WARNING: (guile-user): imported module (guix build utils) overrides core binding `delete' starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/l1xmcy7vkq9bzvcx57zc9lyqyhy4qn7b-icedtea-3.19.0-jdk/bin:/gnu/store/dw5xn0v0ngz49gwlnrxrai9qdd80h021-ant-1.9.15/bin:/gnu/store/gfd1415b6lbhkp4kcqjapram7b4j7mbp-zip-3.0/bin:/gnu/store/hqysqhh80g7qy8287b8p2gwz0379vh50-tar-1.34/bin:/gnu/store/8rvnivj15gmirawhikgbjaang5b4w779-gzip-1.10/bin:/gnu/store/64zk0izmaframq6cd0xlsmk0rxn3zc52-bzip2-1.0.8/bin:/gnu/store/z6bw81zw5b5jm3p02y906p0wnjbjqa7n-xz-5.2.5/bin:/gnu/store/jfmrxybjkd0nvh1n34hbzv0lwsnmxz1v-file-5.39/bin:/gnu/store/49j4cjqc8sckyh4qhf9j9dmc6anc8wk9-diffutils-3.8/bin:/gnu/store/znjj5y98lvi46fll85qg22ngz966gx1d-patch-2.7.6/bin:/gnu/store/yq3xalg1p2p5p5hfpw4v5jx0v86qw45w-findutils-4.8.0/bin:/gnu/store/bgyr8c7bl1sqhpapm2kghiya0k6zvi51-gawk-5.1.0/bin:/gnu/store/dsldg7i4y6hxdknh7cv93rbxbp17xm93-sed-4.8/bin:/gnu/store/4znchc8whjbs50mvxgc0skmkvyhy9xk1-grep-3.6/bin:/gnu/store/wllq3y3sl5bldm9vsx2fcwhcmks4i9ar-coreutils-8.32/bin:/gnu/store/zyhbjfyqh10yiw1dw1x1i7n70jm9ygdn-make-4.3/bin:/gnu/store/2an4h5ndc22dv62q3l985ciq862q4bj7-bash-minimal-5.1.8/bin:/gnu/store/g58zxpycy64m790vwjlzpadmbn065fia-ld-wrapper-0/bin:/gnu/store/cr38d3gvf52ckns2b01lwgw86hk3mvcc-binutils-2.37/bin:/gnu/store/h88kd46c8br0wc4i6hq19cjby081ina4-gcc-10.3.0/bin:/gnu/store/mjdjgiz9k5rrbj440r16z6p5g33nr7d7-glibc-2.33/bin:/gnu/store/mjdjgiz9k5rrbj440r16z6p5g33nr7d7-glibc-2.33/sbin' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/l1xmcy7vkq9bzvcx57zc9lyqyhy4qn7b-icedtea-3.19.0-jdk/include:/gnu/store/64zk0izmaframq6cd0xlsmk0rxn3zc52-bzip2-1.0.8/include:/gnu/store/z6bw81zw5b5jm3p02y906p0wnjbjqa7n-xz-5.2.5/include:/gnu/store/jfmrxybjkd0nvh1n34hbzv0lwsnmxz1v-file-5.39/include:/gnu/store/bgyr8c7bl1sqhpapm2kghiya0k6zvi51-gawk-5.1.0/include:/gnu/store/zyhbjfyqh10yiw1dw1x1i7n70jm9ygdn-make-4.3/include:/gnu/store/cr38d3gvf52ckns2b01lwgw86hk3mvcc-binutils-2.37/include:/gnu/store/h88kd46c8br0wc4i6hq19cjby081ina4-gcc-10.3.0/include:/gnu/store/mjdjgiz9k5rrbj440r16z6p5g33nr7d7-glibc-2.33/include:/gnu/store/k8xlwnnmhgmvzyxxfjq3z3fci73zx7x9-linux-libre-headers-5.10.35/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/l1xmcy7vkq9bzvcx57zc9lyqyhy4qn7b-icedtea-3.19.0-jdk/include:/gnu/store/64zk0izmaframq6cd0xlsmk0rxn3zc52-bzip2-1.0.8/include:/gnu/store/z6bw81zw5b5jm3p02y906p0wnjbjqa7n-xz-5.2.5/include:/gnu/store/jfmrxybjkd0nvh1n34hbzv0lwsnmxz1v-file-5.39/include:/gnu/store/bgyr8c7bl1sqhpapm2kghiya0k6zvi51-gawk-5.1.0/include:/gnu/store/zyhbjfyqh10yiw1dw1x1i7n70jm9ygdn-make-4.3/include:/gnu/store/cr38d3gvf52ckns2b01lwgw86hk3mvcc-binutils-2.37/include:/gnu/store/h88kd46c8br0wc4i6hq19cjby081ina4-gcc-10.3.0/include/c++:/gnu/store/h88kd46c8br0wc4i6hq19cjby081ina4-gcc-10.3.0/include:/gnu/store/mjdjgiz9k5rrbj440r16z6p5g33nr7d7-glibc-2.33/include:/gnu/store/k8xlwnnmhgmvzyxxfjq3z3fci73zx7x9-linux-libre-headers-5.10.35/include' environment variable `LIBRARY_PATH' set to `/gnu/store/l1xmcy7vkq9bzvcx57zc9lyqyhy4qn7b-icedtea-3.19.0-jdk/lib:/gnu/store/dw5xn0v0ngz49gwlnrxrai9qdd80h021-ant-1.9.15/lib:/gnu/store/cp0d22xdgvckw3g299syz695zwwx2lls-java-guava-20.0/lib:/gnu/store/64zk0izmaframq6cd0xlsmk0rxn3zc52-bzip2-1.0.8/lib:/gnu/store/z6bw81zw5b5jm3p02y906p0wnjbjqa7n-xz-5.2.5/lib:/gnu/store/jfmrxybjkd0nvh1n34hbzv0lwsnmxz1v-file-5.39/lib:/gnu/store/bgyr8c7bl1sqhpapm2kghiya0k6zvi51-gawk-5.1.0/lib:/gnu/store/cr38d3gvf52ckns2b01lwgw86hk3mvcc-binutils-2.37/lib:/gnu/store/mjdjgiz9k5rrbj440r16z6p5g33nr7d7-glibc-2.33/lib:/gnu/store/88bdm10sayqjnggrxlbdmk3rv1qqdrvl-glibc-2.33-static/lib:/gnu/store/y4x3whxg8i1p9w9vy67lz3cw8xfil8bh-glibc-utf8-locales-2.33/lib:/gnu/store/w24v4y8mvmfpwxb4xz1dfi019spdxffh-java-guice-4.1/lib:/gnu/store/3fhksgkxp2fa0qzxvv3awym7sf027fm1-java-bsh-2.0b6/lib:/gnu/store/37fdjiqkb3i2652v1ndd0yj1hbggwp9k-java-jsr305-3.0.1/lib:/gnu/store/d06vlspmlg9qiykcqv167p16apn8z0cf-java-junit-4.12/lib:/gnu/store/n80w8vvbyc11s4h59kj6xwyxvnmxfnya-java-guava-parent-pom-20.0/lib:/gnu/store/r7wb5z245pgb33nxbycl5bshrp67aq1b-java-guice-parent-pom-4.1/lib:/gnu/store/akldsl7h32gqwngf47x193z7f0q0r92p-java-javax-inject-1/lib:/gnu/store/ddvzdkf6k1mc3lhyi706pffic5l51s94-java-asm-6.0/lib:/gnu/store/76qh6ij10cmxcrawskr3dbjiynh22mz9-java-aopalliance-1.0/lib:/gnu/store/6bri3m4dfvfa4rp001v7dx23b7h017c9-java-hamcrest-core-1.3/lib:/gnu/store/9rn52sffypkjqhhmbw6yqnqd0vi48yfj-java-sonatype-oss-parent-pom-7/lib:/gnu/store/6n78dy5k4n6rf9bj3w8w3hcrx8shi0zz-java-google-parent-pom-5/lib:/gnu/store/z6drb4qrbn2xw44nw3lw6ga3arr6w98w-java-org-ow2-parent-pom-1.3/lib:/gnu/store/pgcbf2m3nzqr8rbi28ykic4lxxpq2bb1-java-hamcrest-parent-pom-1.3/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/y4x3whxg8i1p9w9vy67lz3cw8xfil8bh-glibc-utf8-locales-2.33/lib/locale' phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.travis.yml' -> `./.travis.yml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/build.xml' -> `./build.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.dockerignore' -> `./.dockerignore' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/README.md' -> `./README.md' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.classpath' -> `./.classpath' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/build.gradle' -> `./build.gradle' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.project' -> `./.project' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/gradlew' -> `./gradlew' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/Dockerfile' -> `./Dockerfile' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/LICENSE.txt' -> `./LICENSE.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.gitignore' -> `./.gitignore' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/settings.gradle' -> `./settings.gradle' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/mark_illumina_adapters_test.sam' -> `./testdata/picard/illumina/mark_illumina_adapters_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/Homo_sapiens_assembly18.seqdict.sam' -> `./testdata/picard/illumina/Homo_sapiens_assembly18.seqdict.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaLaneMetrics/.gitignore' -> `./testdata/picard/illumina/CollectIlluminaLaneMetrics/.gitignore' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/library.params' -> `./testdata/picard/illumina/25T8B8B25T/library.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/s_1_1101_barcode.txt' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/s_1_1101_barcode.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C59.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C59.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C60.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C60.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C64.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C64.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C61.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C61.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C62.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C62.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C65.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C65.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C63.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C63.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C66.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C66.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/Data/Intensities/L001/s_1_1101.locs' -> `./testdata/picard/illumina/25T8B8B25T/Data/Intensities/L001/s_1_1101.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCACCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTCGGTTTTTTGCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/NN.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/NN.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTCTCTCGCTTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TACTTAGCGTCTGCAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGGTATCACTTCAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTAATCACCTCTAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTTCCGAAACCTCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACAGTTGAATCTTCTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/barcode_double.params' -> `./testdata/picard/illumina/25T8B8B25T/fastq/barcode_double.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACATATTCAAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAATAGTCCGACTCTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCAAGGGCGATATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTCTTTCTTCTGCTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCTTTTATCATTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCACCT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTATAACAAATTCAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GACCAGGACCATCACA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTATATCTTCATGTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTATAGCATTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/NN.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/NN.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTTATCTTAGCCAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTGCGAGACATTAA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTATCAACACCATAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CGCTATGTTTCTCCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTACCAGGTTCTTGGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/NN.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/NN.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGTATCTCTTACTCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTGTAATCCTATTAGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATGCCAATTGGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCGCCTTGCCAACGCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGCTTTTAGCATTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATTGTCTGGATTCACA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTAAGTACTGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCCCAGTGCTTTTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCAAGTACGAACTTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCTATCCACCTCCCCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGTTGCTTTGACTTGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ATAGCGTCTTGGTCTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTGAATAGATATCCGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCTACTGCTTCCCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGTCACTTCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGATGGTACCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCTTGGTGCTGCACT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTATTCTTCGTTTTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCAGAGCTCAACTGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TCCCCGTTCCAACTTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTAATCAGCTGGTATT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCTCATCTTCCTTCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GTCTGATGGAACTTCG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CTCCCTCTTCCTTCTT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACCAACTGCATCACTT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CAGCGGTATGTACTGC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCTAGCCCTTGAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCTTCGCAGAATCGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CCCGATTTTCTCTCCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TGCTCGACTTCACAGT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AAGACACTAGTCTCCT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/TTCCTCCTCACCATCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/NN.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/NN.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AACTTGACGCTCTCTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/CATGTTCGCGCCTTTT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/GCCGTCGAAGGTACCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.1.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/AGGTCGCATTCCTTTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.barcode_2.fastq' -> `./testdata/picard/illumina/25T8B8B25T/fastq/ACTAAGACGTCCTCAT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCAGAGCT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCAGAGCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCTCTTTC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCTCTTTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TGTTCCGA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TGTTCCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CTACCAGG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CTACCAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/GACCAGGA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/GACCAGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/AGTTGCTT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/AGTTGCTT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CTGTAATC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CTGTAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ATTATCAA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ATTATCAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CGCTATGT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CGCTATGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ATAGCGTC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ATAGCGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCTTCTTT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCTTCTTT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TGTATCTC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TGTATCTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/N.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/N.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/AAGACACT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/AAGACACT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TCGCCTTG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TCGCCTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/GTCTGATG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/GTCTGATG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TTCCTCCT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TTCCTCCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ACAGTTGA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ACAGTTGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TGTAATCA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TGTAATCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCTATTCT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCTATTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCCGATTT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCCGATTT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TTCTCATC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TTCTCATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TTATATCT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TTATATCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ATTGTCTG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ATTGTCTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TGTCGGTT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TGTCGGTT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/AGGTTATC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/AGGTTATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ACCAACTG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ACCAACTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ACAGGTAT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ACAGGTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CAATAGTC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CAATAGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TTCCCCAG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TTCCCCAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/AGGTGCGA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/AGGTGCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TACTTAGC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TACTTAGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CATGCTTT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CATGCTTT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/GCTATCCA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/GCTATCCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TCCTTGGT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TCCTTGGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/barcode_double.params' -> `./testdata/picard/illumina/25T8B8B25T/sams/barcode_double.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TGCAAGTA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TGCAAGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/GTATAACA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/GTATAACA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/AACTTGAC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/AACTTGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/AGGTCGCA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/AGGTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TTAATCAG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TTAATCAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCTTCGCA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCTTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CTCCCTCT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CTCCCTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/N_with_molecular_index.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/N_with_molecular_index.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CATGTTCG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CATGTTCG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ACCTACTG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ACCTACTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CATGCTTA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CATGCTTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CAGCAAGG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CAGCAAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TTGAATAG.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TTGAATAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TGCTCGAC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TGCTCGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCTCTTCT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCTCTTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/TCCCCGTT.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/TCCCCGTT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/CCTATGCC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/CCTATGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/ACTAAGAC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/ACTAAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/GCCTAGCC.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/GCCTAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B8B25T/sams/GCCGTCGA.sam' -> `./testdata/picard/illumina/25T8B8B25T/sams/GCCGTCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C145.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C145.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C159.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C159.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C241.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C241.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C109.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C109.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C239.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C239.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C222.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C222.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C171.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C171.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C117.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C117.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C120.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C120.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C128.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C128.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C218.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C218.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C160.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C160.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C112.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C112.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C126.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C126.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C111.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C111.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C223.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C223.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C137.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C137.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C236.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C236.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C110.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C110.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C59.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C59.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C97.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C97.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C123.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C123.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C119.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C119.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C60.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C60.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C183.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C183.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C95.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C95.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C140.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C140.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C78.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C78.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C169.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C169.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C188.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C188.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C88.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C88.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C205.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C205.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C91.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C91.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C146.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C146.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C249.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C249.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C217.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C217.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C118.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C118.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C72.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C72.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C213.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C213.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C219.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C219.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C152.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C152.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C84.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C84.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C139.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C139.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C246.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C246.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C133.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C133.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C100.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C100.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C204.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C204.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C76.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C76.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C125.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C125.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C178.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C178.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C164.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C164.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C85.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C85.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C212.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C212.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C244.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C244.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C234.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C234.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C96.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C96.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C220.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C220.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C214.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C214.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C193.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C193.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C199.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C199.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C82.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C82.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C147.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C147.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C170.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C170.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C98.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C98.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C232.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C232.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C74.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C74.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C184.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C184.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C176.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C176.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C227.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C227.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C86.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C86.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C105.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C105.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C174.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C174.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C103.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C103.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C75.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C75.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C172.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C172.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C149.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C149.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C102.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C102.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C196.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C196.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C200.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C200.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C250.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C250.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C108.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C108.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C180.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C180.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C209.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C209.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C87.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C87.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C156.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C156.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C157.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C157.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C70.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C70.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C68.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C68.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C185.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C185.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C80.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C80.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C216.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C216.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C162.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C162.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C116.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C116.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C127.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C127.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C206.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C206.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C104.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C104.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C138.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C138.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C121.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C121.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C215.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C215.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C93.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C93.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C203.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C203.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C64.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C64.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C245.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C245.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C202.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C202.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C148.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C148.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C122.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C122.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C61.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C61.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C124.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C124.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C179.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C179.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C187.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C187.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C114.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C114.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C238.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C238.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C99.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C99.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C231.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C231.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C194.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C194.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C71.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C71.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C177.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C177.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C151.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C151.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C79.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C79.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C210.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C210.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C83.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C83.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C163.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C163.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C229.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C229.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C106.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C106.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C132.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C132.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C243.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C243.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C90.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C90.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C197.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C197.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C167.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C167.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C101.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C101.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C240.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C240.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C248.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C248.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C89.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C89.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C62.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C62.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C192.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C192.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C237.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C237.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C230.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C230.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C131.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C131.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C207.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C207.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C154.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C154.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C224.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C224.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C113.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C113.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C67.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C67.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C65.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C65.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C211.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C211.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C186.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C186.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C136.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C136.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C173.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C173.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C175.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C175.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C189.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C189.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C168.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C168.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C142.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C142.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C143.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C143.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C107.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C107.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C158.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C158.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C134.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C134.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C141.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C141.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C63.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C63.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C165.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C165.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C66.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C66.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C92.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C92.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C181.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C181.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C153.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C153.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C77.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C77.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C94.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C94.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C191.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C191.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C130.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C130.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C242.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C242.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C69.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C69.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C161.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C161.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C135.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C135.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C221.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C221.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C150.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C150.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C144.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C144.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C195.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C195.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C228.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C228.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C226.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C226.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C208.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C208.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C73.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C73.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C201.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C201.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C190.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C190.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C81.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C81.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C198.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C198.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C235.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C235.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C233.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C233.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C247.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C247.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C166.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C166.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C155.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C155.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C129.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C129.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C225.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C225.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C115.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C115.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C182.1/s_1_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L001/C182.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/s_2_1101.filter' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/s_2_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C145.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C145.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C159.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C159.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C241.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C241.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C11.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C11.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C109.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C109.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C239.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C239.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C222.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C222.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C171.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C171.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C117.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C117.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C120.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C120.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C128.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C128.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C218.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C218.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C160.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C160.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C112.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C112.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C126.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C126.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C9.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C9.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C111.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C111.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C16.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C16.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C223.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C223.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C137.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C137.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C236.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C236.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C110.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C110.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C59.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C59.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C25.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C25.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C97.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C97.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C123.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C123.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C119.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C119.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C60.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C60.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C183.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C183.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C95.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C95.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C140.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C140.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C78.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C78.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C169.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C169.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C188.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C188.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C2.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C2.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C88.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C88.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C205.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C205.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C91.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C91.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C146.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C146.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C249.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C249.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C217.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C217.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C41.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C41.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C118.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C118.