starting phase `set-SOURCE-DATE-EPOCH'
phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds
starting phase `set-paths'
environment variable `PATH' set to `/gnu/store/ild13b0r1cfalbd766q1633bgjgm623i-r-minimal-4.1.2/bin:/gnu/store/ikc2qn1h260f8mdhjz2cwndv2i7n753z-tar-1.34/bin:/gnu/store/v5l2251ck0r4n3w2rjw3l5dzyqsb9zj1-gzip-1.10/bin:/gnu/store/w6zv2mz56wyxr471q38a3cmzm4iqimy8-bzip2-1.0.8/bin:/gnu/store/72kpdqplq4nc87fm7ch47kxy3nlkzsyx-xz-5.2.5/bin:/gnu/store/jazwfsj2v41yih2yzw5nydqgdz1hgfm4-file-5.39/bin:/gnu/store/s49sxmz9g4xmzz222cay9k04ziy3qgmj-diffutils-3.8/bin:/gnu/store/m96snvbl92ivkd32giqh5f3d21bc2n5x-patch-2.7.6/bin:/gnu/store/l8l2y2dlya5rs9hfypmcb4saay7iwn0q-findutils-4.8.0/bin:/gnu/store/v45pjc1yqmy59j9ff913p3ywn9qk4lqx-gawk-5.1.0/bin:/gnu/store/7cddr79rydhc1m4hxr921mq17pz1jj3z-sed-4.8/bin:/gnu/store/ldkm5jwql0qsrfh3ax6rljjsrk0jzv7z-grep-3.6/bin:/gnu/store/25gv43v5rm05i26z39ajrd6nsxa5r461-coreutils-8.32/bin:/gnu/store/l8kxrs01lll3pzjrd590p45l8k045q6q-make-4.3/bin:/gnu/store/vx6vfbmmazvfi7vp8xyjn2mcyylvw9gn-bash-minimal-5.1.8/bin:/gnu/store/k452f0r5bk6n0cbsf5ndxbp5qcf6bpfw-ld-wrapper-0/bin:/gnu/store/6mqcv52gwn2dnbislgv9k99525mzmrrs-binutils-2.37/bin:/gnu/store/vakvgvrb839igv16jkif4lmx11d25jqb-gcc-10.3.0/bin:/gnu/store/2fk1gz2s7ppdicynscra9b19byrrr866-glibc-2.33/bin:/gnu/store/2fk1gz2s7ppdicynscra9b19byrrr866-glibc-2.33/sbin'
environment variable `R_LIBS_SITE' set to `/gnu/store/nyi4sg8wjp1dnkbd4rkwrniy9qsvhjmp-r-knitr-1.37/site-library/:/gnu/store/drxhpk02mipa2c32hsyabzjhvbg9dhsl-r-biocgenerics-0.40.0/site-library/:/gnu/store/g91jilkd37bw87y81cqhad8v6hyzcllr-r-s4vectors-0.32.3/site-library/:/gnu/store/br7ymkw0hzzl4wxn359lyk7vs725sa1l-r-yaml-2.2.1/site-library/:/gnu/store/id6h6vy21g352vvpjxxwb6shhv608v65-r-xfun-0.29/site-library/:/gnu/store/rzd93jwfly18gx5d2wjq1v7i73n8l3vx-r-stringr-1.4.0/site-library/:/gnu/store/fln059izvpw4dp3dsf2ayw6jlbwm597h-r-highr-0.9/site-library/:/gnu/store/f4ym055flbga1l1k7bwz0mm5iamz7qlp-r-evaluate-0.14/site-library/:/gnu/store/51z58ah8f0dhynfjz1qfq1xb6bxdl1x2-r-stringi-1.7.6/site-library/:/gnu/store/zi5v9whyxnbh31jd58v3hplhy8md5lzi-r-magrittr-2.0.1/site-library/:/gnu/store/cn8a4vnzrjflcfskasb6ma2vl2l3wlln-r-glue-1.6.0/site-library/'
environment variable `BASH_LOADABLES_PATH' unset
environment variable `C_INCLUDE_PATH' set to `/gnu/store/w6zv2mz56wyxr471q38a3cmzm4iqimy8-bzip2-1.0.8/include:/gnu/store/72kpdqplq4nc87fm7ch47kxy3nlkzsyx-xz-5.2.5/include:/gnu/store/jazwfsj2v41yih2yzw5nydqgdz1hgfm4-file-5.39/include:/gnu/store/v45pjc1yqmy59j9ff913p3ywn9qk4lqx-gawk-5.1.0/include:/gnu/store/l8kxrs01lll3pzjrd590p45l8k045q6q-make-4.3/include:/gnu/store/6mqcv52gwn2dnbislgv9k99525mzmrrs-binutils-2.37/include:/gnu/store/vakvgvrb839igv16jkif4lmx11d25jqb-gcc-10.3.0/include:/gnu/store/2fk1gz2s7ppdicynscra9b19byrrr866-glibc-2.33/include:/gnu/store/99a2njzz22dkzd8pz75fsi5nbgv9ww0x-linux-libre-headers-5.10.35/include'
environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/w6zv2mz56wyxr471q38a3cmzm4iqimy8-bzip2-1.0.8/include:/gnu/store/72kpdqplq4nc87fm7ch47kxy3nlkzsyx-xz-5.2.5/include:/gnu/store/jazwfsj2v41yih2yzw5nydqgdz1hgfm4-file-5.39/include:/gnu/store/v45pjc1yqmy59j9ff913p3ywn9qk4lqx-gawk-5.1.0/include:/gnu/store/l8kxrs01lll3pzjrd590p45l8k045q6q-make-4.3/include:/gnu/store/6mqcv52gwn2dnbislgv9k99525mzmrrs-binutils-2.37/include:/gnu/store/vakvgvrb839igv16jkif4lmx11d25jqb-gcc-10.3.0/include/c++:/gnu/store/vakvgvrb839igv16jkif4lmx11d25jqb-gcc-10.3.0/include:/gnu/store/2fk1gz2s7ppdicynscra9b19byrrr866-glibc-2.33/include:/gnu/store/99a2njzz22dkzd8pz75fsi5nbgv9ww0x-linux-libre-headers-5.10.35/include'
