WARNING: (guile-user): imported module (guix build utils) overrides core binding `delete' starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/bin:/gnu/store/3ybmf05adh3zn477mn9av44ni48y13gi-binutils-cross-i586-pc-gnu-2.34/bin:/gnu/store/v6f44zccwh9z5zk3pjlywjybbi8n2hjh-tar-1.32/bin:/gnu/store/ncydgq2znms5n1d2k5yqshhf58nsixwv-gzip-1.10/bin:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/bin:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/bin:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/bin:/gnu/store/n4n560pfvvw50a9369axw5vj5rrqfj1n-diffutils-3.7/bin:/gnu/store/cd5qf3kcnlq35p9k392pjdpdzpsnds70-patch-2.7.6/bin:/gnu/store/hic7snhayfl7m6cpfqqr73nmm19bpqkg-findutils-4.7.0/bin:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/bin:/gnu/store/ishk7fswcs4gkwcp8mh788z4mvvl9bxh-sed-4.8/bin:/gnu/store/bhs4rj58v8j1narb2454raan2ps38xd8-grep-3.4/bin:/gnu/store/57xj5gcy1jbl9ai2lnrqnpr0dald9i65-coreutils-8.32/bin:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/bin:/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin:/gnu/store/mpa04aq8lblbcviyxywxcsb1zbi0mf39-ld-wrapper-0/bin:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/bin:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/bin:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/sbin' environment variable `CROSS_LIBRARY_PATH' set to `/gnu/store/hjlhwalczpmw1l93d5j6v63m57q6a5nq-perl-5.30.2/lib:/gnu/store/iwpfpj7jsnp077c0az0bq2ad1sg09mpd-glibc-cross-i586-pc-gnu-2.31/lib:/gnu/store/5syrw9rra8aa7bm21b4ci4c8ahhw6prg-glibc-cross-i586-pc-gnu-2.31-static/lib:/gnu/store/04jhfdnvv3k7ni899g7pssc57j75jbn3-hurd-core-headers-cross-i586-pc-gnu-0.9-1.91a5167/lib' environment variable `CROSS_C_INCLUDE_PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include:/gnu/store/iwpfpj7jsnp077c0az0bq2ad1sg09mpd-glibc-cross-i586-pc-gnu-2.31/include:/gnu/store/04jhfdnvv3k7ni899g7pssc57j75jbn3-hurd-core-headers-cross-i586-pc-gnu-0.9-1.91a5167/include' environment variable `CROSS_CPLUS_INCLUDE_PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include/c++:/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include:/gnu/store/iwpfpj7jsnp077c0az0bq2ad1sg09mpd-glibc-cross-i586-pc-gnu-2.31/include:/gnu/store/04jhfdnvv3k7ni899g7pssc57j75jbn3-hurd-core-headers-cross-i586-pc-gnu-0.9-1.91a5167/include' environment variable `CROSS_OBJC_INCLUDE_PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include:/gnu/store/iwpfpj7jsnp077c0az0bq2ad1sg09mpd-glibc-cross-i586-pc-gnu-2.31/include:/gnu/store/04jhfdnvv3k7ni899g7pssc57j75jbn3-hurd-core-headers-cross-i586-pc-gnu-0.9-1.91a5167/include' environment variable `CROSS_OBJCPLUS_INCLUDE_PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include:/gnu/store/iwpfpj7jsnp077c0az0bq2ad1sg09mpd-glibc-cross-i586-pc-gnu-2.31/include:/gnu/store/04jhfdnvv3k7ni899g7pssc57j75jbn3-hurd-core-headers-cross-i586-pc-gnu-0.9-1.91a5167/include' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include:/gnu/store/3ybmf05adh3zn477mn9av44ni48y13gi-binutils-cross-i586-pc-gnu-2.34/include:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include/c++:/gnu/store/vrjalg510ylw2s90i0ywv5w3jrvw6yqi-gcc-cross-i586-pc-gnu-7.5.0/include:/gnu/store/3ybmf05adh3zn477mn9av44ni48y13gi-binutils-cross-i586-pc-gnu-2.34/include:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/include:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/include:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/include:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/include:/gnu/store/hm40bxnv8jxmbc1lpb7zfimii4xm9m81-make-4.3/include:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/include:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include/c++:/gnu/store/rn75fm7adgx3pw5j8pg3bczfqq1y17lk-gcc-7.5.0/include:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/include:/gnu/store/gfapkk5c6hvl1d94m4sqnhn7f9l5gqyh-linux-libre-headers-5.4.20/include' environment variable `LIBRARY_PATH' set to `/gnu/store/3ybmf05adh3zn477mn9av44ni48y13gi-binutils-cross-i586-pc-gnu-2.34/lib:/gnu/store/i8h2pcxqdq07ijm3ibkka8f4smn1w48v-bzip2-1.0.8/lib:/gnu/store/9860f1abqj8wjjnwl8a9v54pdcc3bhgf-xz-5.2.4/lib:/gnu/store/60g7r3l01fd7c58yjbm6krgcwj1jkpwg-file-5.38/lib:/gnu/store/swqdvwri9dbv6zssg6v0by7l05hd6wxp-gawk-5.0.1/lib:/gnu/store/m1z7cdbqsqyp9xnjw5cvlb4a7gkcg3m4-binutils-2.34/lib:/gnu/store/fa6wj5bxkj5ll1d7292a70knmyl7a0cr-glibc-2.31/lib:/gnu/store/s3dcqzwqaakv1yx37by9chksdbkgih17-glibc-2.31-static/lib:/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/hwcky7446s952w0mwchhmm211ll07zrq-glibc-utf8-locales-2.31/lib/locale' environment variable `PERL5LIB' unset phase `set-paths' succeeded after 0.1 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/.travis.yml' -> `./.travis.yml' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/CMakeLists.txt' -> `./CMakeLists.txt' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/CHANGELOG.md' -> `./CHANGELOG.md' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/LICENSE' -> `./LICENSE' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/README.md' -> `./README.md' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/install_kraken2.sh' -> `./install_kraken2.