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C57.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C57.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C72.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C72.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C32.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C32.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C213.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C213.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C33.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C33.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C219.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C219.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C56.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C56.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C152.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C152.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C84.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C84.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C139.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C139.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C50.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C50.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C3.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C3.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C246.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C246.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C133.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C133.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C14.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C14.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C100.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C100.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C204.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C204.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C76.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C76.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C125.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C125.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C178.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C178.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C164.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C164.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C19.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C19.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C45.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C45.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C85.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C85.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C212.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C212.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C244.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C244.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C234.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C234.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C30.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C30.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C96.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C96.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C220.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C220.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C36.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C36.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C214.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C214.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C26.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C26.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C48.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C48.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C193.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C193.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C199.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C199.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C53.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C53.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C82.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C82.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C147.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C147.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C170.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C170.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C12.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C12.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C98.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C98.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C232.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C232.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C74.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C74.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C184.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C184.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C176.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C176.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C227.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C227.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C86.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C86.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C105.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C105.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C174.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C174.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C103.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C103.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C43.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C43.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C75.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C75.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C172.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C172.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C149.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C149.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C102.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C102.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C196.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C196.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C34.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C34.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C46.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C46.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C200.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C200.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C20.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C20.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C250.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C250.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C108.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C108.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C180.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C180.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C209.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C209.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C87.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C87.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C44.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C44.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C28.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C28.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C156.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C156.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C157.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C157.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C70.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C70.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C68.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C68.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C185.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C185.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C10.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C10.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C80.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C80.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C27.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C27.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C29.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C29.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C216.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C216.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C37.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C37.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C162.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C162.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C116.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C116.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C127.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C127.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C206.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C206.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C104.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C104.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C138.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C138.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C121.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C121.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C215.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C215.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C93.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C93.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C203.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C203.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C64.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C64.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C245.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C245.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C202.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C202.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C148.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C148.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C122.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C122.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C61.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C61.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C124.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C124.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C179.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C179.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C187.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C187.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C114.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C114.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C238.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C238.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C99.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C99.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C231.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C231.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C194.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C194.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C71.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C71.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C177.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C177.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C151.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C151.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C79.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C79.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C210.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C210.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C83.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C83.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C7.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C7.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C163.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C163.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C229.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C229.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C18.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C18.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C106.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C106.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C132.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C132.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C38.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C38.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C243.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C243.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C90.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C90.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C197.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C197.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C13.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C13.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C42.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C42.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C167.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C167.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C101.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C101.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C240.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C240.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C248.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C248.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C89.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C89.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C8.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C8.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C62.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C62.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C192.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C192.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C22.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C22.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C237.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C237.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C55.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C55.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C230.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C230.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C131.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C131.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C207.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C207.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C154.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C154.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C224.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C224.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C113.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C113.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C67.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C67.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C49.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C49.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C65.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C65.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C211.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C211.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C186.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C186.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C136.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C136.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C15.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C15.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C40.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C40.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C173.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C173.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C175.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C175.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C189.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C189.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C5.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C5.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C168.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C168.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C23.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C23.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C142.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C142.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C143.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C143.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C107.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C107.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C58.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C58.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C6.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C6.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C158.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C158.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C134.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C134.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C31.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C31.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C1.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C1.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C141.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C141.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C63.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C63.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C165.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C165.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C66.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C66.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C92.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C92.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C181.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C181.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C153.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C153.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C77.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C77.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C94.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C94.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C191.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C191.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C35.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C35.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C52.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C52.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C130.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C130.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C242.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C242.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C54.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C54.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C69.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C69.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C161.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C161.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C135.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C135.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C221.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C221.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C150.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C150.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C17.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C17.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C39.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C39.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C144.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C144.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C4.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C4.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C195.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C195.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C228.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C228.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C226.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C226.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C51.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C51.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C208.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C208.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C73.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C73.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C201.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C201.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C190.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C190.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C81.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C81.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C198.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C198.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C21.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C21.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C235.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C235.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C233.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C233.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C247.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C247.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C166.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C166.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C155.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C155.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C129.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C129.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C225.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C225.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C115.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C115.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C24.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C24.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C47.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C47.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C182.1/s_2_1101.bcl' -> `./testdata/picard/illumina/125T125T/Data/Intensities/BaseCalls/L002/C182.1/s_2_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/L001/s_1_1101.clocs' -> `./testdata/picard/illumina/125T125T/Data/Intensities/L001/s_1_1101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/125T125T/Data/Intensities/L002/s_2_1101.clocs' -> `./testdata/picard/illumina/125T125T/Data/Intensities/L002/s_2_1101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/filterParser/L001/s_1_0002.filter' -> `./testdata/picard/illumina/parserTests/filterParser/L001/s_1_0002.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/filterParser/L001/s_1_0003.filter' -> `./testdata/picard/illumina/parserTests/filterParser/L001/s_1_0003.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/filterParser/L001/s_1_0004.filter' -> `./testdata/picard/illumina/parserTests/filterParser/L001/s_1_0004.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/filterParser/L001/s_1_0001.filter' -> `./testdata/picard/illumina/parserTests/filterParser/L001/s_1_0001.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/posParser/s_1_1_pos.txt' -> `./testdata/picard/illumina/parserTests/posParser/s_1_1_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/posParser/s_1_2_pos.txt' -> `./testdata/picard/illumina/parserTests/posParser/s_1_2_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/posParser/s_9_3202_pos.txt' -> `./testdata/picard/illumina/parserTests/posParser/s_9_3202_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/posParser/s_1_3_pos.txt' -> `./testdata/picard/illumina/parserTests/posParser/s_1_3_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/parserTests/posParser/s_9_3201_pos.txt' -> `./testdata/picard/illumina/parserTests/posParser/s_9_3201_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX.expected.lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX.expected.lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130401_SL-HAC_0022_BH07PBADXX.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130401_SL-HAC_0022_BH07PBADXX.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130321_SL-MAK_0035_FC000000000-A306B.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130321_SL-MAK_0035_FC000000000-A306B.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130318_SL-HBB_0226_BFCC1WYMACXX/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/missing_phasing.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/missing_phasing.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/missing_phasing.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/missing_phasing.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/missing_phasing/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130401_SL-HAC_0022_BH07PBADXX/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130401_SL-HAC_0022_BH07PBADXX/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130401_SL-HAC_0022_BH07PBADXX/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130401_SL-HAC_0022_BH07PBADXX/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/NovaSeq.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/NovaSeq.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/NovaSeq.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/NovaSeq.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/IndexMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/IndexMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C302.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C302.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C145.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C145.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C159.1/FWHMGridMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C159.1/FWHMGridMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C241.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C241.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C11.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C11.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C296.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C296.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C255.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C255.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C109.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C109.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C239.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C239.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C222.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C222.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C171.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C171.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C117.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C117.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C306.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C306.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C314.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C314.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C120.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C120.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C128.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C128.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C218.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C218.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C160.1/FWHMGridMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C160.1/FWHMGridMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C160.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C160.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C112.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C112.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C126.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C126.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C9.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C9.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C111.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C111.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C16.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C16.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C262.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C262.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C223.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C223.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C137.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C137.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C236.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C236.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C110.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C110.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C304.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C304.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C269.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C269.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C59.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C59.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C25.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C25.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C25.1/PFGridMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C25.1/PFGridMetricsOut.bin' 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`/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C260.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C260.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C201.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C201.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C190.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C190.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C81.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C81.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C198.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C198.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C21.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C21.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C235.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C235.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C233.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C233.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C316.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C316.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C247.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C247.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C252.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C252.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C166.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C166.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C155.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C155.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C129.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C129.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C272.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C272.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C225.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C225.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C115.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C115.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C24.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C24.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C47.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C47.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C182.1/EmpiricalPhasingMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/NovaSeq/InterOp/C182.1/EmpiricalPhasingMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/C2MFAACXX.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/C2MFAACXX.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/C2MFAACXX.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/C2MFAACXX.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/README' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/README' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/C2MFAACXX/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/A7LE0.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/A7LE0.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/README' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/README' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/A7LE0.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/A7LE0.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A7LE0/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/A67HY.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/A67HY.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/README' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/README' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/A67HY.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/A67HY.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/A67HY/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/H7H7RADXX.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/H7H7RADXX.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/H7H7RADXX.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/H7H7RADXX.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/README' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/README' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7H7RADXX/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/H7BATADXX.illumina_phasing_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/H7BATADXX.illumina_phasing_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/H7BATADXX.illumina_lane_metrics' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/H7BATADXX.illumina_lane_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/README' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/README' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/tileRuns/H7BATADXX/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130321_SL-MAK_0035_FC000000000-A306B/RunInfo.xml' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130321_SL-MAK_0035_FC000000000-A306B/RunInfo.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130321_SL-MAK_0035_FC000000000-A306B/InterOp/TileMetricsOut.bin' -> `./testdata/picard/illumina/IlluminaLaneMetricsCollectorTest/130321_SL-MAK_0035_FC000000000-A306B/InterOp/TileMetricsOut.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/bcl_tooLong.bcl' -> `./testdata/picard/illumina/readerTests/bcl_tooLong.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/bcl_failing2.bcl' -> `./testdata/picard/illumina/readerTests/bcl_failing2.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_3_2105.clocs' -> `./testdata/picard/illumina/readerTests/s_3_2105.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/tile_1102.filter' -> `./testdata/picard/illumina/readerTests/tile_1102.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_10.locs' -> `./testdata/picard/illumina/readerTests/s_1_10.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_2106.clocs' -> `./testdata/picard/illumina/readerTests/s_1_2106.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_1101_pos.txt' -> `./testdata/picard/illumina/readerTests/s_1_1101_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/binary_passing.bin' -> `./testdata/picard/illumina/readerTests/binary_passing.bin' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/tile_1101.filter' -> `./testdata/picard/illumina/readerTests/tile_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_tooLarge.filter' -> `./testdata/picard/illumina/readerTests/pf_tooLarge.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_tooShort.filter' -> `./testdata/picard/illumina/readerTests/pf_tooShort.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_badOpeningBytes.filter' -> `./testdata/picard/illumina/readerTests/pf_badOpeningBytes.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_badVersionBytes.filter' -> `./testdata/picard/illumina/readerTests/pf_badVersionBytes.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_9.locs' -> `./testdata/picard/illumina/readerTests/s_1_9.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_8.locs' -> `./testdata/picard/illumina/readerTests/s_1_8.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_1102_pos.txt' -> `./testdata/picard/illumina/readerTests/s_1_1102_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_1104_pos.txt' -> `./testdata/picard/illumina/readerTests/s_1_1104_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/bcl_passing.bcl' -> `./testdata/picard/illumina/readerTests/bcl_passing.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_3_2103.clocs' -> `./testdata/picard/illumina/readerTests/s_3_2103.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_6.locs' -> `./testdata/picard/illumina/readerTests/s_1_6.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_failing1.filter' -> `./testdata/picard/illumina/readerTests/pf_failing1.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/bcl_tooShort.bcl' -> `./testdata/picard/illumina/readerTests/bcl_tooShort.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_passing.filter' -> `./testdata/picard/illumina/readerTests/pf_passing.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pos_failing1_pos.txt' -> `./testdata/picard/illumina/readerTests/pos_failing1_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/bcl_failing.bcl' -> `./testdata/picard/illumina/readerTests/bcl_failing.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/pf_failing2.filter' -> `./testdata/picard/illumina/readerTests/pf_failing2.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_3_2102.clocs' -> `./testdata/picard/illumina/readerTests/s_3_2102.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_7.locs' -> `./testdata/picard/illumina/readerTests/s_1_7.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_3_2104.clocs' -> `./testdata/picard/illumina/readerTests/s_3_2104.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_1_1103_pos.txt' -> `./testdata/picard/illumina/readerTests/s_1_1103_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_2_1101.clocs' -> `./testdata/picard/illumina/readerTests/s_2_1101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/s_2_1101_pos.txt' -> `./testdata/picard/illumina/readerTests/s_2_1101_pos.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/cbcls/tile_1101.filter' -> `./testdata/picard/illumina/readerTests/cbcls/tile_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/cbcls/C2.1/L001_1.cbcl' -> `./testdata/picard/illumina/readerTests/cbcls/C2.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/cbcls/C3.1/L001_1.cbcl' -> `./testdata/picard/illumina/readerTests/cbcls/C3.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/readerTests/cbcls/C1.1/L001_1.cbcl' -> `./testdata/picard/illumina/readerTests/cbcls/C1.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C145.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C145.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C159.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C159.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C241.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C241.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C109.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C109.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C239.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C239.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C222.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C222.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C171.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C171.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C117.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C117.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C120.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C120.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C128.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C128.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C218.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C218.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C160.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C160.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C112.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C112.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C126.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C126.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C111.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C111.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C223.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C223.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C137.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C137.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C236.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C236.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C110.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C110.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C59.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C59.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C97.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C97.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C123.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C123.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C119.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C119.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C60.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C60.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C183.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C183.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C95.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C95.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C140.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C140.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C78.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C78.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C169.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C169.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C188.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C188.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C88.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C88.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C205.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C205.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C91.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C91.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C146.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C146.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C249.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C249.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C217.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C217.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C118.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C118.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C72.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C72.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C213.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C213.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C219.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C219.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C152.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C152.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C84.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C84.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C139.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C139.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C246.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C246.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C133.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C133.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C100.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C100.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C204.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C204.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C76.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C76.