environment variable `LIBRARY_PATH' set to `/gnu/store/ild13b0r1cfalbd766q1633bgjgm623i-r-minimal-4.1.2/lib:/gnu/store/w6zv2mz56wyxr471q38a3cmzm4iqimy8-bzip2-1.0.8/lib:/gnu/store/72kpdqplq4nc87fm7ch47kxy3nlkzsyx-xz-5.2.5/lib:/gnu/store/jazwfsj2v41yih2yzw5nydqgdz1hgfm4-file-5.39/lib:/gnu/store/v45pjc1yqmy59j9ff913p3ywn9qk4lqx-gawk-5.1.0/lib:/gnu/store/6mqcv52gwn2dnbislgv9k99525mzmrrs-binutils-2.37/lib:/gnu/store/2fk1gz2s7ppdicynscra9b19byrrr866-glibc-2.33/lib:/gnu/store/3ywv7s8d38rgcq7ljmc1s084358a2m3h-glibc-2.33-static/lib:/gnu/store/0brdikxqk59hdr47qabcm3sya001d8vf-glibc-utf8-locales-2.33/lib'
environment variable `GUIX_LOCPATH' set to `/gnu/store/0brdikxqk59hdr47qabcm3sya001d8vf-glibc-utf8-locales-2.33/lib/locale'
phase `set-paths' succeeded after 0.0 seconds
starting phase `install-locale'
using 'en_US.utf8' locale for category "LC_ALL"
phase `install-locale' succeeded after 0.0 seconds
starting phase `unpack'
BiocIO/DESCRIPTION
BiocIO/NAMESPACE
BiocIO/R/
BiocIO/R/BiocFile.R
BiocIO/R/compression.R
BiocIO/R/export.R
BiocIO/R/import.R
BiocIO/README.md
BiocIO/build/
BiocIO/build/vignette.rds
BiocIO/inst/
BiocIO/inst/doc/
BiocIO/inst/doc/BiocIO.R
BiocIO/inst/doc/BiocIO.Rmd
BiocIO/inst/doc/BiocIO.html
BiocIO/man/
BiocIO/man/BiocFile-class.Rd
BiocIO/man/export.Rd
BiocIO/tests/
BiocIO/tests/testthat/
BiocIO/tests/testthat.R
BiocIO/tests/testthat/test_export_import_yield.R
BiocIO/tests/testthat/test_utils.R
BiocIO/vignettes/
BiocIO/vignettes/BiocIO.Rmd
phase `unpack' succeeded after 0.0 seconds
starting phase `patch-usr-bin-file'
phase `patch-usr-bin-file' succeeded after 0.0 seconds
starting phase `patch-source-shebangs'
phase `patch-source-shebangs' succeeded after 0.0 seconds
starting phase `patch-generated-file-shebangs'
phase `patch-generated-file-shebangs' succeeded after 0.0 seconds
starting phase `install'
* installing *source* package ‘BiocIO’ ...
** using staged installation
** R
** inst
** tests
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BiocIO)
phase `install' succeeded after 6.5 seconds
starting phase `check'
Testing examples for package ‘BiocIO’
Running specific tests for package ‘BiocIO’
  Running ‘testthat.R’
phase `check' succeeded after 2.5 seconds
starting phase `patch-shebangs'
phase `patch-shebangs' succeeded after 0.0 seconds
starting phase `strip'
phase `strip' succeeded after 0.0 seconds
starting phase `validate-runpath'
phase `validate-runpath' succeeded after 0.0 seconds
starting phase `validate-documentation-location'
phase `validate-documentation-location' succeeded after 0.0 seconds
starting phase `delete-info-dir-file'
phase `delete-info-dir-file' succeeded after 0.0 seconds
starting phase `patch-dot-desktop-files'
phase `patch-dot-desktop-files' succeeded after 0.0 seconds
starting phase `make-dynamic-linker-cache'
phase `make-dynamic-linker-cache' succeeded after 0.0 seconds
starting phase `install-license-files'
installing 0 license files from '.'
phase `install-license-files' succeeded after 0.0 seconds
starting phase `reset-gzip-timestamps'
phase `reset-gzip-timestamps' succeeded after 0.0 seconds
starting phase `compress-documentation'
phase `compress-documentation' succeeded after 0.0 seconds