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/.gitignore' -> `./.gitignore' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/compact_hash.cc' -> `./src/compact_hash.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/dump_table.cc' -> `./src/dump_table.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/lookup_accession_numbers.cc' -> `./src/lookup_accession_numbers.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/taxonomy.cc' -> `./src/taxonomy.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/CMakeLists.txt' -> `./src/CMakeLists.txt' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/kv_store.h' -> `./src/kv_store.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/mmscanner.h' -> `./src/mmscanner.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/compact_hash.h' -> `./src/compact_hash.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/taxonomy.h' -> `./src/taxonomy.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/aa_translate.cc' -> `./src/aa_translate.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/hyperloglogplus-bias.h' -> `./src/hyperloglogplus-bias.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/Makefile' -> `./src/Makefile' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/kraken2_data.h' -> `./src/kraken2_data.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/omp_hack.cc' -> `./src/omp_hack.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/reports.cc' -> `./src/reports.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/readcounts.h' -> `./src/readcounts.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/hyperloglogplus.cc' -> `./src/hyperloglogplus.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/utilities.h' -> `./src/utilities.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/estimate_capacity.cc' -> `./src/estimate_capacity.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/kraken2_headers.h' -> `./src/kraken2_headers.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/mmap_file.h' -> `./src/mmap_file.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/hyperloglogplus.h' -> `./src/hyperloglogplus.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/mmscanner.cc' -> `./src/mmscanner.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/reports.h' -> `./src/reports.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/mmtest.cc' -> `./src/mmtest.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/utilities.cc' -> `./src/utilities.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/seqreader.cc' -> `./src/seqreader.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/aa_translate.h' -> `./src/aa_translate.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/omp_hack.h' -> `./src/omp_hack.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/mmap_file.cc' -> `./src/mmap_file.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/classify.cc' -> `./src/classify.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/seqreader.h' -> `./src/seqreader.h' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/src/build_db.cc' -> `./src/build_db.cc' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/add_to_library.sh' -> `./scripts/add_to_library.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/download_genomic_library.sh' -> `./scripts/download_genomic_library.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/kraken2lib.pm' -> `./scripts/kraken2lib.pm' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/kraken2-inspect' -> `./scripts/kraken2-inspect' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/rsync_from_ncbi.pl' -> `./scripts/rsync_from_ncbi.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/mask_low_complexity.sh' -> `./scripts/mask_low_complexity.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/standard_installation.sh' -> `./scripts/standard_installation.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/kraken2-build' -> `./scripts/kraken2-build' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/download_taxonomy.sh' -> `./scripts/download_taxonomy.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/clean_db.sh' -> `./scripts/clean_db.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/build_gg_taxonomy.pl' -> `./scripts/build_gg_taxonomy.