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C125.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C125.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C178.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C178.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C164.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C164.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C85.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C85.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C212.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C212.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C244.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C244.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C234.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C234.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C96.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C96.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C220.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C220.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C214.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C214.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C193.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C193.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C199.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C199.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C82.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C82.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C147.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C147.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C170.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C170.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C98.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C98.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C232.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C232.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C74.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C74.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C184.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C184.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C176.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C176.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C227.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C227.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C86.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C86.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C105.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C105.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C174.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C174.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C103.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C103.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C75.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C75.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C172.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C172.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C149.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C149.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C102.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C102.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C196.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C196.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C200.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C200.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C250.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C250.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C108.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C108.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C180.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C180.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C209.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C209.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C87.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C87.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C156.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C156.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C157.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C157.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C70.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C70.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C68.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C68.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C185.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C185.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C80.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C80.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C216.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C216.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C162.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C162.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C116.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C116.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C127.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C127.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C206.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C206.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C104.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C104.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C138.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C138.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C121.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C121.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C215.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C215.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C93.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C93.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C203.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C203.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C64.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C64.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C245.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C245.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C202.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C202.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C148.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C148.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C122.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C122.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C61.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C61.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C124.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C124.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C179.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C179.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C187.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C187.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C114.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C114.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C238.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C238.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C99.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C99.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C231.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C231.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C194.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C194.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C71.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C71.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C177.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C177.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C151.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C151.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C79.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C79.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C210.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C210.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C83.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C83.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C163.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C163.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C229.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C229.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C106.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C106.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C132.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C132.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C243.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C243.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C90.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C90.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C197.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C197.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C167.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C167.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C101.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C101.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C240.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C240.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C248.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C248.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C89.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C89.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C62.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C62.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C192.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C192.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C237.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C237.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C230.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C230.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C131.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C131.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C207.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C207.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C154.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C154.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C224.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C224.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C113.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C113.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C67.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C67.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C65.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C65.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C211.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C211.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C186.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C186.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C136.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C136.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C173.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C173.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C175.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C175.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C189.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C189.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C168.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C168.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C142.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C142.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C143.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C143.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C107.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C107.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C158.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C158.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C134.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C134.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C141.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C141.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C63.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C63.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C165.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C165.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C66.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C66.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C92.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C92.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C181.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C181.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C153.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C153.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C77.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C77.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C94.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C94.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C191.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C191.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C130.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C130.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C242.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C242.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C69.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C69.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C161.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C161.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C135.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C135.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C221.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C221.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C150.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C150.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C144.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C144.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C195.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C195.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C228.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C228.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C226.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C226.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C208.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C208.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C73.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C73.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C201.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C201.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C190.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C190.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C81.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C81.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C198.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C198.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C235.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C235.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C233.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C233.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C247.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C247.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C166.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C166.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C155.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C155.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C129.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C129.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C225.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C225.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C115.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C115.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C182.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/BaseCalls/L001/C182.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/L001/s_1_1101.clocs' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/125T125T/Data/Intensities/L001/s_1_1101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/barcodeData.1' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/barcodeData.1' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/s_1_1101_barcode.txt.gz' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/s_1_1101_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/L001/s_1_1101.clocs' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/Data/Intensities/L001/s_1_1101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/barcodes_dir/s_1_1101_barcode.txt.gz' -> `./testdata/picard/illumina/CollectIlluminaBasecallingMetrics/25T8B25T/barcodes_dir/s_1_1101_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/s.locs' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/s.locs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/s_1_1102_barcode.txt.gz' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/s_1_1102_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/s_1_1101_barcode.txt.gz' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/s_1_1101_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/s_1_1102.filter' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/s_1_1102.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/s_1_1101.filter' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/s_1_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C302.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C302.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C302.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C302.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C145.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C145.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C145.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C145.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C159.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C159.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C159.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C159.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C241.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C241.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C241.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C241.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C11.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C11.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C11.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C11.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C296.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C296.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C296.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C296.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C255.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C255.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C255.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C255.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C109.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C109.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C109.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C109.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C239.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C239.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C239.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C239.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C222.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C222.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C222.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C222.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C171.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C171.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C171.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C171.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C117.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C117.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C117.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C117.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C306.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C306.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C306.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C306.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C314.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C314.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C314.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C314.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C120.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C120.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C120.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C120.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C128.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C128.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C128.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C128.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C218.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C218.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C218.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C218.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C160.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C160.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C160.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C160.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C112.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C112.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C112.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C112.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C126.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C126.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C126.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C126.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C9.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C9.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C9.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C9.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C111.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C111.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C111.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C111.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C16.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C16.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C16.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C16.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C262.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C262.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C262.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C262.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C223.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C223.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C223.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C223.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C137.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C137.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C137.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C137.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C236.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C236.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C236.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C236.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C110.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C110.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C110.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C110.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C304.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C304.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C304.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C304.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C269.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C269.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C269.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C269.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C59.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C59.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C59.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C59.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C25.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C25.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C25.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C25.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C97.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C97.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C97.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C97.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C123.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C123.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C123.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C123.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C119.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C119.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C119.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C119.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C258.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C258.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C258.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C258.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C281.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C281.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C281.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C281.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C60.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C60.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C60.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C60.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C183.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C183.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C183.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C183.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C95.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C95.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C95.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C95.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C140.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C140.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C140.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C140.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C78.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C78.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C78.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C78.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C169.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C169.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C169.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C169.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C188.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C188.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C188.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C188.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C2.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C2.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C2.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C2.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C88.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C88.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C88.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C88.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C205.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C205.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C205.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C205.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C271.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C271.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C271.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C271.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C91.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C91.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C91.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C91.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C265.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C265.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C265.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C265.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C277.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C277.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C277.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C277.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C251.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C251.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C251.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C251.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C146.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C146.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C146.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C146.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C303.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C303.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C303.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C303.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C249.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C249.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C249.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C249.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C217.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C217.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C217.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C217.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C41.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C41.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C41.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C41.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C118.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C118.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C118.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C118.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C57.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C57.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C57.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C57.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C72.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C72.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C72.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C72.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C312.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C312.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C312.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C312.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C32.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C32.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C32.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C32.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C213.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C213.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C213.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C213.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C33.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C33.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C33.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C33.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C219.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C219.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C219.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C219.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C56.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C56.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C56.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C56.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C152.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C152.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C152.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C152.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C278.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C278.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C278.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C278.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C84.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C84.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C84.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C84.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C139.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C139.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C139.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C139.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C50.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C50.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C50.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C50.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C295.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C295.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C295.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C295.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C3.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C3.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C3.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C3.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C246.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C246.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C246.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C246.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C133.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C133.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C133.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C133.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C14.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C14.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C14.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C14.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C100.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C100.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C100.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C100.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C204.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C204.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C204.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C204.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C76.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C76.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C76.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C76.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C286.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C286.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C286.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C286.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C253.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C253.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C253.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C253.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C125.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C125.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C125.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C125.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C178.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C178.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C178.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C178.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C164.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C164.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C164.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C164.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C19.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C19.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C19.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C19.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C45.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C45.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C45.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C45.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C292.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C292.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C292.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C292.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C85.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C85.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C85.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C85.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C212.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C212.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C212.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C212.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C244.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C244.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C244.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C244.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C234.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C234.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C234.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C234.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C273.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C273.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C273.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C273.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C30.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C30.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C30.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C30.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C96.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C96.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C96.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C96.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C220.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C220.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C220.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C220.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C36.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C36.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C36.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C36.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C214.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C214.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C214.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C214.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C26.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C26.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C26.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C26.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C48.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C48.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C48.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C48.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C193.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C193.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C193.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C193.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C199.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C199.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C199.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C199.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C53.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C53.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C53.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C53.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C82.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C82.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C82.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C82.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C268.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C268.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C268.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C268.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C147.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C147.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C147.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C147.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C170.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C170.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C170.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C170.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C12.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C12.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C12.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C12.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C98.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C98.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C98.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C98.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C232.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C232.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C232.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C232.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C311.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C311.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C311.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C311.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C267.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C267.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C267.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C267.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C291.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C291.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C291.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C291.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C74.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C74.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C74.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C74.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C184.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C184.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C184.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C184.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C176.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C176.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C176.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C176.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C227.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C227.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C227.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C227.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C86.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C86.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C86.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C86.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C301.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C301.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C301.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C301.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C105.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C105.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C105.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C105.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C174.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C174.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C174.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C174.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C103.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C103.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C103.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C103.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C43.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C43.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C43.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C43.