mr3rmkxg68bwzaf9b9s-bash-minimal-5.1.8/bin:/gnu/store/fz84qfpsm932j8jsgbav5ycv7fvn7pkj-ld-wrapper-0/bin:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/bin:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/bin:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/bin:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/sbin:/gnu/store/8611ad5m81ws7qjb5z2jgsa8x9wqgbs1-curl-7.79.1/bin'
environment variable `R_LIBS_SITE' set to `/gnu/store/c6jsblgrksygpxr0w15xxh2mj6yl2md4-r-bsgenome-1.62.0/site-library/:/gnu/store/f1agrz7k8hcjnvgr82gwvrfbh1s6f8gd-r-bsgenome-dmelanogaster-ucsc-dm3-1.4.0/site-library/:/gnu/store/0i99zdvqs61l99bbax00ws0vmhpcjd51-r-xvector-0.34.0/site-library/:/gnu/store/y31dbv8gajl6da2a325kwb1q8v05y31l-r-s4vectors-0.32.3/site-library/:/gnu/store/f6myl78amj6l98vywajd0wb5x3lvapw1-r-rtracklayer-1.54.0/site-library/:/gnu/store/b2f1c185vqz64hcqlgfnadvarg14ldk4-r-rsamtools-2.10.0/site-library/:/gnu/store/fbwrjpipvdkx7f0v402j0xp7hz281qcf-r-matrixstats-0.61.0/site-library/:/gnu/store/y50r9arq9zg7lnj8crpg17gh92ia29hb-r-iranges-2.28.0/site-library/:/gnu/store/m8rj0gy36s297253cvxpvsn1641qjg52-r-genomicranges-1.46.1/site-library/:/gnu/store/zw57dfr0qkxj9y5z8jzcaaa0zfn0wb6f-r-genomeinfodb-1.30.0/site-library/:/gnu/store/nxir9gyqaxr1snpvy23b23fka5z0lj9l-r-biostrings-2.62.0/site-library/:/gnu/store/c1i5cr277y024ny19c125b4ivy4lkiza-r-biocgenerics-0.40.0/site-library/:/gnu/store/9c3xwchfrpsa6wk9ynv9ry9l1kg47540-r-zlibbioc-1.40.0/site-library/:/gnu/store/2chv3mvk1qcpn1ki8s7jkqpz6x54bdwy-r-xml-3.99-0.8/site-library/:/gnu/store/12ihn1zhwryxycgql5kg1gix8w93ig7x-r-restfulr-0.0.13/site-library/:/gnu/store/ls641841hm898byrvvhfnvsxp9nl2si0-r-rcurl-1.95-0.1.2/site-library/:/gnu/store/nzzd1c9ybg4z9va196b6jhcxajyy80l9-r-genomicalignments-1.30.0/site-library/:/gnu/store/255rfw1m7nln544a3qbrp6zjh625vlp8-r-biocio-1.4.0/site-library/:/gnu/store/z2q1xykp0l4yqq0ndqfkmq4iwhjplhcp-r-rhtslib-1.26.0/site-library/:/gnu/store/4hcc4584j9m0zq98g43jyg4x01z3mjkc-r-bitops-1.0-7/site-library/:/gnu/store/5m3w5gklgzfx5dvhkbxl7vv36g8812ca-r-biocparallel-1.28.3/site-library/:/gnu/store/rw4lan2j04gysfn8qfjs497xy339xjq8-r-genomeinfodbdata-1.2.0/site-library/:/gnu/store/iwiqd1fjbi1s3ma7vc7kmz9qkkcng43d-r-crayon-1.4.2/site-library/:/gnu/store/j464k75fb28sbik4jr7bjivndq82im1n-r-yaml-2.2.1/site-library/:/gnu/store/wmlqwq3swmvfpjm87r1bn1nsbc1j43lk-r-rjson-0.2.20/site-library/:/gnu/store/a15zd9s2dqzalfxk0fcz4x9lcr2cclb5-r-summarizedexperiment-1.24.0/site-library/:/gnu/store/fmajdk71bmbm4aibh0rjwb03ly6mygib-r-bh-1.78.0-0/site-library/:/gnu/store/6a3cf1hhrblchwi87395rk4i16h4b0ac-r-snow-0.4-4/site-library/:/gnu/store/cim377709c910wl65smwyybk58xwlgk9-r-futile-logger-1.4.3/site-library/:/gnu/store/i8m6nvfdzvzp2zpzacgkwpx9w4xycx2f-r-matrixgenerics-1.6.0/site-library/:/gnu/store/hpiqyvlcldy2k92gimjk5b5256jw02vw-r-matrix-1.4-0/site-library/:/gnu/store/hf9f0ig64f7bb52204911zm1apv9ps70-r-delayedarray-0.20.0/site-library/:/gnu/store/1m08j222sjf7z549h3c2db9fl50hvgqn-r-biobase-2.54.0/site-library/:/gnu/store/k0rm0nz9wj9nmivc6llr11s60knvqbyj-r-lambda-r-1.2.4/site-library/:/gnu/store/lr0vbgpr59majb2r0h0qnr9k0wxqcwcn-r-futile-options-1.0.1/site-library/:/gnu/store/72w9lgmm0wllx5xwwf1h2iflwpi48a2n-r-lattice-0.20-45/site-library/:/gnu/store/4jghxwsx977fy4vkd0ld5b00l8799adj-r-formatr-1.11/site-library/'
environment variable `BASH_LOADABLES_PATH' unset
environment variable `C_INCLUDE_PATH' set to `/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/include:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/include:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/include:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/include:/gnu/store/l8jy7fdsy52wwf4zqwc6ddw66dhsiapq-make-4.3/include:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/include:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/include:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/include:/gnu/store/qkg8bndfinrvfs4798lhvchgh7j3sn9s-linux-libre-headers-5.10.35/include:/gnu/store/gqbm2ay45mp32cs8p5f69r9wlda5jf5v-zlib-1.2.11/include:/gnu/store/8611ad5m81ws7qjb5z2jgsa8x9wqgbs1-curl-7.79.1/include'
environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/include:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/include:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/include:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/include:/gnu/store/l8jy7fdsy52wwf4zqwc6ddw66dhsiapq-make-4.3/include:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/include:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/include/c++:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/include:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/include:/gnu/store/qkg8bndfinrvfs4798lhvchgh7j3sn9s-linux-libre-headers-5.10.35/include:/gnu/store/gqbm2ay45mp32cs8p5f69r9wlda5jf5v-zlib-1.2.11/include:/gnu/store/8611ad5m81ws7qjb5z2jgsa8x9wqgbs1-curl-7.79.1/include'
environment variable `LIBRARY_PATH' set to `/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib:/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/lib:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/lib:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/lib:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/lib:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/lib:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/lib:/gnu/store/y7dwdckw1rzmhqfc8g6cgi71afmdql0z-glibc-2.33-static/lib:/gnu/store/k35qrb0himksbl5qh44sw66vmx3gxmkr-glibc-utf8-locales-2.33/lib:/gnu/store/gqbm2ay45mp32cs8p5f69r9wlda5jf5v-zlib-1.2.11/lib:/gnu/store/8611ad5m81ws7qjb5z2jgsa8x9wqgbs1-curl-7.79.1/lib'
environment variable `GUIX_LOCPATH' set to `/gnu/store/k35qrb0himksbl5qh44sw66vmx3gxmkr-glibc-utf8-locales-2.33/lib/locale'
environment variable `SSL_CERT_DIR' unset
environment variable `SSL_CERT_FILE' unset
environment variable `CURL_CA_BUNDLE' unset
phase `set-paths' succeeded after 0.0 seconds
starting phase `install-locale'
using 'en_US.utf8' locale for category "LC_ALL"
phase `install-locale' succeeded after 0.0 seconds
starting phase `unpack'
BSgenome.Dmelanogaster.UCSC.dm3.masked/DESCRIPTION
BSgenome.Dmelanogaster.UCSC.dm3.masked/NAMESPACE
BSgenome.Dmelanogaster.UCSC.dm3.masked/R/
BSgenome.Dmelanogaster.UCSC.dm3.masked/R/zzz.R
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr2L.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr2LHet.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr2R.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr2RHet.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr3L.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr3LHet.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr3R.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr3RHet.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chr4.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chrM.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chrU.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chrUextra.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chrX.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chrXHet.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/inst/extdata/chrYHet.masks.rda
BSgenome.Dmelanogaster.UCSC.dm3.masked/man/
BSgenome.Dmelanogaster.UCSC.dm3.masked/man/package.Rd
phase `unpack' succeeded after 0.0 seconds
starting phase `patch-usr-bin-file'
phase `patch-usr-bin-file' succeeded after 0.0 seconds
starting phase `patch-source-shebangs'
phase `patch-source-shebangs' succeeded after 0.0 seconds
starting phase `patch-generated-file-shebangs'
phase `patch-generated-file-shebangs' succeeded after 0.0 seconds
starting phase `install'
* installing *source* package ‘BSgenome.Dmelanogaster.UCSC.dm3.masked’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BSgenome.Dmelanogaster.UCSC.dm3.masked)
phase `install' succeeded after 40.1 seconds
starting phase `check'
phase `check' succeeded after 0.0 seconds
starting phase `patch-shebangs'
phase `patch-shebangs' succeeded after 0.0 seconds
starting phase `strip'
phase `strip' succeeded after 0.0 seconds
starting phase `validate-runpath'
phase `validate-runpath' succeeded after 0.0 seconds
starting phase `validate-documentation-location'
phase `validate-documentation-location' succeeded after 0.0 seconds
starting phase `delete-info-dir-file'
phase `delete-info-dir-file' succeeded after 0.0 seconds
starting phase `patch-dot-desktop-files'
phase `patch-dot-desktop-files' succeeded after 0.0 seconds
starting phase `make-dynamic-linker-cache'
phase `make-dynamic-linker-cache' succeeded after 0.0 seconds
starting phase `install-license-files'
installing 0 license files from '.'
phase `install-license-files' succeeded after 0.0 seconds
starting phase `reset-gzip-timestamps'
phase `reset-gzip-timestamps' succeeded after 0.0 seconds
starting phase `compress-documentation'
phase `compress-documentation' succeeded after 0.0 seconds