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/build_silva_taxonomy.pl' -> `./scripts/build_silva_taxonomy.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/build_rdp_taxonomy.pl' -> `./scripts/build_rdp_taxonomy.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/build_kraken2_db.sh' -> `./scripts/build_kraken2_db.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/make_seqid2taxid_map.pl' -> `./scripts/make_seqid2taxid_map.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/cp_into_tempfile.pl' -> `./scripts/cp_into_tempfile.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/kraken2' -> `./scripts/kraken2' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/16S_rdp_installation.sh' -> `./scripts/16S_rdp_installation.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/16S_gg_installation.sh' -> `./scripts/16S_gg_installation.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/scan_fasta_file.pl' -> `./scripts/scan_fasta_file.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/lookup_accession_numbers.pl' -> `./scripts/lookup_accession_numbers.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/scripts/16S_silva_installation.sh' -> `./scripts/16S_silva_installation.sh' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/HIV_1.fa' -> `./data/HIV_1.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/nodes.dmp' -> `./data/nodes.dmp' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/FluB.fa' -> `./data/FluB.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/FluA_H3N2.fa' -> `./data/FluA_H3N2.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/simulator.pl' -> `./data/simulator.pl' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/COVID_19.fa' -> `./data/COVID_19.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/HIV_2.fa' -> `./data/HIV_2.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/README.md' -> `./data/README.md' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/FluA_H1N1.fa' -> `./data/FluA_H1N1.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/SARS.fa' -> `./data/SARS.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/Lambda.fa' -> `./data/Lambda.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/MERS.fa' -> `./data/MERS.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/names.dmp' -> `./data/names.dmp' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/data/FluA_H2N2.fa' -> `./data/FluA_H2N2.fa' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/MANUAL.markdown' -> `./docs/MANUAL.markdown' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/Makefile' -> `./docs/Makefile' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/MANUAL.html' -> `./docs/MANUAL.html' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/head.html' -> `./docs/head.html' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/bar-bg.png' -> `./docs/bar-bg.png' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/kraken.css' -> `./docs/kraken.css' `/gnu/store/1ardgc030mi471nbq0y379jm5lz6293j-kraken2-2.1.1-checkout/docs/top.html' -> `./docs/top.html' phase `unpack' succeeded after 0.0 seconds starting phase `bootstrap' no 'configure.ac' or anything like that, doing nothing phase `bootstrap' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' patch-shebang: ./data/simulator.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./install_kraken2.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/16S_gg_installation.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/16S_rdp_installation.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/16S_silva_installation.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/add_to_library.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/build_gg_taxonomy.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/build_kraken2_db.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/build_rdp_taxonomy.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/build_silva_taxonomy.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/clean_db.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/cp_into_tempfile.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/download_genomic_library.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/download_taxonomy.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/kraken2: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/kraken2-build: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/kraken2-inspect: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/lookup_accession_numbers.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/make_seqid2taxid_map.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/mask_low_complexity.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' patch-shebang: ./scripts/rsync_from_ncbi.