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C75.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C75.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C75.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C75.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C172.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C172.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C172.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C172.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C290.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C290.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C290.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C290.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C149.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C149.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C149.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C149.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C102.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C102.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C102.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C102.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C294.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C294.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C294.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C294.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C196.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C196.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C196.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C196.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C34.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C34.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C34.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C34.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C46.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C46.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C46.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C46.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C200.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C200.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C200.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C200.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C20.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C20.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C20.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C20.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C250.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C250.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C250.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C250.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C108.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C108.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C108.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C108.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C180.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C180.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C180.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C180.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C209.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C209.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C209.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C209.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C87.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C87.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C87.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C87.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C44.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C44.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C44.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C44.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C28.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C28.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C28.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C28.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C156.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C156.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C156.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C156.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C157.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C157.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C157.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C157.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C70.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C70.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C70.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C70.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C280.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C280.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C280.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C280.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C285.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C285.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C285.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C285.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C68.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C68.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C68.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C68.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C185.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C185.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C185.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C185.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C10.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C10.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C10.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C10.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C257.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C257.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C257.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C257.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C80.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C80.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C80.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C80.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C27.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C27.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C27.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C27.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C283.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C283.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C283.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C283.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C29.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C29.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C29.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C29.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C293.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C293.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C293.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C293.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C216.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C216.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C216.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C216.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C37.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C37.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C37.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C37.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C162.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C162.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C162.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C162.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C116.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C116.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C116.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C116.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C127.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C127.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C127.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C127.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C264.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C264.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C264.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C264.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C206.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C206.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C206.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C206.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C104.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C104.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C104.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C104.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C289.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C289.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C289.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C289.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C138.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C138.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C138.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C138.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C121.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C121.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C121.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C121.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C215.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C215.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C215.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C215.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C93.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C93.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C93.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C93.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C203.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C203.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C203.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C203.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C64.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C64.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C64.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C64.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C245.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C245.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C245.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C245.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C202.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C202.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C202.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C202.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C148.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C148.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C148.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C148.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C122.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C122.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C122.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C122.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C61.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C61.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C61.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C61.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C124.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C124.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C124.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C124.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C179.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C179.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C179.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C179.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C310.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C310.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C310.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C310.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C187.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C187.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C187.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C187.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C114.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C114.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C114.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C114.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C238.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C238.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C238.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C238.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C99.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C99.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C99.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C99.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C309.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C309.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C309.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C309.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C308.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C308.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C308.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C308.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C231.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C231.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C231.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C231.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C194.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C194.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C194.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C194.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C71.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C71.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C71.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C71.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C177.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C177.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C177.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C177.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C298.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C298.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C298.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C298.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C317.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C317.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C317.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C317.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C151.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C151.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C151.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C151.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C79.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C79.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C79.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C79.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C210.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C210.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C210.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C210.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C318.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C318.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C318.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C318.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C297.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C297.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C297.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C297.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C83.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C83.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C83.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C83.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C263.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C263.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C263.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C263.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C7.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C7.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C7.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C7.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C163.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C163.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C163.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C163.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C229.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C229.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C229.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C229.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C276.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C276.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C276.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C276.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C18.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C18.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C18.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C18.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C106.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C106.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C106.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C106.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C305.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C305.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C305.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C305.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C287.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C287.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C287.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C287.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C132.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C132.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C132.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C132.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C38.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C38.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C38.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C38.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C243.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C243.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C243.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C243.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C288.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C288.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C288.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C288.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C90.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C90.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C90.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C90.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C197.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C197.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C197.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C197.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C13.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C13.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C13.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C13.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C42.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C42.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C42.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C42.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C167.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C167.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C167.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C167.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C101.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C101.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C101.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C101.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C240.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C240.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C240.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C240.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C248.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C248.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C248.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C248.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C89.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C89.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C89.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C89.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C8.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C8.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C8.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C8.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C62.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C62.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C62.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C62.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C192.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C192.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C192.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C192.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C22.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C22.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C22.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C22.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C237.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C237.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C237.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C237.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C55.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C55.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C55.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C55.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C299.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C299.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C299.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C299.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C230.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C230.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C230.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C230.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C307.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C307.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C307.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C307.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C131.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C131.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C131.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C131.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C207.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C207.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C207.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C207.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C154.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C154.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C154.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C154.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C224.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C224.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C224.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C224.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C113.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C113.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C113.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C113.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C67.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C67.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C67.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C67.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C49.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C49.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C49.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C49.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C65.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C65.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C65.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C65.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C211.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C211.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C211.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C211.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C186.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C186.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C186.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C186.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C136.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C136.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C136.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C136.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C15.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C15.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C15.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C15.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C40.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C40.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C40.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C40.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C173.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C173.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C173.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C173.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C175.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C175.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C175.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C175.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C189.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C189.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C189.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C189.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C5.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C5.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C5.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C5.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C168.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C168.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C168.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C168.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C23.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C23.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C23.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C23.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C142.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C142.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C142.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C142.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C143.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C143.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C143.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C143.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C107.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C107.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C107.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C107.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C58.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C58.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C58.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C58.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C6.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C6.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C6.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C6.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C158.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C158.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C158.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C158.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C134.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C134.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C134.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C134.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C31.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C31.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C31.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C31.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C1.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C1.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C1.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C1.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C141.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C141.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C141.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C141.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C63.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C63.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C63.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C63.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C165.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C165.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C165.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C165.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C284.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C284.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C284.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C284.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C66.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C66.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C66.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C66.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C92.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C92.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C92.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C92.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C181.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C181.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C181.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C181.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C256.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C256.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C256.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C256.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C266.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C266.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C266.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C266.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C259.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C259.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C259.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C259.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C282.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C282.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C282.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C282.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C153.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C153.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C153.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C153.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C77.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C77.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C77.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C77.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C94.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C94.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C94.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C94.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C191.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C191.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C191.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C191.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C35.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C35.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C35.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C35.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C52.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C52.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C52.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C52.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C274.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C274.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C274.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C274.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C300.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C300.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C300.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C300.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C130.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C130.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C130.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C130.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C242.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C242.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C242.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C242.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C275.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C275.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C275.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C275.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C261.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C261.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C261.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C261.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C54.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C54.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C54.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C54.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C69.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C69.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C69.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C69.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C161.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C161.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C161.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C161.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C254.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C254.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C254.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C254.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C135.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C135.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C135.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C135.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C270.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C270.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C270.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C270.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C279.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C279.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C279.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C279.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C315.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C315.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C315.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C315.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C221.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C221.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C221.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C221.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C150.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C150.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C150.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C150.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C17.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C17.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C17.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C17.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C39.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C39.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C39.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C39.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C144.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C144.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C144.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C144.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C4.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C4.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C4.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C4.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C313.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C313.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C313.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C313.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C195.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C195.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C195.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C195.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C228.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C228.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C228.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C228.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C226.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C226.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C226.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C226.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C51.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C51.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C51.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C51.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C208.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C208.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C208.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C208.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C73.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C73.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C73.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C73.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C260.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C260.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C260.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C260.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C201.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C201.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C201.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C201.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C190.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C190.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C190.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C190.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C81.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C81.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C81.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C81.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C198.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C198.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C198.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C198.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C21.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C21.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C21.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C21.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C235.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C235.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C235.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C235.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C233.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C233.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C233.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C233.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C316.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C316.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C316.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C316.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C247.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C247.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C247.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C247.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C252.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C252.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C252.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C252.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C166.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C166.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C166.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C166.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C155.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C155.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C155.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C155.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C129.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C129.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C129.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C129.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C272.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C272.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C272.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C272.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C225.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C225.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C225.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C225.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C115.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C115.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C115.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C115.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C24.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C24.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C24.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C24.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C47.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C47.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C47.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C47.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C182.1/L001_1.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C182.1/L001_1.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C182.1/L001_2.cbcl' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/Data/Intensities/BaseCalls/L001/C182.1/L001_2.cbcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.barcode_1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.barcode_2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.barcode_1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.barcode_1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.barcode_2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/barcode_double.params' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/barcode_double.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.barcode_1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.barcode_2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.barcode_2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CACCTAGTACTCGAGT.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/TTGCGGCCGGTTTAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.barcode_1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/CCCCGCTTTTGCGTGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.1.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/GCTATAGTCCAGCAGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.barcode_2.fastq' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/fastq/NN.barcode_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/sams/TTGCGGCCGGTTTAAC.sam' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/sams/TTGCGGCCGGTTTAAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/sams/GCTATAGTCCAGCAGC.sam' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/sams/GCTATAGTCCAGCAGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/sams/barcode_double.params' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/sams/barcode_double.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/sams/CCCCGCTTTTGCGTGT.sam' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/sams/CCCCGCTTTTGCGTGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/sams/NN.sam' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/sams/NN.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/151T8B8B151T_cbcl/sams/CACCTAGTACTCGAGT.sam' -> `./testdata/picard/illumina/151T8B8B151T_cbcl/sams/CACCTAGTACTCGAGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGCTGCTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGCTGCTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCAGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCAGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGCATGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGCATGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTGTAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTGTAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ATTATCAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ATTATCAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CGCTATGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CGCTATGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCTGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCTGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/N.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/N.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GATATCCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GATATCCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AACAATGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AACAATGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TACCGTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TACCGTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTATGCGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTATGCGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGAAAAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGAAAAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CCAACATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CCAACATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GAACGAT..sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GAACGAT..sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACAGTTGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACAGTTGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGTAATCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGTAATCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAACTCTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAACTCTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AACGCATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AACGCATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TAAGCACA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TAAGCACA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACTGTATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACTGTATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GTAACATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GTAACATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TCCGTCTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TCCGTCTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCCATG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCCATG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/barcode.params' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TTGTCTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TTGTCTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACAGGTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACAGGTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAATAGTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAATAGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TCGCTAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TCGCTAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CCATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CCATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCTAAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCTAAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GAAGGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GAAGGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAATAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAATAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGCAAGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGCAAGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AAAAGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AAAAGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGGTCGCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGGTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCAGGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GACCAGGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACTGTACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACTGTACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GTCCACAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GTCCACAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ATTCCTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ATTCCTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTAACTCG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CTAACTCG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TCTGCAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TCTGCAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCCAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCCAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACAAAATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACAAAATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACGAAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACGAAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCTCGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TATCTCGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CCAGCACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CCAGCACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACCAGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACCAGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGGTAAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/AGGTAAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CAGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/CGCCTTCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/CGCCTTCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACTAAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/ACTAAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GCCTAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GCCTAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/GCCGTCGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/GCCGTCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGTAACTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M4M/TGTAACTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TGCTGCTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TGCTGCTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GACCAGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GACCAGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AGCATGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AGCATGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CTGTAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CTGTAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ATTATCAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ATTATCAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CGCTATGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CGCTATGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TATCTGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TATCTGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/N.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/N.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GATATCCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GATATCCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AACAATGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AACAATGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CTATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CTATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TACCGTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TACCGTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CTATGCGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CTATGCGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AGAAAAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AGAAAAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CCAACATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CCAACATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GAACGAT..sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GAACGAT..sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACAGTTGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACAGTTGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TGTAATCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TGTAATCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CAACTCTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CAACTCTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AACGCATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AACGCATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GACCGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GACCGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TAAGCACA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TAAGCACA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACTGTATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACTGTATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GTAACATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GTAACATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TCCGTCTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TCCGTCTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TATCCATG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TATCCATG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/barcode.params' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TTGTCTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TTGTCTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACAGGTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACAGGTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CAATAGTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CAATAGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TCGCTAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TCGCTAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CCATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CCATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GACCTAAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GACCTAAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GAAGGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GAAGGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CAATAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CAATAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TGCAAGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TGCAAGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TATCAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TATCAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AAAAGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AAAAGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AGGTCGCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AGGTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GACCAGGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GACCAGGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACTGTACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACTGTACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GTCCACAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GTCCACAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ATTCCTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ATTCCTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CTGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CTGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CTAACTCG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CTAACTCG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TCTGCAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TCTGCAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TATCCAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TATCCAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACAAAATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACAAAATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACGAAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACGAAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TATCTCGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TATCTCGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CCAGCACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CCAGCACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACCAGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACCAGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/AGGTAAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/AGGTAAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CAGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CAGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/CGCCTTCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/CGCCTTCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/multiplexed_positive_rgtags.params' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/multiplexed_positive_rgtags.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/ACTAAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/ACTAAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GCCTAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GCCTAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/GCCGTCGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/GCCGTCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/TGTAACTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/TGTAACTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAGGAAG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAGGAAG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGTAATC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGTAATC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCTGCAAG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCTGCAAG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCTGCTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCTGCTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGAT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGAT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGCATGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGCATGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTCGCA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTCGCA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGTAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGTAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCATG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCATG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTATCAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTATCAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCTATGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCTATGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAAGCACA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAAGCACA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTCCTCT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTCCTCT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGTA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGTA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCTAAC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCTAAC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACAATGG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACAATGG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/N.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/N.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GATATCCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GATATCCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACAATGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACAATGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAAAAAA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAAAAAA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAACTCTC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAACTCTC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TTGTCTAT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TTGTCTAT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAATCA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAATCA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAACGAT..sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAACGAT..sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TACCGTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TACCGTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTCGG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTCGG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACCAGTTG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACCAGTTG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGAAAAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGAAAAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAACATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAACATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTACC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTACC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAACGAT..sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAACGAT..sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGTTGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGTTGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAATCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAATCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCTATGT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCTATGT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTATC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTATC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAACTCTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAACTCTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACGCATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACGCATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTATCAA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTATCAA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACGAAATC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACGAAATC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTCCACAG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTCCACAG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAGCACC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAGCACC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAAGCACA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAAGCACA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/N.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/N.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCAAGTA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCAAGTA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGTC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGTC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAACATT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAACATT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTAAGAC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTAAGAC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTAACATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTAACATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCCGTCTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCCGTCTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCATG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCATG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/barcode.params' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTAACTCG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTAACTCG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAAAATT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAAAATT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TTGTCTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TTGTCTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGGTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGGTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCTGCTG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCTGCTG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCGCTAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCGCTAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCATGCGT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCATGCGT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCTAAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCTAAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAGGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GAAGGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGAAAAGA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGAAAAGA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TACCGTCT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TACCGTCT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAAAAA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAAAAA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAGCGGTA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TAGCGGTA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCAAGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGCAAGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAACTC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAACTC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGGTAT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGGTAT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTCGCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCAGGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCAGG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCAGG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCCTTCC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCCTTCC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCCGTCTA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCCGTCTA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCGTTG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GACCGTTG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAGAAG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AAAAGAAG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGTTGA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAGTTGA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTGTACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGCGGAT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGCGGAT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCGCTAGA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCGCTAGA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGCATGGA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGCATGGA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTCCACAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTCCACAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCAGCC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCAGCC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCTAGCC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCTAGCC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTCCTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ATTCCTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTGCC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTGCC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTATGCGC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTAACTCG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CTAACTCG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCTGCAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TCTGCAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCCAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTAAGG.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTAAGG.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAAAATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACAAAATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCGTCGA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCGTCGA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACGAAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACGAAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTCGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TATCTCGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAGCACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CCAGCACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACCAGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACCAGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTAACATC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GTAACATC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTAAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AGGTAAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGAC.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAATAGAC.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CAGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCCTTCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/CGCCTTCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTAAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/ACTAAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACGCATT.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/AACGCATT.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCTAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCTAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCGTCGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GCCGTCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GATATCCA.sam.bak' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/GATATCCA.sam.bak' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAACTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/indicies/TGTAACTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGCTGCTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGCTGCTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCAGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCAGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGCATGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGCATGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTGTAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTGTAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ATTATCAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ATTATCAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CGCTATGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CGCTATGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCTGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCTGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GATATCCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GATATCCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AACAATGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AACAATGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TACCGTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TACCGTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTATGCGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTATGCGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGAAAAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGAAAAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CCAACATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CCAACATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GAACGAT..sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GAACGAT..sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACAGTTGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACAGTTGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGTAATCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGTAATCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAACTCTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAACTCTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AACGCATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AACGCATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TAAGCACA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TAAGCACA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACTGTATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACTGTATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GTAACATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GTAACATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TCCGTCTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TCCGTCTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCCATG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCCATG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TTGTCTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TTGTCTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACAGGTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACAGGTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAATAGTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAATAGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TCGCTAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TCGCTAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CCATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CCATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCTAAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCTAAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GAAGGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GAAGGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAATAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAATAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGCAAGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGCAAGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AAAAGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AAAAGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGGTCGCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGGTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCAGGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GACCAGGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACTGTACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACTGTACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GTCCACAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GTCCACAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ATTCCTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ATTCCTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTAACTCG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CTAACTCG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TCTGCAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TCTGCAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCCAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCCAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACAAAATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACAAAATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACGAAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACGAAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCTCGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TATCTCGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CCAGCACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CCAGCACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACCAGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACCAGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGGTAAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/AGGTAAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CAGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CGCCTTCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/CGCCTTCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACTAAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/ACTAAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GCCTAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GCCTAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GCCGTCGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/GCCGTCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGTAACTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/templates/TGTAACTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/final/nonBarcodedWithMolecularIndex4M4M.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/final/nonBarcodedWithMolecularIndex4M4M.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/final/nonBarcodedWithMolecularIndex8M.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/final/nonBarcodedWithMolecularIndex8M.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams_with_4M/final/nonBarcoded.sam' -> `./testdata/picard/illumina/25T8B25T/sams_with_4M/final/nonBarcoded.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/mp_barcode.params' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/mp_barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCCGTCTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCTGCAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTAAGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGCGGAT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGAC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCTATGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCGTCGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCAGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGAT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGTTGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAAAAAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAGCACC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAACGAT..barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCTGCTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCTAAC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACGCATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AACAATGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAAAATT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGGTCGCA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCATGCGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TACCGTCT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTCCTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAATCA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAATAGTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGCAAGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCAGCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAAGCACA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GATATCCA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TTGTCTAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCGTTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTGTAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ATTATCAA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GACCAGGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAGCGGTA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACCAGTTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTAAGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTCCACAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CGCCTTCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCCATG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GAAGGAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CAACTCTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GTAACATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/N.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGCATGGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACTGTACC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TATCTCGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AAAAGAAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CCAACATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/GCCTAGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TGTAACTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/AGAAAAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACGAAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTAACTCG.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/CTATGCGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TCGCTAGA.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.index_2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/ACAGGTAT.index_2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M4M/TAGCGGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/N.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/N.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/mp_barcode.params' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/mp_barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/N.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/N.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGGTAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTAACTCG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCCGTCTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCTGCAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/N.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/N.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTAAGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGCGGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGAC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCTATGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGGTCGCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCTAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCGTCGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCAGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAGTTGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAAAAAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAGCACC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TCGCTAGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAACGAT..barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCTGCTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACGCATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GATATCCA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAATCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AACAATGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACAAAATT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCATGCGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TACCGTCT.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTCCTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAAGCACA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAATAGTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGCAAGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCAGCC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAGCGGTA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAAAAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TTGTCTAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCGTTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTGTAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ATTATCAA.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GACCAGGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACCAGTTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTAAGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTATC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTCCACAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CGCCTTCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCCATG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GAAGGAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CAACTCTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GTAACATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/N.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/N.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGCATGGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACTGTACC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TATCTCGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.index_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AAAAGAAG.index_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CCAACATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/GCCTAGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TGTAACTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/AGAAAAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/ACGAAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/CTATGCGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq_with_4M/TAGCGGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/s_1_2101_barcode.txt.gz' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/s_1_2101_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/s_1_1201_barcode.txt.gz' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/s_1_1201_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/s_1_1101_barcode.txt.gz' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/s_1_1101_barcode.txt.gz' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_1201.filter' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_1201.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_2101.filter' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_2101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/s_1_1101.filter' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C11.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C9.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C16.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C25.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C2.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C41.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C57.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C32.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C33.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C56.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C50.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C3.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C14.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C19.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C45.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C30.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C36.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C26.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C48.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C53.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C12.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C43.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C34.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C46.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C20.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C44.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C28.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C10.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C27.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C29.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C37.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C7.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C18.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C38.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C13.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C42.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C8.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C22.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C55.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C49.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C15.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C40.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C5.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C23.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C58.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C6.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C31.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C1.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C35.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C52.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C54.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C17.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C39.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C4.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C51.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C21.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C24.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_2101.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_2101.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1201.bcl' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/BaseCalls/L001/C47.1/s_1_1201.bcl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/L001/s_1_1101.clocs' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/L001/s_1_1101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/L001/s_1_1201.clocs' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/L001/s_1_1201.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/Data/Intensities/L001/s_1_2101.clocs' -> `./testdata/picard/illumina/25T8B25T/Data/Intensities/L001/s_1_2101.clocs' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GATATCCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GATATCCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCGCTAGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCGCTAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/testMultiplexRH.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/testMultiplexRH.