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/scan_fasta_file.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/standard_installation.sh: changing `/bin/bash' to `/gnu/store/pwcp239kjf7lnj5i4lkdzcfcxwcfyk72-bash-minimal-5.0.16/bin/bash' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' patch-shebang: ./data/simulator.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/build_gg_taxonomy.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/build_rdp_taxonomy.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/build_silva_taxonomy.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/cp_into_tempfile.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/kraken2: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/kraken2-build: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/kraken2-inspect: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/lookup_accession_numbers.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/make_seqid2taxid_map.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/rsync_from_ncbi.pl: warning: no binary for interpreter `perl' found in $PATH patch-shebang: ./scripts/scan_fasta_file.pl: warning: no binary for interpreter `perl' found in $PATH phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `build' make: Entering directory '/tmp/guix-build-kraken2-2.1.1.drv-0/source/src' g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o estimate_capacity.o estimate_capacity.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o seqreader.o seqreader.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o mmscanner.o mmscanner.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o omp_hack.o omp_hack.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o utilities.o utilities.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o build_db.o build_db.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o mmap_file.o mmap_file.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o compact_hash.o compact_hash.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o taxonomy.o taxonomy.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o classify.o classify.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o reports.o reports.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o hyperloglogplus.o hyperloglogplus.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o aa_translate.o aa_translate.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o dump_table.o dump_table.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -c -o lookup_accession_numbers.o lookup_accession_numbers.cc g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o estimate_capacity estimate_capacity.o seqreader.o mmscanner.o omp_hack.o utilities.o g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o lookup_accession_numbers lookup_accession_numbers.o mmap_file.o omp_hack.o utilities.o g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o build_db build_db.o mmap_file.o compact_hash.o taxonomy.o seqreader.o mmscanner.o omp_hack.o utilities.o g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o dump_table dump_table.o mmap_file.o compact_hash.o omp_hack.o taxonomy.o reports.o hyperloglogplus.o g++ -fopenmp -Wall -std=c++11 -O3 -DLINEAR_PROBING -o classify classify.o reports.o hyperloglogplus.o mmap_file.o compact_hash.o taxonomy.o seqreader.o mmscanner.o omp_hack.o aa_translate.o utilities.o make: Leaving directory '/tmp/guix-build-kraken2-2.1.1.drv-0/source/src' phase `build' succeeded after 4.3 seconds starting phase `check' test suite not run phase `check' succeeded after 0.0 seconds starting phase `install-scripts' Backtrace: 16 (primitive-load "/gnu/store/s0lq3gl02zwpkpz8zgvs7afs599…") In ice-9/eval.scm: 191:35 15 (_ _) In guix/build/gnu-build-system.scm: 838:2 14 (gnu-build #:source _ #:outputs _ #:inputs _ #:phases . #) In ice-9/boot-9.scm: 1736:10 13 (with-exception-handler _ _ #:unwind? _ # _) In srfi/srfi-1.scm: 857:16 12 (every1 # …) In guix/build/gnu-build-system.scm: 847:30 11 (_ _) In ice-9/boot-9.scm: 142:2 10 (dynamic-wind _ _ #) In ice-9/eval.scm: 619:8 9 (_ #(#(#(# # #)) #)) In srfi/srfi-1.scm: 634:9 8 (for-each # ("dow…" …)) In ice-9/boot-9.scm: 1736:10 7 (with-exception-handler _ _ #:unwind? _ # _) In ice-9/ports.scm: 445:17 6 (call-with-input-file _ _ #:binary _ #:encoding _ # _) In guix/build/utils.scm: 741:26 5 (_ _) 767:26 4 (_ # #) In srfi/srfi-1.scm: 460:18 3 (fold # …) In unknown file: 2 (string-concatenate-reverse (" -q ${FTP_SERVER}${fi…" …) …) In ice-9/boot-9.scm: 1669:16 1 (raise-exception _ #:continuable? _) 1669:16 0 (raise-exception _ #:continuable? _) ice-9/boot-9.scm:1669:16: In procedure raise-exception: In procedure string-append: Wrong type (expecting string): #f