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTGTATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTGTATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGGTAAGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGGTAAGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACCAGTTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACCAGTTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AACAATGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AACAATGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAACTCTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAACTCTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCGCTAGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCGCTAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TACCGTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TACCGTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GTAACATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GTAACATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGGTAAGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGGTAAGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TAGCGGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TAGCGGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TTGTCTAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TTGTCTAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCCATG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCCATG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CGCTATGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CGCTATGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AAAAAAAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AAAAAAAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAAAAAAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAAAAAAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/mp_barcode.params' -> `./testdata/picard/illumina/25T8B25T/fastq/mp_barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTATGCGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTATGCGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGTAACTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGTAACTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGGTAAGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGGTAAGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CGCTATGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CGCTATGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTGCGGAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTGCGGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ATTATCAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ATTATCAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TTGTCTAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TTGTCTAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTGTATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTGTATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TACCGTCT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TACCGTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAACTCTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAACTCTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTATGCGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTATGCGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCTAAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCTAAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGGTCGCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGGTCGCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AACAATGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AACAATGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCCAGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCCAGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CGCCTTCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CGCCTTCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GATATCCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GATATCCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAGGTAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAGGTAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTAACTCG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTAACTCG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAGCGGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAGCGGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TAAGCACA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TAAGCACA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GTAACATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GTAACATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCAGCACC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCAGCACC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/testMultiplexRH.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/testMultiplexRH.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTAACTCG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTAACTCG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GCCGTCGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GCCGTCGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCAGCACC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCAGCACC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GATATCCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GATATCCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAGTTGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAGTTGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGCATGGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGCATGGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAATAGAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAATAGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAGGTAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAGGTAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/N.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/N.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AACGCATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AACGCATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ATTCCTCT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ATTCCTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAAAATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAAAATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCTCGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCTCGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGAAAAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGAAAAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGCATGGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGCATGGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCTGCAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCTGCAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAAAATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAAAATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAATAGTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAATAGTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GCCTAGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GCCTAGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCAGCACC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCAGCACC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTATGCGC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTATGCGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCAGGC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCAGGC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAGGTAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAGGTAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AAAAGAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AAAAGAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAAGGAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAAGGAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAGCGGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAGCGGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTGCGGAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTGCGGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTAACTCG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTAACTCG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAATAGTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAATAGTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGAAAAGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGAAAAGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAAAAAAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAAAAAAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCCATG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCCATG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCCAGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCCAGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAACGAT..2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAACGAT..2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAGTTGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAGTTGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAGCGGAT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAGCGGAT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAGCGGAT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAGCGGAT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAACGAT..1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAACGAT..1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTGTAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTGTAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCTGCAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCTGCAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/barcode.params' -> `./testdata/picard/illumina/25T8B25T/fastq/barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCCGTCTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCCGTCTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCCGTCTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCCGTCTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ATTATCAA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ATTATCAA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCCGTCTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCCGTCTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCAGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCAGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTGTAATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTGTAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCTGCAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCTGCAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AACGCATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AACGCATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTAAGAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTAAGAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGTAATCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGTAATCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/nonBarcoded.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/nonBarcoded.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCAGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCAGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTGTATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTGTATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/N.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/N.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCATGCGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCATGCGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCGTTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCGTTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAATAGAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAATAGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TCGCTAGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TCGCTAGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAATAGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAATAGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGTAACTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGTAACTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTGCGGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTGCGGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AAAAGAAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AAAAGAAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCTAAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCTAAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CGCCTTCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CGCCTTCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCTGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCTGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCAACATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCAACATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACCAGTTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACCAGTTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TAAGCACA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TAAGCACA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TAGCGGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TAGCGGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCAGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCAGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCTGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCTGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGGTCGCA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGGTCGCA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CGCTATGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CGCTATGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGGTCGCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGGTCGCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GCCGTCGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GCCGTCGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AAAAAAAA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AAAAAAAA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCAGGC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCAGGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AAAAGAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AAAAGAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCAGGA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCAGGA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAGCGGAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAGCGGAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCTAAC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCTAAC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAGCGGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAGCGGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGCAAGTA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGCAAGTA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTGTACC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTGTACC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGCTGCTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGCTGCTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TAAGCACA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TAAGCACA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCAGGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCAGGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GCCGTCGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GCCGTCGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TACCGTCT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TACCGTCT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACGAAATC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACGAAATC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAAAATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAAAATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCCAGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCCAGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGTAATCA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGTAATCA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGCAAGTA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGCAAGTA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGCTGCTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGCTGCTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTATGCGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTATGCGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACAGTTGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACAGTTGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GTCCACAG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GTCCACAG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAAAAAAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAAAAAAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAAGGAAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAAGGAAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCAGGA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCAGGA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GTCCACAG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GTCCACAG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCATGCGT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCATGCGT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAACGAT..barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAACGAT..barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGCTGCTG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGCTGCTG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCAACATT.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCAACATT.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AACGCATT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AACGCATT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ATTCCTCT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ATTCCTCT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGTAATCA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGTAATCA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AACAATGG.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AACAATGG.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ATTATCAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ATTATCAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTAAGAC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTAAGAC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCTCGG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCTCGG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/testMultiplex.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/testMultiplex.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/nonBarcoded.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/nonBarcoded.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCATGCGT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCATGCGT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTATGCGT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTATGCGT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ATTCCTCT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ATTCCTCT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCTGCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCTGCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/testMultiplex.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/testMultiplex.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCGTTG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCGTTG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAATAGTC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAATAGTC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGCAAGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGCAAGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AAAAAAAA.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AAAAAAAA.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACGAAATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACGAAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TTGTCTAT.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TTGTCTAT.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCGTTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCGTTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTGTAATC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTGTAATC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GACCAGGC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GACCAGGC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/testMultiplexRH.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/testMultiplexRH.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GCCTAGCC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GCCTAGCC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACCAGTTG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACCAGTTG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTAAGAC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTAAGAC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GTCCACAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GTCCACAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CGCCTTCC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CGCCTTCC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCCATG.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCCATG.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTGTACC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTGTACC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GAAGGAAG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GAAGGAAG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CAACTCTC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CAACTCTC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GTAACATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GTAACATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/N.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/N.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGCATGGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGCATGGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACTGTACC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACTGTACC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TATCTCGG.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TATCTCGG.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CCAACATT.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CCAACATT.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/GCCTAGCC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/GCCTAGCC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TGTAACTC.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TGTAACTC.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/AGAAAAGA.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/AGAAAAGA.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/ACGAAATC.barcode_1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/ACGAAATC.barcode_1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/CTATGCGC.2.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/CTATGCGC.2.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/fastq/TAGCGGTA.1.fastq' -> `./testdata/picard/illumina/25T8B25T/fastq/TAGCGGTA.1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TGCTGCTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TGCTGCTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GACCAGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GACCAGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AGCATGGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AGCATGGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CTGTAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CTGTAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ATTATCAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ATTATCAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CGCTATGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CGCTATGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TATCTGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TATCTGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GAAAAAAA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GAAAAAAA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/N.sam' -> `./testdata/picard/illumina/25T8B25T/sams/N.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GATATCCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GATATCCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AACAATGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AACAATGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithMolecularIndex4M4M.sam' -> `./testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithMolecularIndex4M4M.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CTATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CTATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TACCGTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TACCGTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CTATGCGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CTATGCGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AGAAAAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AGAAAAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CCAACATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CCAACATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GAACGAT..sam' -> `./testdata/picard/illumina/25T8B25T/sams/GAACGAT..sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACAGTTGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACAGTTGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TGTAATCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TGTAATCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CAACTCTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CAACTCTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AACGCATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AACGCATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GACCGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GACCGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TAAGCACA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TAAGCACA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACTGTATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACTGTATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GTAACATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GTAACATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TCCGTCTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TCCGTCTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TATCCATG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TATCCATG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/barcode.params' -> `./testdata/picard/illumina/25T8B25T/sams/barcode.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TTGTCTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TTGTCTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACAGGTAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACAGGTAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CAATAGTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CAATAGTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TCGCTAGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TCGCTAGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CCATGCGT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CCATGCGT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GACCTAAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GACCTAAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GAAGGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GAAGGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CAATAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CAATAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TGCAAGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TGCAAGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TATCAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TATCAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AAAAGAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AAAAGAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AGGTCGCA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AGGTCGCA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GACCAGGC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GACCAGGC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithMolecularIndex8M.sam' -> `./testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithMolecularIndex8M.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACTGTACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACTGTACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GTCCACAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GTCCACAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ATTCCTCT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ATTCCTCT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CTGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CTGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CTAACTCG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CTAACTCG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TCTGCAAG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TCTGCAAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TATCCAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TATCCAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/nonBarcoded.sam' -> `./testdata/picard/illumina/25T8B25T/sams/nonBarcoded.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CAGCGGTA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CAGCGGTA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACAAAATT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACAAAATT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACGAAATC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACGAAATC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TATCTCGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TATCTCGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CCAGCACC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CCAGCACC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithTagPerMolecularIndex4M4M.sam' -> `./testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithTagPerMolecularIndex4M4M.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithTagPerMolecularIndex2M2M2M2M.sam' -> `./testdata/picard/illumina/25T8B25T/sams/nonBarcodedWithTagPerMolecularIndex2M2M2M2M.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACCAGTTG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACCAGTTG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/AGGTAAGG.sam' -> `./testdata/picard/illumina/25T8B25T/sams/AGGTAAGG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CAGCGGAT.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CAGCGGAT.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/CGCCTTCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/CGCCTTCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/multiplexed_positive_rgtags.params' -> `./testdata/picard/illumina/25T8B25T/sams/multiplexed_positive_rgtags.params' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/ACTAAGAC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/ACTAAGAC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GCCTAGCC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GCCTAGCC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/GCCGTCGA.sam' -> `./testdata/picard/illumina/25T8B25T/sams/GCCGTCGA.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/illumina/25T8B25T/sams/TGTAACTC.sam' -> `./testdata/picard/illumina/25T8B25T/sams/TGTAACTC.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/invalid_coord_sort_order.sam' -> `./testdata/picard/sam/invalid_coord_sort_order.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/revert_sam_sample_library_override.sam' -> `./testdata/picard/sam/revert_sam_sample_library_override.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/duplicate_sequence_names.fasta' -> `./testdata/picard/sam/duplicate_sequence_names.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/revert_sam_basic.sam' -> `./testdata/picard/sam/revert_sam_basic.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/otherhalfaligned.sam' -> `./testdata/picard/sam/otherhalfaligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/aligned.sam' -> `./testdata/picard/sam/aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/insert_size_metrics_test.sam' -> `./testdata/picard/sam/insert_size_metrics_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/split_test2.sam' -> `./testdata/picard/sam/split_test2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/viewsam_intervals_test.sam' -> `./testdata/picard/sam/viewsam_intervals_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/summary_alignment_stats_test.fasta' -> `./testdata/picard/sam/summary_alignment_stats_test.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/forMetrics.sam' -> `./testdata/picard/sam/forMetrics.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/revert_sam_valid_output_map.txt' -> `./testdata/picard/sam/revert_sam_valid_output_map.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/summary_alignment_bisulfite_test.sam' -> `./testdata/picard/sam/summary_alignment_bisulfite_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/aligned_queryname_sorted.bam' -> `./testdata/picard/sam/aligned_queryname_sorted.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/largeIntervals.interval_list' -> `./testdata/picard/sam/largeIntervals.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/unmapped.sam' -> `./testdata/picard/sam/unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/merger.dict' -> `./testdata/picard/sam/merger.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/namesorted.test.sam' -> `./testdata/picard/sam/namesorted.test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/summary_alignment_stats_test.sam' -> `./testdata/picard/sam/summary_alignment_stats_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/revert_sam_positive_test_output_map.txt' -> `./testdata/picard/sam/revert_sam_positive_test_output_map.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/aligned_queryname_sorted.sam' -> `./testdata/picard/sam/aligned_queryname_sorted.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/basic.fasta' -> `./testdata/picard/sam/basic.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/summary_alignment_stats_test_multiple.sam' -> `./testdata/picard/sam/summary_alignment_stats_test_multiple.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/merger.2.dict' -> `./testdata/picard/sam/merger.2.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/onePos.interval_list' -> `./testdata/picard/sam/onePos.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/merger.fasta' -> `./testdata/picard/sam/merger.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/revert_sam_bad_header_output_map.txt' -> `./testdata/picard/sam/revert_sam_bad_header_output_map.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/viewsam_intervals_test.interval_list' -> `./testdata/picard/sam/viewsam_intervals_test.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/contiguous.interval_list' -> `./testdata/picard/sam/contiguous.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/revert_sam_single_end.sam' -> `./testdata/picard/sam/revert_sam_single_end.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/summary_alignment_stats_test_chimeras.sam' -> `./testdata/picard/sam/summary_alignment_stats_test_chimeras.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/split_test.sam' -> `./testdata/picard/sam/split_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/summary_alignment_stats_test2.sam' -> `./testdata/picard/sam/summary_alignment_stats_test2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/onehalfaligned.sam' -> `./testdata/picard/sam/onehalfaligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/FixMateInformation/missingMate.sam' -> `./testdata/picard/sam/FixMateInformation/missingMate.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr7.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr7.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr8.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr8.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr5.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr5.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indUnknownChrom.bam' -> `./testdata/picard/sam/GatherBamFiles/indUnknownChrom.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr4.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr4.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr3.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr3.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr1.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr1.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr6.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr6.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/indchr2.bam' -> `./testdata/picard/sam/GatherBamFiles/indchr2.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/GatherBamFiles/orig.bam' -> `./testdata/picard/sam/GatherBamFiles/orig.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/PositionalDownsampleSam/header.dict' -> `./testdata/picard/sam/PositionalDownsampleSam/header.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/FilterSamReads/filter1.interval_list' -> `./testdata/picard/sam/FilterSamReads/filter1.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/FilterSamReads/filterOddStarts.js' -> `./testdata/picard/sam/FilterSamReads/filterOddStarts.js' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/FilterSamReads/filter2.interval_list' -> `./testdata/picard/sam/FilterSamReads/filter2.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/FilterSamReads/filterReadsWithout5primeSoftClip.js' -> `./testdata/picard/sam/FilterSamReads/filterReadsWithout5primeSoftClip.js' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/SamFileConverterTest/unmapped.bam' -> `./testdata/picard/sam/SamFileConverterTest/unmapped.bam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/SamFileConverterTest/unmapped.cram' -> `./testdata/picard/sam/SamFileConverterTest/unmapped.cram' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/SamFileConverterTest/unmapped.sam' -> `./testdata/picard/sam/SamFileConverterTest/unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case1/chr11sub_file2.sam' -> `./testdata/picard/sam/MergeSamFiles/case1/chr11sub_file2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case1/chr11sub_file1.sam' -> `./testdata/picard/sam/MergeSamFiles/case1/chr11sub_file1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case1/expected_output.sam' -> `./testdata/picard/sam/MergeSamFiles/case1/expected_output.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/unsorted_input/2.sam' -> `./testdata/picard/sam/MergeSamFiles/unsorted_input/2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/unsorted_input/1.sam' -> `./testdata/picard/sam/MergeSamFiles/unsorted_input/1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case2/chr11sub_file2.sam' -> `./testdata/picard/sam/MergeSamFiles/case2/chr11sub_file2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case2/chr11sub_file1.sam' -> `./testdata/picard/sam/MergeSamFiles/case2/chr11sub_file1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case2/expected_output.sam' -> `./testdata/picard/sam/MergeSamFiles/case2/expected_output.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case2/chr11sub_file3.sam' -> `./testdata/picard/sam/MergeSamFiles/case2/chr11sub_file3.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeSamFiles/case2/chr11sub_file4.sam' -> `./testdata/picard/sam/MergeSamFiles/case2/chr11sub_file4.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/unsorted.sam' -> `./testdata/picard/sam/CompareSAMs/unsorted.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/genomic_sorted.sam' -> `./testdata/picard/sam/CompareSAMs/genomic_sorted.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/example2.sam' -> `./testdata/picard/sam/CompareSAMs/example2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/group_same_coord_diff_order.sam' -> `./testdata/picard/sam/CompareSAMs/group_same_coord_diff_order.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/chr21.sam' -> `./testdata/picard/sam/CompareSAMs/chr21.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/genomic_sorted_5_plus.sam' -> `./testdata/picard/sam/CompareSAMs/genomic_sorted_5_plus.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/group_same_coord.sam' -> `./testdata/picard/sam/CompareSAMs/group_same_coord.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/diff_coords.sam' -> `./testdata/picard/sam/CompareSAMs/diff_coords.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/genomic_sorted_5.sam' -> `./testdata/picard/sam/CompareSAMs/genomic_sorted_5.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/bigger_seq_dict.sam' -> `./testdata/picard/sam/CompareSAMs/bigger_seq_dict.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/unmapped_first.sam' -> `./testdata/picard/sam/CompareSAMs/unmapped_first.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/genomic_sorted_same_position.sam' -> `./testdata/picard/sam/CompareSAMs/genomic_sorted_same_position.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/has_non_primary.sam' -> `./testdata/picard/sam/CompareSAMs/has_non_primary.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CompareSAMs/unmapped_second.sam' -> `./testdata/picard/sam/CompareSAMs/unmapped_second.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CleanSam/fits_with_deletion.sam' -> `./testdata/picard/sam/CleanSam/fits_with_deletion.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CleanSam/overhang_with_deletion.sam' -> `./testdata/picard/sam/CleanSam/overhang_with_deletion.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CleanSam/simple_fits.sam' -> `./testdata/picard/sam/CleanSam/simple_fits.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CleanSam/trailing_insertion.sam' -> `./testdata/picard/sam/CleanSam/trailing_insertion.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CleanSam/long_trailing_insertion.sam' -> `./testdata/picard/sam/CleanSam/long_trailing_insertion.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CleanSam/simple_overhang.sam' -> `./testdata/picard/sam/CleanSam/simple_overhang.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/README.txt' -> `./testdata/picard/sam/fastq2bam/README.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/permissive-format/s_1_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/permissive-format/s_1_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/permissive-format/pair2.txt' -> `./testdata/picard/sam/fastq2bam/permissive-format/pair2.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/permissive-format/s_1_2_sequence.txt' -> `./testdata/picard/sam/fastq2bam/permissive-format/s_1_2_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/permissive-format/s_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/permissive-format/s_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/permissive-format/pair1.txt' -> `./testdata/picard/sam/fastq2bam/permissive-format/pair1.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-sanger/README.txt' -> `./testdata/picard/sam/fastq2bam/fastq-sanger/README.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-sanger/5k-30BB2AAXX.3.aligned.sam.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-sanger/5k-30BB2AAXX.3.aligned.sam.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-sanger/sanger_full_range_as_sanger-63.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-sanger/sanger_full_range_as_sanger-63.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-sanger/5k-v1-Rhodobacter_LW1.sam.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-sanger/5k-v1-Rhodobacter_LW1.sam.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/sequential-files/paired_end_R2_002.fastq' -> `./testdata/picard/sam/fastq2bam/sequential-files/paired_end_R2_002.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/sequential-files/paired_end_R2_001.fastq' -> `./testdata/picard/sam/fastq2bam/sequential-files/paired_end_R2_001.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/sequential-files/single_end_R1_002.fastq' -> `./testdata/picard/sam/fastq2bam/sequential-files/single_end_R1_002.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/sequential-files/paired_end_R1_002.fastq' -> `./testdata/picard/sam/fastq2bam/sequential-files/paired_end_R1_002.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/sequential-files/single_end_R1_001.fastq' -> `./testdata/picard/sam/fastq2bam/sequential-files/single_end_R1_001.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/sequential-files/paired_end_R1_001.fastq' -> `./testdata/picard/sam/fastq2bam/sequential-files/paired_end_R1_001.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-illumina/README.txt' -> `./testdata/picard/sam/fastq2bam/fastq-illumina/README.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-illumina/s_1_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/fastq-illumina/s_1_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-illumina/s_1_2_sequence.txt' -> `./testdata/picard/sam/fastq2bam/fastq-illumina/s_1_2_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-illumina/s_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/fastq-illumina/s_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-illumina/illumina-sanger_full_range_as_sanger-62.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-illumina/illumina-sanger_full_range_as_sanger-62.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-solexa/README.txt' -> `./testdata/picard/sam/fastq2bam/fastq-solexa/README.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-solexa/s_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/fastq-solexa/s_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-solexa/solexa_full_range_as_sanger.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-solexa/solexa_full_range_as_sanger.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-solexa/solexa_full_range_as_solexa.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-solexa/solexa_full_range_as_solexa.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/fastq-solexa/bad1.fastq' -> `./testdata/picard/sam/fastq2bam/fastq-solexa/bad1.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair2-badnum.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair2-badnum.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair2-one-more-record.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair2-one-more-record.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair1-badnum.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair1-badnum.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair1-one-more-record.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair1-one-more-record.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair-b1.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair-b1.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair1-onetoken.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair1-onetoken.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair-b2.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair-b2.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/dott' -> `./testdata/picard/sam/fastq2bam/bad-paired/dott' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair-a2.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair-a2.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair-a1.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair-a1.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair2-diff-name.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair2-diff-name.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-paired/pair1-nonum.txt' -> `./testdata/picard/sam/fastq2bam/bad-paired/pair1-nonum.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/ok-paired/s_1_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/ok-paired/s_1_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/ok-paired/pair2.txt' -> `./testdata/picard/sam/fastq2bam/ok-paired/pair2.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/ok-paired/s_1_2_sequence.txt' -> `./testdata/picard/sam/fastq2bam/ok-paired/s_1_2_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/ok-paired/s_1_sequence.txt' -> `./testdata/picard/sam/fastq2bam/ok-paired/s_1_sequence.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/ok-paired/illumina-sanger_full_range_as_sanger-62.fastq' -> `./testdata/picard/sam/fastq2bam/ok-paired/illumina-sanger_full_range_as_sanger-62.fastq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/ok-paired/pair1.txt' -> `./testdata/picard/sam/fastq2bam/ok-paired/pair1.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/tt' -> `./testdata/picard/sam/fastq2bam/bad-format/tt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/bad-qual-header.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/bad-qual-header.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/0lines.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/0lines.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/bad-seq-header.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/bad-seq-header.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/1lines.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/1lines.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/extra-line.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/extra-line.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/2lines.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/2lines.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/3lines.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/3lines.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/fastq2bam/bad-format/too-many-quals.txt' -> `./testdata/picard/sam/fastq2bam/bad-format/too-many-quals.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/nonpaired/.gitignore' -> `./testdata/picard/sam/bam2fastq/nonpaired/.gitignore' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/README.txt' -> `./testdata/picard/sam/bam2fastq/paired/ok/README.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/first-mate-bof-last-mate-eof.sam' -> `./testdata/picard/sam/bam2fastq/paired/ok/first-mate-bof-last-mate-eof.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/sorted-pair-no-rg.sam' -> `./testdata/picard/sam/bam2fastq/paired/ok/sorted-pair-no-rg.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/clipping_test.sam' -> `./testdata/picard/sam/bam2fastq/paired/ok/clipping_test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/last-pair-mates-flipped.sam' -> `./testdata/picard/sam/bam2fastq/paired/ok/last-pair-mates-flipped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/sorted-pair.sam' -> `./testdata/picard/sam/bam2fastq/paired/ok/sorted-pair.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/ok/grouped-last-pair-mates-flipped.sam' -> `./testdata/picard/sam/bam2fastq/paired/ok/grouped-last-pair-mates-flipped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/bad/README.txt' -> `./testdata/picard/sam/bam2fastq/paired/bad/README.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/bad/unpaired-mate.sam' -> `./testdata/picard/sam/bam2fastq/paired/bad/unpaired-mate.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/bad/missing-rg-info.sam' -> `./testdata/picard/sam/bam2fastq/paired/bad/missing-rg-info.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/bam2fastq/paired/bad/grouped-unpaired-mate.sam' -> `./testdata/picard/sam/bam2fastq/paired/bad/grouped-unpaired-mate.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv3.sam' -> `./testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv3.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/merge1.sam' -> `./testdata/picard/sam/MarkDuplicates/merge1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndv2.sam' -> `./testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndv2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/optical_dupes.sam' -> `./testdata/picard/sam/MarkDuplicates/optical_dupes.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv1.sam' -> `./testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndv1.sam' -> `./testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndv1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/npe.perhaps.sam' -> `./testdata/picard/sam/MarkDuplicates/npe.perhaps.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv2.sam' -> `./testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/merge3.sam' -> `./testdata/picard/sam/MarkDuplicates/merge3.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv4.sam' -> `./testdata/picard/sam/MarkDuplicates/sameUnclipped5primeEndCoordinateSortedv4.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/merge2.sam' -> `./testdata/picard/sam/MarkDuplicates/merge2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/optical_dupes_casava.sam' -> `./testdata/picard/sam/MarkDuplicates/optical_dupes_casava.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MarkDuplicates/markDuplicatesWithMateCigar.pairSet.swap.sam' -> `./testdata/picard/sam/MarkDuplicates/markDuplicatesWithMateCigar.pairSet.swap.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/ValidateSamFile/good/sorted-pair.sam' -> `./testdata/picard/sam/ValidateSamFile/good/sorted-pair.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/ValidateSamFile/bad/unpaired-mate.sam' -> `./testdata/picard/sam/ValidateSamFile/bad/unpaired-mate.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/ValidateSamFile/bad/missing-rg-info.sam' -> `./testdata/picard/sam/ValidateSamFile/bad/missing-rg-info.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/ValidateSamFile/bad/grouped-unpaired-mate.sam' -> `./testdata/picard/sam/ValidateSamFile/bad/grouped-unpaired-mate.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/ValidateSamFile/bad/sorted-pair-missing-rg.sam' -> `./testdata/picard/sam/ValidateSamFile/bad/sorted-pair-missing-rg.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/cliptest.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/cliptest.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/contam.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/contam.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/multihit.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/multihit.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/multihit.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/multihit.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/removetags.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/removetags.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/allread1.trimmed.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/allread1.trimmed.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/cliptest.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/cliptest.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/contam.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/contam.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/contam.expected.NO_CHANGE.sam' -> `./testdata/picard/sam/MergeBamAlignment/contam.expected.NO_CHANGE.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/removetags.fasta.fai' -> `./testdata/picard/sam/MergeBamAlignment/removetags.fasta.fai' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/cliptest.dict' -> `./testdata/picard/sam/MergeBamAlignment/cliptest.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/aligned.badorder.sam' -> `./testdata/picard/sam/MergeBamAlignment/aligned.badorder.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/multihit.filter.fragment.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/multihit.filter.fragment.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.fasta' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/removetags.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/removetags.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/firsthalf.read2.trimmed.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/firsthalf.read2.trimmed.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/secondhalf.read2.trimmed.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/secondhalf.read2.trimmed.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/cliptest.fasta' -> `./testdata/picard/sam/MergeBamAlignment/cliptest.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/contam.expected.COPY_TO_TAG.sam' -> `./testdata/picard/sam/MergeBamAlignment/contam.expected.COPY_TO_TAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/multihit.filter.unmapped.sam' -> `./testdata/picard/sam/MergeBamAlignment/multihit.filter.unmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/aligned.both.strands.sam' -> `./testdata/picard/sam/MergeBamAlignment/aligned.both.strands.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/firsthalf.read1.trimmed.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/firsthalf.read1.trimmed.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/removetags.fasta' -> `./testdata/picard/sam/MergeBamAlignment/removetags.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.dict' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.expected.sam' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.expected.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/aligned.supplement.sam' -> `./testdata/picard/sam/MergeBamAlignment/aligned.supplement.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/secondhalf.read1.trimmed.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/secondhalf.read1.trimmed.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/contam.expected.MOVE_TO_TAG.sam' -> `./testdata/picard/sam/MergeBamAlignment/contam.expected.MOVE_TO_TAG.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.aligned.breaks.md5.sam' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.aligned.breaks.md5.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/allread2.trimmed.aligned.sam' -> `./testdata/picard/sam/MergeBamAlignment/allread2.trimmed.aligned.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/specialHeader.aligned.breaks.length.sam' -> `./testdata/picard/sam/MergeBamAlignment/specialHeader.aligned.breaks.length.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/unmapped.badorder.sam' -> `./testdata/picard/sam/MergeBamAlignment/unmapped.badorder.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/MergeBamAlignment/removetags.dict' -> `./testdata/picard/sam/MergeBamAlignment/removetags.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/EstimateLibraryComplexity/big_dupes_with_sos.sam' -> `./testdata/picard/sam/EstimateLibraryComplexity/big_dupes_with_sos.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/EstimateLibraryComplexity/dupes.sam' -> `./testdata/picard/sam/EstimateLibraryComplexity/dupes.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/EstimateLibraryComplexity/dupes_with_sos.sam' -> `./testdata/picard/sam/EstimateLibraryComplexity/dupes_with_sos.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/EstimateLibraryComplexity/big_dupes.sam' -> `./testdata/picard/sam/EstimateLibraryComplexity/big_dupes.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CollectGcBiasMetrics/MNOheader.dict' -> `./testdata/picard/sam/CollectGcBiasMetrics/MNOheader.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CollectGcBiasMetrics/MSmallHeader.dict' -> `./testdata/picard/sam/CollectGcBiasMetrics/MSmallHeader.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/sam/CollectGcBiasMetrics/Mheader.dict' -> `./testdata/picard/sam/CollectGcBiasMetrics/Mheader.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels-dissimilar-contigs.vcf' -> `./testdata/picard/vcf/CEUTrio-indels-dissimilar-contigs.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/normalize_alleles_truth.vcf' -> `./testdata/picard/vcf/normalize_alleles_truth.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-1.vcf' -> `./testdata/picard/vcf/CEUTrio-random-scatter-1.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-0.vcf' -> `./testdata/picard/vcf/CEUTrio-random-scatter-0.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-snps.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/IntervalListChr1Small.interval_list' -> `./testdata/picard/vcf/IntervalListChr1Small.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mini.dbsnp.vcf.idx' -> `./testdata/picard/vcf/mini.dbsnp.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-merged-indels-snps.vcf' -> `./testdata/picard/vcf/CEUTrio-merged-indels-snps.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-2.vcf' -> `./testdata/picard/vcf/CEUTrio-random-scatter-2.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels-no-contigs.vcf' -> `./testdata/picard/vcf/CEUTrio-indels-no-contigs.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mergeTest.emptyShard.variant_calling_detail_metrics' -> `./testdata/picard/vcf/mergeTest.emptyShard.variant_calling_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps.vcf' -> `./testdata/picard/vcf/CEUTrio-snps.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-2.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-random-scatter-2.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/vcfFormatTest.vcf.idx' -> `./testdata/picard/vcf/vcfFormatTest.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_del_line.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_del_line.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps-scrambled.2.vcf' -> `./testdata/picard/vcf/CEUTrio-snps-scrambled.2.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-5.vcf' -> `./testdata/picard/vcf/CEUTrio-random-scatter-5.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-5.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-random-scatter-5.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/IntervalList1PerChrom.interval_list' -> `./testdata/picard/vcf/IntervalList1PerChrom.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mergeTest.shard1.variant_calling_summary_metrics' -> `./testdata/picard/vcf/mergeTest.shard1.variant_calling_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_first_line_diff.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_first_line_diff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/testLiftoverFailingVariants.vcf' -> `./testdata/picard/vcf/testLiftoverFailingVariants.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mini.vcf.idx' -> `./testdata/picard/vcf/mini.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-indels.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/empty.vcf' -> `./testdata/picard/vcf/empty.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-0.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-random-scatter-0.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels-bad-samples.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-indels-bad-samples.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels-scrambled.1.vcf' -> `./testdata/picard/vcf/CEUTrio-indels-scrambled.1.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NA12878.ped' -> `./testdata/picard/vcf/NA12878.ped' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels-dissimilar-contigs.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-indels-dissimilar-contigs.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.vcf' -> `./testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NIST.selected.vcf.idx' -> `./testdata/picard/vcf/NIST.selected.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/testLiftoverUsingMissingContig.vcf' -> `./testdata/picard/vcf/testLiftoverUsingMissingContig.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/normalize_no_calls_truth.vcf' -> `./testdata/picard/vcf/normalize_no_calls_truth.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-merged-indels-snps.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-merged-indels-snps.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/testLiftoverMultiallelicIndels.vcf' -> `./testdata/picard/vcf/testLiftoverMultiallelicIndels.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/vcfFormatTest.scrambled.vcf' -> `./testdata/picard/vcf/vcfFormatTest.scrambled.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mini_gvcf.vcf' -> `./testdata/picard/vcf/mini_gvcf.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_AllRows.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mini.dbsnp.vcf' -> `./testdata/picard/vcf/mini.dbsnp.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-4.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-random-scatter-4.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/allHomRef.vcf' -> `./testdata/picard/vcf/allHomRef.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-4.vcf' -> `./testdata/picard/vcf/CEUTrio-random-scatter-4.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/dummy.reference.dict' -> `./testdata/picard/vcf/dummy.reference.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/normalize_no_calls_call.vcf' -> `./testdata/picard/vcf/normalize_no_calls_call.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps-scrambled.1.vcf' -> `./testdata/picard/vcf/CEUTrio-snps-scrambled.1.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_last_line_diff.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_last_line_diff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels-bad-samples.vcf' -> `./testdata/picard/vcf/CEUTrio-indels-bad-samples.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.vcf' -> `./testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-3.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-random-scatter-3.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio_plus_FAKE.vcf' -> `./testdata/picard/vcf/CEUTrio_plus_FAKE.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.vcf' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mergeTest.shard2.variant_calling_summary_metrics' -> `./testdata/picard/vcf/mergeTest.shard2.variant_calling_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/dummy.two.block.reference.fasta' -> `./testdata/picard/vcf/dummy.two.block.reference.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/test.over.chain' -> `./testdata/picard/vcf/test.over.chain' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-1.vcf.idx' -> `./testdata/picard/vcf/CEUTrio-random-scatter-1.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/normalize_alleles_call.vcf' -> `./testdata/picard/vcf/normalize_alleles_call.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/vcfFormatTest.bcf' -> `./testdata/picard/vcf/vcfFormatTest.bcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinGq.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/test.over.badContig.chain' -> `./testdata/picard/vcf/test.over.badContig.chain' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/vcfFormatTest.bad_dict.vcf' -> `./testdata/picard/vcf/vcfFormatTest.bad_dict.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mini.vcf' -> `./testdata/picard/vcf/mini.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-indels_vs_CEUTrio-indels_GtConcordanceDiff.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio_plus_FAKE.vcf.idx' -> `./testdata/picard/vcf/CEUTrio_plus_FAKE.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/vcfFormatTest.bcf.idx' -> `./testdata/picard/vcf/vcfFormatTest.bcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mergeTest.shard2.variant_calling_detail_metrics' -> `./testdata/picard/vcf/mergeTest.shard2.variant_calling_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_summary_metrics' -> `./testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-random-scatter-3.vcf' -> `./testdata/picard/vcf/CEUTrio-random-scatter-3.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mergeTest.emptyShard.variant_calling_summary_metrics' -> `./testdata/picard/vcf/mergeTest.emptyShard.variant_calling_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/test.two.block.over.chain' -> `./testdata/picard/vcf/test.two.block.over.chain' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mini_gvcf.vcf.idx' -> `./testdata/picard/vcf/mini_gvcf.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/empty.vcf.idx' -> `./testdata/picard/vcf/empty.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/testLiftoverBiallelicIndels.vcf' -> `./testdata/picard/vcf/testLiftoverBiallelicIndels.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_first_line_GtConcordanceDiff.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/mergeTest.shard1.variant_calling_detail_metrics' -> `./testdata/picard/vcf/mergeTest.shard1.variant_calling_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/dummy.reference.fasta' -> `./testdata/picard/vcf/dummy.reference.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NIST.selected.vcf' -> `./testdata/picard/vcf/NIST.selected.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/vcfFormatTest.vcf' -> `./testdata/picard/vcf/vcfFormatTest.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_last_line_GtConcordanceDiff.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-indels.vcf' -> `./testdata/picard/vcf/CEUTrio-indels.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_CEUTrio-snps_del_line_GtConcordanceDiff.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_contingency_metrics' -> `./testdata/picard/vcf/NIST-truth-snps_vs_CEUTrio-snps_GtConcordanceDiff.genotype_concordance_contingency_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.genotype_concordance_detail_metrics' -> `./testdata/picard/vcf/CEUTrio-snps_vs_CEUTrio-snps_GtConcordanceDiff_MinDp.genotype_concordance_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/filter/testFiltering.vcf' -> `./testdata/picard/vcf/filter/testFiltering.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/filter/testFilteringNoSeqDictionary.vcf' -> `./testdata/picard/vcf/filter/testFilteringNoSeqDictionary.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/chunking/multi_allelic_at_10M.vcf' -> `./testdata/picard/vcf/chunking/multi_allelic_at_10M.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/chunking/multi_allelic_at_10M.vcf.idx' -> `./testdata/picard/vcf/chunking/multi_allelic_at_10M.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/FixVcfHeaderTest/output.vcf' -> `./testdata/picard/vcf/FixVcfHeaderTest/output.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/FixVcfHeaderTest/header.vcf' -> `./testdata/picard/vcf/FixVcfHeaderTest/header.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/FixVcfHeaderTest/input.vcf' -> `./testdata/picard/vcf/FixVcfHeaderTest/input.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/vcf/FixVcfHeaderTest/header_with_extra_sample.vcf' -> `./testdata/picard/vcf/FixVcfHeaderTest/header_with_extra_sample.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/interval_list_to_bed_test.interval_list' -> `./testdata/picard/util/interval_list_to_bed_test.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/whitespace_text_file.txt' -> `./testdata/picard/util/whitespace_text_file.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/no_grouping_file.txt' -> `./testdata/picard/util/no_grouping_file.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/all_ones_text_file.txt' -> `./testdata/picard/util/all_ones_text_file.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/interval_list_to_bed_test.bed' -> `./testdata/picard/util/interval_list_to_bed_test.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/tabbed_text_file.txt' -> `./testdata/picard/util/tabbed_text_file.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/scatterable.interval_list' -> `./testdata/picard/util/scatterable.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/zero_base_interval.bed.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/zero_base_interval.bed.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/end_after_chr.bed' -> `./testdata/picard/util/BedToIntervalListTest/end_after_chr.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/header.sam' -> `./testdata/picard/util/BedToIntervalListTest/header.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.dict' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/end_before_chr.bed' -> `./testdata/picard/util/BedToIntervalListTest/end_before_chr.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/zero_base_interval.bed' -> `./testdata/picard/util/BedToIntervalListTest/zero_base_interval.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/one_base_interval.bed.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/one_base_interval.bed.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/simple.bed.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/simple.bed.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/extended.bed.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/extended.bed.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.fasta' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.bed' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/overlapping.bed' -> `./testdata/picard/util/BedToIntervalListTest/overlapping.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.bad.vcf' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.bad.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.sam' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/one_base_interval.bed' -> `./testdata/picard/util/BedToIntervalListTest/one_base_interval.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/simple.bed' -> `./testdata/picard/util/BedToIntervalListTest/simple.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.vcf' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/start_before_chr.bed' -> `./testdata/picard/util/BedToIntervalListTest/start_before_chr.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.bed.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.bed.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/extended.bed' -> `./testdata/picard/util/BedToIntervalListTest/extended.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/missing_chr.bed' -> `./testdata/picard/util/BedToIntervalListTest/missing_chr.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/start_after_chr.bed' -> `./testdata/picard/util/BedToIntervalListTest/start_after_chr.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/off_by_one_interval.bed' -> `./testdata/picard/util/BedToIntervalListTest/off_by_one_interval.bed' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.bad' -> `./testdata/picard/util/BedToIntervalListTest/seq_dict_test.dictionary.bad' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/util/BedToIntervalListTest/overlapping.bed.interval_list' -> `./testdata/picard/util/BedToIntervalListTest/overlapping.bed.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/reference/csd_dict.dict' -> `./testdata/picard/reference/csd_dict.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/reference/test.fasta' -> `./testdata/picard/reference/test.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/reference/test.intervals' -> `./testdata/picard/reference/test.intervals' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/reference/test.fasta.fai' -> `./testdata/picard/reference/test.fasta.fai' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/reference/test.dict' -> `./testdata/picard/reference/test.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrM.part.intervallist' -> `./testdata/picard/quality/chrM.part.intervallist' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsMatedRevOrder.sam' -> `./testdata/picard/quality/chrMReadsMatedRevOrder.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsMated.sam' -> `./testdata/picard/quality/chrMReadsMated.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsMateUnmapped.sam' -> `./testdata/picard/quality/chrMReadsMateUnmapped.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsSecondaryAlignSoft.sam' -> `./testdata/picard/quality/chrMReadsSecondaryAlignSoft.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsWithClips.sam' -> `./testdata/picard/quality/chrMReadsWithClips.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrM.single.interval_list' -> `./testdata/picard/quality/chrM.single.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsUnMated.sam' -> `./testdata/picard/quality/chrMReadsUnMated.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsSupplementalAlignSoft.sam' -> `./testdata/picard/quality/chrMReadsSupplementalAlignSoft.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsMatedRev.sam' -> `./testdata/picard/quality/chrMReadsMatedRev.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrM.reference.dict' -> `./testdata/picard/quality/chrM.reference.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReads.sam' -> `./testdata/picard/quality/chrMReads.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsMatedSameStrand.sam' -> `./testdata/picard/quality/chrMReadsMatedSameStrand.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrMReadsDiffereingLengths.sam' -> `./testdata/picard/quality/chrMReadsDiffereingLengths.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrM.reference.fasta' -> `./testdata/picard/quality/chrM.reference.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrM.reference.fasta.fai' -> `./testdata/picard/quality/chrM.reference.fasta.fai' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/quality/chrM.empty.interval_list' -> `./testdata/picard/quality/chrM.empty.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12891.vcf' -> `./testdata/picard/fingerprint/NA12891.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12891.fp.vcf' -> `./testdata/picard/fingerprint/NA12891.fp.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/haplotypeMap.vcf' -> `./testdata/picard/fingerprint/haplotypeMap.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12892.over.fingerprints.r1.sam' -> `./testdata/picard/fingerprint/NA12892.over.fingerprints.r1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12892.vcf' -> `./testdata/picard/fingerprint/NA12892.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/aligned_queryname_sorted.sam' -> `./testdata/picard/fingerprint/aligned_queryname_sorted.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12891.over.fingerprints.noRgTag.sam' -> `./testdata/picard/fingerprint/NA12891.over.fingerprints.noRgTag.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/Homo_sapiens_assembly19.haplotype_database.subset.txt' -> `./testdata/picard/fingerprint/Homo_sapiens_assembly19.haplotype_database.subset.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/reference.fasta' -> `./testdata/picard/fingerprint/reference.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12892.fp.vcf' -> `./testdata/picard/fingerprint/NA12892.fp.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12891_named_NA12892.over.fingerprints.r1.sam' -> `./testdata/picard/fingerprint/NA12891_named_NA12892.over.fingerprints.r1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12891.over.fingerprints.r2.sam' -> `./testdata/picard/fingerprint/NA12891.over.fingerprints.r2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12892.over.fingerprints.r2.sam' -> `./testdata/picard/fingerprint/NA12892.over.fingerprints.r2.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/reference.dict' -> `./testdata/picard/fingerprint/reference.dict' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/reference.fasta.fai' -> `./testdata/picard/fingerprint/reference.fasta.fai' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/NA12891.over.fingerprints.r1.sam' -> `./testdata/picard/fingerprint/NA12891.over.fingerprints.r1.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fingerprint/haplotypeMap.txt' -> `./testdata/picard/fingerprint/haplotypeMap.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/metrics/chrM_NO_SEQ.sam' -> `./testdata/picard/metrics/chrM_NO_SEQ.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/metrics/chrMNO.reference.fasta' -> `./testdata/picard/metrics/chrMNO.reference.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/metrics/chrMReads.sam' -> `./testdata/picard/metrics/chrMReads.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/metrics/chrM.reference.fasta' -> `./testdata/picard/metrics/chrM.reference.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectInsertSizeMetrics/multiple_orientation.sam.insert_size_metrics' -> `./testdata/picard/analysis/directed/CollectInsertSizeMetrics/multiple_orientation.sam.insert_size_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectHsMetrics/two-small.interval_list' -> `./testdata/picard/analysis/directed/CollectHsMetrics/two-small.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectHsMetrics/single-short-read.sam' -> `./testdata/picard/analysis/directed/CollectHsMetrics/single-short-read.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectHsMetrics/lowmapq.sam' -> `./testdata/picard/analysis/directed/CollectHsMetrics/lowmapq.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectHsMetrics/chrM.interval_list' -> `./testdata/picard/analysis/directed/CollectHsMetrics/chrM.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectHsMetrics/lowbaseq.sam' -> `./testdata/picard/analysis/directed/CollectHsMetrics/lowbaseq.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/directed/CollectHsMetrics/overlapping.sam' -> `./testdata/picard/analysis/directed/CollectHsMetrics/overlapping.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/TheoreticalSensitivity/test_25103070136.targeted_pcr_metrics' -> `./testdata/picard/analysis/TheoreticalSensitivity/test_25103070136.targeted_pcr_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/TheoreticalSensitivity/Solexa332667_DepthDist.histo' -> `./testdata/picard/analysis/TheoreticalSensitivity/Solexa332667_DepthDist.histo' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/TheoreticalSensitivity/test_Solexa-332667.wgs_metrics' -> `./testdata/picard/analysis/TheoreticalSensitivity/test_Solexa-332667.wgs_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/TheoreticalSensitivity/Solexa332667_BaseQ.histo' -> `./testdata/picard/analysis/TheoreticalSensitivity/Solexa332667_BaseQ.histo' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.interval_list' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.interval_list' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.dbsnp.vcf.idx' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.dbsnp.vcf.idx' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/readme.txt' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/readme.txt' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.dbsnp.vcf' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.dbsnp.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.fasta' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.fasta' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.sam' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/test.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.pre_adapter_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.pre_adapter_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.pre_adapter_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.pre_adapter_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.bait_bias_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.bait_bias_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.pre_adapter_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.pre_adapter_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.pre_adapter_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.pre_adapter_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.pre_adapter_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.pre_adapter_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.bait_bias_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.bait_bias_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.error_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.error_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.pre_adapter_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.pre_adapter_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.bait_bias_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.bait_bias_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.bait_bias_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.bait_bias_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.bait_bias_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.bait_bias_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.error_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.error_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.error_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.error_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.pre_adapter_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_context.pre_adapter_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.bait_bias_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.bait_bias_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.bait_bias_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.bait_bias_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.bait_bias_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.bait_bias_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.pre_adapter_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.pre_adapter_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.pre_adapter_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.pre_adapter_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.bait_bias_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.bait_bias_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.error_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_bq_cutoff.error_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.error_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.error_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.pre_adapter_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.pre_adapter_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.pre_adapter_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/no_mq_cutoff.pre_adapter_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.pre_adapter_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.pre_adapter_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.bait_bias_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_intervals.bait_bias_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.bait_bias_detail_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.bait_bias_detail_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.bait_bias_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/unmapped_mate.bait_bias_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.error_summary_metrics' -> `./testdata/picard/analysis/artifacts/CollectSequencingArtifactMetrics/ExpectedMetricsOutput/with_dbsnp.error_summary_metrics' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/hets_pos20.vcf' -> `./testdata/picard/independent_replicates/hets_pos20.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/hets_pos22_IncorrectAlleles.vcf' -> `./testdata/picard/independent_replicates/hets_pos22_IncorrectAlleles.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/hets_pos21_HOMREF_G.vcf' -> `./testdata/picard/independent_replicates/hets_pos21_HOMREF_G.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/twopairsWithUMIs.sam' -> `./testdata/picard/independent_replicates/twopairsWithUMIs.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/twopairs.sam' -> `./testdata/picard/independent_replicates/twopairs.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/twopairsWithUMIsMultipleOrientations.sam' -> `./testdata/picard/independent_replicates/twopairsWithUMIsMultipleOrientations.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/hets.vcf' -> `./testdata/picard/independent_replicates/hets.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/aTripleWithUMIs.sam' -> `./testdata/picard/independent_replicates/aTripleWithUMIs.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/twoSamplesHet.vcf' -> `./testdata/picard/independent_replicates/twoSamplesHet.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/multipleContigs.vcf' -> `./testdata/picard/independent_replicates/multipleContigs.vcf' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/aTriple.sam' -> `./testdata/picard/independent_replicates/aTriple.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/multipleContigs.sam' -> `./testdata/picard/independent_replicates/multipleContigs.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/independent_replicates/twopairsWithBadUMIs.sam' -> `./testdata/picard/independent_replicates/twopairsWithBadUMIs.sam' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fastq/bam_to_bfq_paired_test.0.1.bfq' -> `./testdata/picard/fastq/bam_to_bfq_paired_test.0.1.bfq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/testdata/picard/fastq/bam_to_bfq_test.0.1.bfq' -> `./testdata/picard/fastq/bam_to_bfq_test.0.1.bfq' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/etc/test/junit-noframes.xsl' -> `./etc/test/junit-noframes.xsl' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/etc/test/testng.css' -> `./etc/test/testng.css' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/gradle/wrapper/gradle-wrapper.properties' -> `./gradle/wrapper/gradle-wrapper.properties' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/gradle/wrapper/gradle-wrapper.jar' -> `./gradle/wrapper/gradle-wrapper.jar' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.github/PULL_REQUEST_TEMPLATE.md' -> `./.github/PULL_REQUEST_TEMPLATE.md' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/.github/ISSUE_TEMPLATE.md' -> `./.github/ISSUE_TEMPLATE.md' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/release_picard.sh' -> `./src/main/resources/release_picard.sh' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/docker_helper.sh' -> `./src/main/resources/picard/docker_helper.sh' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/rnaSeqCoverage.R' -> `./src/main/resources/picard/analysis/rnaSeqCoverage.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/wgsHistogram.R' -> `./src/main/resources/picard/analysis/wgsHistogram.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/baseDistributionByCycle.R' -> `./src/main/resources/picard/analysis/baseDistributionByCycle.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/meanQualityByCycle.R' -> `./src/main/resources/picard/analysis/meanQualityByCycle.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/qualityScoreDistribution.R' -> `./src/main/resources/picard/analysis/qualityScoreDistribution.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/rrbsQc.R' -> `./src/main/resources/picard/analysis/rrbsQc.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/gcBias.R' -> `./src/main/resources/picard/analysis/gcBias.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/resources/picard/analysis/insertSizeHistogram.R' -> `./src/main/resources/picard/analysis/insertSizeHistogram.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/PicardException.java' -> `./src/main/java/picard/PicardException.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/Test.java' -> `./src/main/java/picard/Test.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/CheckIlluminaDirectory.java' -> `./src/main/java/picard/illumina/CheckIlluminaDirectory.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/ClusterDataToSamConverter.java' -> `./src/main/java/picard/illumina/ClusterDataToSamConverter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/IlluminaLaneMetrics.java' -> `./src/main/java/picard/illumina/IlluminaLaneMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/LanePhasingMetricsCollector.java' -> `./src/main/java/picard/illumina/LanePhasingMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/NewIlluminaBasecallsConverter.java' -> `./src/main/java/picard/illumina/NewIlluminaBasecallsConverter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/IlluminaBasecallsToFastq.java' -> `./src/main/java/picard/illumina/IlluminaBasecallsToFastq.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/IlluminaPhasingMetrics.java' -> `./src/main/java/picard/illumina/IlluminaPhasingMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/ExtractIlluminaBarcodes.java' -> `./src/main/java/picard/illumina/ExtractIlluminaBarcodes.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/IlluminaBasecallsConverter.java' -> `./src/main/java/picard/illumina/IlluminaBasecallsConverter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/CollectIlluminaBasecallingMetrics.java' -> `./src/main/java/picard/illumina/CollectIlluminaBasecallingMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/MarkIlluminaAdapters.java' -> `./src/main/java/picard/illumina/MarkIlluminaAdapters.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/IlluminaBasecallsToSam.java' -> `./src/main/java/picard/illumina/IlluminaBasecallsToSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/BasecallsConverter.java' -> `./src/main/java/picard/illumina/BasecallsConverter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/CustomAdapterPair.java' -> `./src/main/java/picard/illumina/CustomAdapterPair.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/CollectIlluminaLaneMetrics.java' -> `./src/main/java/picard/illumina/CollectIlluminaLaneMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/IlluminaBasecallingMetrics.java' -> `./src/main/java/picard/illumina/IlluminaBasecallingMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/PosParser.java' -> `./src/main/java/picard/illumina/parser/PosParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ReadStructure.java' -> `./src/main/java/picard/illumina/parser/ReadStructure.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/TilePhasingValue.java' -> `./src/main/java/picard/illumina/parser/TilePhasingValue.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/PerTilePerCycleFileUtil.java' -> `./src/main/java/picard/illumina/parser/PerTilePerCycleFileUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/MultiTileFileUtil.java' -> `./src/main/java/picard/illumina/parser/MultiTileFileUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ClusterData.java' -> `./src/main/java/picard/illumina/parser/ClusterData.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/CycleIlluminaFileMap.java' -> `./src/main/java/picard/illumina/parser/CycleIlluminaFileMap.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ReadType.java' -> `./src/main/java/picard/illumina/parser/ReadType.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaParser.java' -> `./src/main/java/picard/illumina/parser/IlluminaParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaTextIterator.java' -> `./src/main/java/picard/illumina/parser/IlluminaTextIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaData.java' -> `./src/main/java/picard/illumina/parser/IlluminaData.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ReadData.java' -> `./src/main/java/picard/illumina/parser/ReadData.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/BclParser.java' -> `./src/main/java/picard/illumina/parser/BclParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaDataProviderFactory.java' -> `./src/main/java/picard/illumina/parser/IlluminaDataProviderFactory.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/PerTileCycleParser.java' -> `./src/main/java/picard/illumina/parser/PerTileCycleParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IntensityChannel.java' -> `./src/main/java/picard/illumina/parser/IntensityChannel.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ReadDescriptor.java' -> `./src/main/java/picard/illumina/parser/ReadDescriptor.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaFileMap.java' -> `./src/main/java/picard/illumina/parser/IlluminaFileMap.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/MultiTileBclParser.java' -> `./src/main/java/picard/illumina/parser/MultiTileBclParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/TileIndex.java' -> `./src/main/java/picard/illumina/parser/TileIndex.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/NewIlluminaDataProvider.java' -> `./src/main/java/picard/illumina/parser/NewIlluminaDataProvider.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/CbclData.java' -> `./src/main/java/picard/illumina/parser/CbclData.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaDataType.java' -> `./src/main/java/picard/illumina/parser/IlluminaDataType.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/FourChannelIntensityData.java' -> `./src/main/java/picard/illumina/parser/FourChannelIntensityData.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/MultiTileParser.java' -> `./src/main/java/picard/illumina/parser/MultiTileParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/PerTileParser.java' -> `./src/main/java/picard/illumina/parser/PerTileParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/TileMetricsUtil.java' -> `./src/main/java/picard/illumina/parser/TileMetricsUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/OutputMapping.java' -> `./src/main/java/picard/illumina/parser/OutputMapping.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ClusterIntensityFileReader.java' -> `./src/main/java/picard/illumina/parser/ClusterIntensityFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/TileTemplateRead.java' -> `./src/main/java/picard/illumina/parser/TileTemplateRead.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/BaseIlluminaDataProvider.java' -> `./src/main/java/picard/illumina/parser/BaseIlluminaDataProvider.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/Tile.java' -> `./src/main/java/picard/illumina/parser/Tile.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/MultiTileFilterParser.java' -> `./src/main/java/picard/illumina/parser/MultiTileFilterParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/MultiTileLocsParser.java' -> `./src/main/java/picard/illumina/parser/MultiTileLocsParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/Range.java' -> `./src/main/java/picard/illumina/parser/Range.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaFileNotFoundException.java' -> `./src/main/java/picard/illumina/parser/IlluminaFileNotFoundException.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/BclData.java' -> `./src/main/java/picard/illumina/parser/BclData.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/MultiTileBclFileUtil.java' -> `./src/main/java/picard/illumina/parser/MultiTileBclFileUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/FilterParser.java' -> `./src/main/java/picard/illumina/parser/FilterParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/ParameterizedFileUtil.java' -> `./src/main/java/picard/illumina/parser/ParameterizedFileUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaMetricsCode.java' -> `./src/main/java/picard/illumina/parser/IlluminaMetricsCode.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaDataProvider.java' -> `./src/main/java/picard/illumina/parser/IlluminaDataProvider.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/PerTileFileUtil.java' -> `./src/main/java/picard/illumina/parser/PerTileFileUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/IlluminaFileUtil.java' -> `./src/main/java/picard/illumina/parser/IlluminaFileUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/BarcodeParser.java' -> `./src/main/java/picard/illumina/parser/BarcodeParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/BarcodeFileReader.java' -> `./src/main/java/picard/illumina/parser/readers/BarcodeFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/FilterFileReader.java' -> `./src/main/java/picard/illumina/parser/readers/FilterFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/BclReader.java' -> `./src/main/java/picard/illumina/parser/readers/BclReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/EmpiricalPhasingMetricsOutReader.java' -> `./src/main/java/picard/illumina/parser/readers/EmpiricalPhasingMetricsOutReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/CbclReader.java' -> `./src/main/java/picard/illumina/parser/readers/CbclReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/MMapBackedIteratorFactory.java' -> `./src/main/java/picard/illumina/parser/readers/MMapBackedIteratorFactory.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/AbstractIlluminaPositionFileReader.java' -> `./src/main/java/picard/illumina/parser/readers/AbstractIlluminaPositionFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/BclQualityEvaluationStrategy.java' -> `./src/main/java/picard/illumina/parser/readers/BclQualityEvaluationStrategy.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/LocsFileReader.java' -> `./src/main/java/picard/illumina/parser/readers/LocsFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/ClocsFileReader.java' -> `./src/main/java/picard/illumina/parser/readers/ClocsFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/BclIndexReader.java' -> `./src/main/java/picard/illumina/parser/readers/BclIndexReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/PosFileReader.java' -> `./src/main/java/picard/illumina/parser/readers/PosFileReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/TileMetricsOutReader.java' -> `./src/main/java/picard/illumina/parser/readers/TileMetricsOutReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/readers/BaseBclReader.java' -> `./src/main/java/picard/illumina/parser/readers/BaseBclReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/BclFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/BclFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/FileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/FileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/BarcodeFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/BarcodeFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/LocsFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/LocsFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/FilterFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/FilterFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/MultiTileLocsFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/MultiTileLocsFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/PosFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/PosFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/BciFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/BciFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/ClocsFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/ClocsFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/parser/fakers/MultiTileBclFileFaker.java' -> `./src/main/java/picard/illumina/parser/fakers/MultiTileBclFileFaker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/illumina/quality/CollectHiSeqXPfFailMetrics.java' -> `./src/main/java/picard/illumina/quality/CollectHiSeqXPfFailMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SortSam.java' -> `./src/main/java/picard/sam/SortSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/MergeSamFiles.java' -> `./src/main/java/picard/sam/MergeSamFiles.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/DuplicationMetrics.java' -> `./src/main/java/picard/sam/DuplicationMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SetNmAndUqTags.java' -> `./src/main/java/picard/sam/SetNmAndUqTags.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/MultiHitAlignedReadIterator.java' -> `./src/main/java/picard/sam/MultiHitAlignedReadIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/AbstractAlignmentMerger.java' -> `./src/main/java/picard/sam/AbstractAlignmentMerger.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/GatherBamFiles.java' -> `./src/main/java/picard/sam/GatherBamFiles.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/FastqToSam.java' -> `./src/main/java/picard/sam/FastqToSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/FilterSamReads.java' -> `./src/main/java/picard/sam/FilterSamReads.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/BuildBamIndex.java' -> `./src/main/java/picard/sam/BuildBamIndex.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/ValidateSamFile.java' -> `./src/main/java/picard/sam/ValidateSamFile.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/BestEndMapqPrimaryAlignmentStrategy.java' -> `./src/main/java/picard/sam/BestEndMapqPrimaryAlignmentStrategy.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/ViewSam.java' -> `./src/main/java/picard/sam/ViewSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SetNmMdAndUqTags.java' -> `./src/main/java/picard/sam/SetNmMdAndUqTags.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/CompareSAMs.java' -> `./src/main/java/picard/sam/CompareSAMs.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/CreateSequenceDictionary.java' -> `./src/main/java/picard/sam/CreateSequenceDictionary.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SamFormatConverter.java' -> `./src/main/java/picard/sam/SamFormatConverter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/EarliestFragmentPrimaryAlignmentSelectionStrategy.java' -> `./src/main/java/picard/sam/EarliestFragmentPrimaryAlignmentSelectionStrategy.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/RevertSam.java' -> `./src/main/java/picard/sam/RevertSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SamAlignmentMerger.java' -> `./src/main/java/picard/sam/SamAlignmentMerger.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/BestMapqPrimaryAlignmentSelectionStrategy.java' -> `./src/main/java/picard/sam/BestMapqPrimaryAlignmentSelectionStrategy.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/CalculateReadGroupChecksum.java' -> `./src/main/java/picard/sam/CalculateReadGroupChecksum.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/ReplaceSamHeader.java' -> `./src/main/java/picard/sam/ReplaceSamHeader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar.java' -> `./src/main/java/picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/MergeBamAlignment.java' -> `./src/main/java/picard/sam/MergeBamAlignment.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/DownsampleSam.java' -> `./src/main/java/picard/sam/DownsampleSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/FixMateInformation.java' -> `./src/main/java/picard/sam/FixMateInformation.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/BamIndexStats.java' -> `./src/main/java/picard/sam/BamIndexStats.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/PrimaryAlignmentSelectionStrategy.java' -> `./src/main/java/picard/sam/PrimaryAlignmentSelectionStrategy.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/PositionBasedDownsampleSam.java' -> `./src/main/java/picard/sam/PositionBasedDownsampleSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/AddCommentsToBam.java' -> `./src/main/java/picard/sam/AddCommentsToBam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/AddOrReplaceReadGroups.java' -> `./src/main/java/picard/sam/AddOrReplaceReadGroups.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/CleanSam.java' -> `./src/main/java/picard/sam/CleanSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/HitsForInsert.java' -> `./src/main/java/picard/sam/HitsForInsert.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/ReorderSam.java' -> `./src/main/java/picard/sam/ReorderSam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SamToFastq.java' -> `./src/main/java/picard/sam/SamToFastq.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/CheckTerminatorBlock.java' -> `./src/main/java/picard/sam/CheckTerminatorBlock.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/MostDistantPrimaryAlignmentSelectionStrategy.java' -> `./src/main/java/picard/sam/MostDistantPrimaryAlignmentSelectionStrategy.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/SplitSamByLibrary.java' -> `./src/main/java/picard/sam/SplitSamByLibrary.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/util/RepresentativeReadIndexer.java' -> `./src/main/java/picard/sam/util/RepresentativeReadIndexer.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/util/PhysicalLocationInt.java' -> `./src/main/java/picard/sam/util/PhysicalLocationInt.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/util/ReadNameParser.java' -> `./src/main/java/picard/sam/util/ReadNameParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/util/PhysicalLocationShort.java' -> `./src/main/java/picard/sam/util/PhysicalLocationShort.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/util/PhysicalLocation.java' -> `./src/main/java/picard/sam/util/PhysicalLocation.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigar.java' -> `./src/main/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigar.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/ElcDuplicatesFinderResolver.java' -> `./src/main/java/picard/sam/markduplicates/ElcDuplicatesFinderResolver.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/ElcHashBasedDuplicatesFinder.java' -> `./src/main/java/picard/sam/markduplicates/ElcHashBasedDuplicatesFinder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigar.java' -> `./src/main/java/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigar.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/UmiGraph.java' -> `./src/main/java/picard/sam/markduplicates/UmiGraph.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/ElcDuplicatesFinder.java' -> `./src/main/java/picard/sam/markduplicates/ElcDuplicatesFinder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/MarkDuplicates.java' -> `./src/main/java/picard/sam/markduplicates/MarkDuplicates.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigar.java' -> `./src/main/java/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigar.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/UmiMetrics.java' -> `./src/main/java/picard/sam/markduplicates/UmiMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/EstimateLibraryComplexity.java' -> `./src/main/java/picard/sam/markduplicates/EstimateLibraryComplexity.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/UmiAwareDuplicateSetIterator.java' -> `./src/main/java/picard/sam/markduplicates/UmiAwareDuplicateSetIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigarIterator.java' -> `./src/main/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigarIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/ElcIdenticalBasesDuplicatesFinder.java' -> `./src/main/java/picard/sam/markduplicates/ElcIdenticalBasesDuplicatesFinder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/DiskBasedReadEndsForMarkDuplicatesMap.java' -> `./src/main/java/picard/sam/markduplicates/util/DiskBasedReadEndsForMarkDuplicatesMap.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEndsForMateCigar.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEndsForMateCigar.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/AbstractMarkDuplicatesCommandLineProgram.java' -> `./src/main/java/picard/sam/markduplicates/util/AbstractMarkDuplicatesCommandLineProgram.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/MemoryBasedReadEndsForMarkDuplicatesMap.java' -> `./src/main/java/picard/sam/markduplicates/util/MemoryBasedReadEndsForMarkDuplicatesMap.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicates.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicates.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/AbstractOpticalDuplicateFinderCommandLineProgram.java' -> `./src/main/java/picard/sam/markduplicates/util/AbstractOpticalDuplicateFinderCommandLineProgram.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesMap.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesMap.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEnds.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEnds.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/SamRecordWithOrdinalAndSetDuplicateReadFlag.java' -> `./src/main/java/picard/sam/markduplicates/util/SamRecordWithOrdinalAndSetDuplicateReadFlag.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/OpticalDuplicateFinder.java' -> `./src/main/java/picard/sam/markduplicates/util/OpticalDuplicateFinder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesWithBarcodesCodec.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesWithBarcodesCodec.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesWithBarcodes.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesWithBarcodes.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/PhysicalLocationForMateCigar.java' -> `./src/main/java/picard/sam/markduplicates/util/PhysicalLocationForMateCigar.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/RepresentativeReadIndexerCodec.java' -> `./src/main/java/picard/sam/markduplicates/util/RepresentativeReadIndexerCodec.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/MarkQueue.java' -> `./src/main/java/picard/sam/markduplicates/util/MarkQueue.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/LibraryIdGenerator.java' -> `./src/main/java/picard/sam/markduplicates/util/LibraryIdGenerator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesCodec.java' -> `./src/main/java/picard/sam/markduplicates/util/ReadEndsForMarkDuplicatesCodec.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/sam/markduplicates/util/PhysicalLocationForMateCigarSet.java' -> `./src/main/java/picard/sam/markduplicates/util/PhysicalLocationForMateCigarSet.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceStates.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceStates.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/SortVcf.java' -> `./src/main/java/picard/vcf/SortVcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceSchemeFactory.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceSchemeFactory.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/RenameSampleInVcf.java' -> `./src/main/java/picard/vcf/RenameSampleInVcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceStateCodes.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceStateCodes.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/ByIntervalListVariantContextIterator.java' -> `./src/main/java/picard/vcf/ByIntervalListVariantContextIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/VcfUtils.java' -> `./src/main/java/picard/vcf/VcfUtils.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceScheme.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceScheme.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/VcfToIntervalList.java' -> `./src/main/java/picard/vcf/VcfToIntervalList.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GvcfMetricAccumulator.java' -> `./src/main/java/picard/vcf/GvcfMetricAccumulator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/PairedVariantSubContextIterator.java' -> `./src/main/java/picard/vcf/PairedVariantSubContextIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/CallingMetricAccumulator.java' -> `./src/main/java/picard/vcf/CallingMetricAccumulator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GatherVcfs.java' -> `./src/main/java/picard/vcf/GatherVcfs.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/FixVcfHeader.java' -> `./src/main/java/picard/vcf/FixVcfHeader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/AccumulateVariantCallingMetrics.java' -> `./src/main/java/picard/vcf/AccumulateVariantCallingMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/MakeSitesOnlyVcf.java' -> `./src/main/java/picard/vcf/MakeSitesOnlyVcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/LiftoverVcf.java' -> `./src/main/java/picard/vcf/LiftoverVcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/SplitVcfs.java' -> `./src/main/java/picard/vcf/SplitVcfs.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/CollectVariantCallingMetrics.java' -> `./src/main/java/picard/vcf/CollectVariantCallingMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/MergeVcfs.java' -> `./src/main/java/picard/vcf/MergeVcfs.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceSummaryMetrics.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordance.java' -> `./src/main/java/picard/vcf/GenotypeConcordance.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GA4GHScheme.java' -> `./src/main/java/picard/vcf/GA4GHScheme.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GA4GHSchemeWithMissingAsHomRef.java' -> `./src/main/java/picard/vcf/GA4GHSchemeWithMissingAsHomRef.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceContingencyMetrics.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceContingencyMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceCounts.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceCounts.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/UpdateVcfSequenceDictionary.java' -> `./src/main/java/picard/vcf/UpdateVcfSequenceDictionary.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/VcfFormatConverter.java' -> `./src/main/java/picard/vcf/VcfFormatConverter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/GenotypeConcordanceDetailMetrics.java' -> `./src/main/java/picard/vcf/GenotypeConcordanceDetailMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/processor/VariantIteratorProducer.java' -> `./src/main/java/picard/vcf/processor/VariantIteratorProducer.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/processor/VcfFileSegment.java' -> `./src/main/java/picard/vcf/processor/VcfFileSegment.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/processor/VariantAccumulatorExecutor.java' -> `./src/main/java/picard/vcf/processor/VariantAccumulatorExecutor.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/processor/VcfFileSegmentGenerator.java' -> `./src/main/java/picard/vcf/processor/VcfFileSegmentGenerator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/processor/VariantProcessor.java' -> `./src/main/java/picard/vcf/processor/VariantProcessor.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/processor/util/PredicateFilterDecoratingClosableIterator.java' -> `./src/main/java/picard/vcf/processor/util/PredicateFilterDecoratingClosableIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/MendelianViolations/FindMendelianViolations.java' -> `./src/main/java/picard/vcf/MendelianViolations/FindMendelianViolations.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/MendelianViolations/MendelianViolationMetrics.java' -> `./src/main/java/picard/vcf/MendelianViolations/MendelianViolationMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/MendelianViolations/MendelianViolationsByFamily.java' -> `./src/main/java/picard/vcf/MendelianViolations/MendelianViolationsByFamily.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/MendelianViolations/MendelianViolationDetector.java' -> `./src/main/java/picard/vcf/MendelianViolations/MendelianViolationDetector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/FilterApplyingVariantIterator.java' -> `./src/main/java/picard/vcf/filter/FilterApplyingVariantIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/FilterVcf.java' -> `./src/main/java/picard/vcf/filter/FilterVcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/QdFilter.java' -> `./src/main/java/picard/vcf/filter/QdFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/DepthFilter.java' -> `./src/main/java/picard/vcf/filter/DepthFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/GenotypeQualityFilter.java' -> `./src/main/java/picard/vcf/filter/GenotypeQualityFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/FisherStrandFilter.java' -> `./src/main/java/picard/vcf/filter/FisherStrandFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/AlleleBalanceFilter.java' -> `./src/main/java/picard/vcf/filter/AlleleBalanceFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/GenotypeFilter.java' -> `./src/main/java/picard/vcf/filter/GenotypeFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/vcf/filter/VariantFilter.java' -> `./src/main/java/picard/vcf/filter/VariantFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/AsyncIterator.java' -> `./src/main/java/picard/util/AsyncIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/AdapterMarker.java' -> `./src/main/java/picard/util/AdapterMarker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/AtomicIterator.java' -> `./src/main/java/picard/util/AtomicIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/FifoBuffer.java' -> `./src/main/java/picard/util/FifoBuffer.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/ClippingUtility.java' -> `./src/main/java/picard/util/ClippingUtility.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/DbSnpBitSetUtil.java' -> `./src/main/java/picard/util/DbSnpBitSetUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/LiftOverIntervalList.java' -> `./src/main/java/picard/util/LiftOverIntervalList.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/MathUtil.java' -> `./src/main/java/picard/util/MathUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/ThreadPoolExecutorWithExceptions.java' -> `./src/main/java/picard/util/ThreadPoolExecutorWithExceptions.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/ReflectionUtil.java' -> `./src/main/java/picard/util/ReflectionUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/AbstractInputParser.java' -> `./src/main/java/picard/util/AbstractInputParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/QuerySortedReadPairIteratorUtil.java' -> `./src/main/java/picard/util/QuerySortedReadPairIteratorUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/IntervalListScatterer.java' -> `./src/main/java/picard/util/IntervalListScatterer.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/TabbedInputParser.java' -> `./src/main/java/picard/util/TabbedInputParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/Iterators.java' -> `./src/main/java/picard/util/Iterators.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/GraphUtils.java' -> `./src/main/java/picard/util/GraphUtils.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/TabbedTextFileWithHeaderParser.java' -> `./src/main/java/picard/util/TabbedTextFileWithHeaderParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/VariantType.java' -> `./src/main/java/picard/util/VariantType.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/UnsignedTypeUtil.java' -> `./src/main/java/picard/util/UnsignedTypeUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/IlluminaUtil.java' -> `./src/main/java/picard/util/IlluminaUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/AdapterPair.java' -> `./src/main/java/picard/util/AdapterPair.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/CircularByteBuffer.java' -> `./src/main/java/picard/util/CircularByteBuffer.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/RExecutor.java' -> `./src/main/java/picard/util/RExecutor.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/BedToIntervalList.java' -> `./src/main/java/picard/util/BedToIntervalList.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/FileChannelJDKBugWorkAround.java' -> `./src/main/java/picard/util/FileChannelJDKBugWorkAround.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/DelimitedTextFileWithHeaderIterator.java' -> `./src/main/java/picard/util/DelimitedTextFileWithHeaderIterator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/ScatterIntervalsByNs.java' -> `./src/main/java/picard/util/ScatterIntervalsByNs.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/IntervalListTools.java' -> `./src/main/java/picard/util/IntervalListTools.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/BasicInputParser.java' -> `./src/main/java/picard/util/BasicInputParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/IntervalListToBed.java' -> `./src/main/java/picard/util/IntervalListToBed.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/BaitDesigner.java' -> `./src/main/java/picard/util/BaitDesigner.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/CsvInputParser.java' -> `./src/main/java/picard/util/CsvInputParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/util/MetricsDoclet.java' -> `./src/main/java/picard/util/MetricsDoclet.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/annotation/RefFlatReader.java' -> `./src/main/java/picard/annotation/RefFlatReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/annotation/Gene.java' -> `./src/main/java/picard/annotation/Gene.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/annotation/AnnotationException.java' -> `./src/main/java/picard/annotation/AnnotationException.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/annotation/GeneAnnotationReader.java' -> `./src/main/java/picard/annotation/GeneAnnotationReader.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/annotation/LocusFunction.java' -> `./src/main/java/picard/annotation/LocusFunction.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/filter/CountingDuplicateFilter.java' -> `./src/main/java/picard/filter/CountingDuplicateFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/filter/CountingPairedFilter.java' -> `./src/main/java/picard/filter/CountingPairedFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/filter/CountingMapQFilter.java' -> `./src/main/java/picard/filter/CountingMapQFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/filter/CountingFilter.java' -> `./src/main/java/picard/filter/CountingFilter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/reference/ExtractSequences.java' -> `./src/main/java/picard/reference/ExtractSequences.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/reference/NormalizeFasta.java' -> `./src/main/java/picard/reference/NormalizeFasta.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/reference/NonNFastaSize.java' -> `./src/main/java/picard/reference/NonNFastaSize.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/pedigree/PedFile.java' -> `./src/main/java/picard/pedigree/PedFile.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/pedigree/Sex.java' -> `./src/main/java/picard/pedigree/Sex.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromContaminatorSequence.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromContaminatorSequence.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/MatchResults.java' -> `./src/main/java/picard/fingerprint/MatchResults.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/ClusteredCrosscheckMetric.java' -> `./src/main/java/picard/fingerprint/ClusteredCrosscheckMetric.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/LocusResult.java' -> `./src/main/java/picard/fingerprint/LocusResult.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/CheckFingerprint.java' -> `./src/main/java/picard/fingerprint/CheckFingerprint.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/DiploidGenotype.java' -> `./src/main/java/picard/fingerprint/DiploidGenotype.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/FingerprintIdDetails.java' -> `./src/main/java/picard/fingerprint/FingerprintIdDetails.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/Fingerprint.java' -> `./src/main/java/picard/fingerprint/Fingerprint.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromGenotypeLikelihoods.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromGenotypeLikelihoods.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/CrosscheckMetric.java' -> `./src/main/java/picard/fingerprint/CrosscheckMetric.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromSequence.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromSequence.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilityOfNormalGivenTumor.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilityOfNormalGivenTumor.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/DiploidHaplotype.java' -> `./src/main/java/picard/fingerprint/DiploidHaplotype.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilitiesUsingLogLikelihoods.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilitiesUsingLogLikelihoods.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/CrosscheckReadGroupFingerprints.java' -> `./src/main/java/picard/fingerprint/CrosscheckReadGroupFingerprints.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromGenotype.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilitiesFromGenotype.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeProbabilities.java' -> `./src/main/java/picard/fingerprint/HaplotypeProbabilities.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/FingerprintResults.java' -> `./src/main/java/picard/fingerprint/FingerprintResults.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/ClusterCrosscheckMetrics.java' -> `./src/main/java/picard/fingerprint/ClusterCrosscheckMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/CrosscheckFingerprints.java' -> `./src/main/java/picard/fingerprint/CrosscheckFingerprints.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/FingerprintChecker.java' -> `./src/main/java/picard/fingerprint/FingerprintChecker.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeMap.java' -> `./src/main/java/picard/fingerprint/HaplotypeMap.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/Snp.java' -> `./src/main/java/picard/fingerprint/Snp.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fingerprint/HaplotypeBlock.java' -> `./src/main/java/picard/fingerprint/HaplotypeBlock.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/MultilevelMetrics.java' -> `./src/main/java/picard/metrics/MultilevelMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/SAMRecordMultiLevelCollector.java' -> `./src/main/java/picard/metrics/SAMRecordMultiLevelCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/SAMRecordAndReferenceMultiLevelCollector.java' -> `./src/main/java/picard/metrics/SAMRecordAndReferenceMultiLevelCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/SAMRecordAndReference.java' -> `./src/main/java/picard/metrics/SAMRecordAndReference.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/GcBiasMetrics.java' -> `./src/main/java/picard/metrics/GcBiasMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/MultiLevelCollector.java' -> `./src/main/java/picard/metrics/MultiLevelCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/metrics/PerUnitMetricCollector.java' -> `./src/main/java/picard/metrics/PerUnitMetricCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineDefaults.java' -> `./src/main/java/picard/cmdline/CommandLineDefaults.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/StandardOptionDefinitions.java' -> `./src/main/java/picard/cmdline/StandardOptionDefinitions.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/PicardCommandLine.java' -> `./src/main/java/picard/cmdline/PicardCommandLine.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineParserDefinitionException.java' -> `./src/main/java/picard/cmdline/CommandLineParserDefinitionException.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CreateHtmlDocForStandardOptions.java' -> `./src/main/java/picard/cmdline/CreateHtmlDocForStandardOptions.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineProgram.java' -> `./src/main/java/picard/cmdline/CommandLineProgram.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/NestedOptions.java' -> `./src/main/java/picard/cmdline/NestedOptions.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineParseException.java' -> `./src/main/java/picard/cmdline/CommandLineParseException.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineParser.java' -> `./src/main/java/picard/cmdline/CommandLineParser.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CreateHtmlDocForProgram.java' -> `./src/main/java/picard/cmdline/CreateHtmlDocForProgram.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineProgramGroup.java' -> `./src/main/java/picard/cmdline/CommandLineProgramGroup.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/Option.java' -> `./src/main/java/picard/cmdline/Option.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/PositionalArguments.java' -> `./src/main/java/picard/cmdline/PositionalArguments.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/ClassFinder.java' -> `./src/main/java/picard/cmdline/ClassFinder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/CommandLineProgramProperties.java' -> `./src/main/java/picard/cmdline/CommandLineProgramProperties.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Fasta.java' -> `./src/main/java/picard/cmdline/programgroups/Fasta.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/None.java' -> `./src/main/java/picard/cmdline/programgroups/None.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/VcfOrBcf.java' -> `./src/main/java/picard/cmdline/programgroups/VcfOrBcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/SamOrBam.java' -> `./src/main/java/picard/cmdline/programgroups/SamOrBam.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Fingerprinting.java' -> `./src/main/java/picard/cmdline/programgroups/Fingerprinting.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Metrics.java' -> `./src/main/java/picard/cmdline/programgroups/Metrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Testing.java' -> `./src/main/java/picard/cmdline/programgroups/Testing.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Intervals.java' -> `./src/main/java/picard/cmdline/programgroups/Intervals.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Illumina.java' -> `./src/main/java/picard/cmdline/programgroups/Illumina.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/cmdline/programgroups/Alpha.java' -> `./src/main/java/picard/cmdline/programgroups/Alpha.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/MergeableMetricBase.java' -> `./src/main/java/picard/analysis/MergeableMetricBase.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/ChimeraUtil.java' -> `./src/main/java/picard/analysis/ChimeraUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectBaseDistributionByCycle.java' -> `./src/main/java/picard/analysis/CollectBaseDistributionByCycle.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectGcBiasMetrics.java' -> `./src/main/java/picard/analysis/CollectGcBiasMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectRnaSeqMetrics.java' -> `./src/main/java/picard/analysis/CollectRnaSeqMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/GcBiasMetricsCollector.java' -> `./src/main/java/picard/analysis/GcBiasMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/RrbsCpgDetailMetrics.java' -> `./src/main/java/picard/analysis/RrbsCpgDetailMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectWgsMetrics.java' -> `./src/main/java/picard/analysis/CollectWgsMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectInsertSizeMetrics.java' -> `./src/main/java/picard/analysis/CollectInsertSizeMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/InsertSizeMetrics.java' -> `./src/main/java/picard/analysis/InsertSizeMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectRrbsMetrics.java' -> `./src/main/java/picard/analysis/CollectRrbsMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/GcBiasUtils.java' -> `./src/main/java/picard/analysis/GcBiasUtils.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/GcBiasDetailMetrics.java' -> `./src/main/java/picard/analysis/GcBiasDetailMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CounterManager.java' -> `./src/main/java/picard/analysis/CounterManager.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CompareMetrics.java' -> `./src/main/java/picard/analysis/CompareMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/WgsMetricsProcessor.java' -> `./src/main/java/picard/analysis/WgsMetricsProcessor.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/AdapterUtility.java' -> `./src/main/java/picard/analysis/AdapterUtility.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/SinglePassSamProgram.java' -> `./src/main/java/picard/analysis/SinglePassSamProgram.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/AbstractWgsMetricsCollector.java' -> `./src/main/java/picard/analysis/AbstractWgsMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/JumpingLibraryMetrics.java' -> `./src/main/java/picard/analysis/JumpingLibraryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/AlignmentSummaryMetrics.java' -> `./src/main/java/picard/analysis/AlignmentSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectRawWgsMetrics.java' -> `./src/main/java/picard/analysis/CollectRawWgsMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectQualityYieldMetrics.java' -> `./src/main/java/picard/analysis/CollectQualityYieldMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectJumpingLibraryMetrics.java' -> `./src/main/java/picard/analysis/CollectJumpingLibraryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/FastWgsMetricsCollector.java' -> `./src/main/java/picard/analysis/FastWgsMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java' -> `./src/main/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverage.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectOxoGMetrics.java' -> `./src/main/java/picard/analysis/CollectOxoGMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/MetricAccumulationLevel.java' -> `./src/main/java/picard/analysis/MetricAccumulationLevel.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/WgsMetricsProcessorImpl.java' -> `./src/main/java/picard/analysis/WgsMetricsProcessorImpl.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/RnaSeqMetrics.java' -> `./src/main/java/picard/analysis/RnaSeqMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java' -> `./src/main/java/picard/analysis/CollectAlignmentSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java' -> `./src/main/java/picard/analysis/AlignmentSummaryMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/TheoreticalSensitivity.java' -> `./src/main/java/picard/analysis/TheoreticalSensitivity.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/RrbsMetrics.java' -> `./src/main/java/picard/analysis/RrbsMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/MeanQualityByCycle.java' -> `./src/main/java/picard/analysis/MeanQualityByCycle.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/FingerprintingSummaryMetrics.java' -> `./src/main/java/picard/analysis/FingerprintingSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/BaseDistributionByCycleMetrics.java' -> `./src/main/java/picard/analysis/BaseDistributionByCycleMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/CollectMultipleMetrics.java' -> `./src/main/java/picard/analysis/CollectMultipleMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/GcBiasSummaryMetrics.java' -> `./src/main/java/picard/analysis/GcBiasSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/FingerprintingDetailMetrics.java' -> `./src/main/java/picard/analysis/FingerprintingDetailMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/RrbsMetricsCollector.java' -> `./src/main/java/picard/analysis/RrbsMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/RrbsSummaryMetrics.java' -> `./src/main/java/picard/analysis/RrbsSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/QualityScoreDistribution.java' -> `./src/main/java/picard/analysis/QualityScoreDistribution.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/RnaSeqMetricsCollector.java' -> `./src/main/java/picard/analysis/directed/RnaSeqMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/TargetedPcrMetricsCollector.java' -> `./src/main/java/picard/analysis/directed/TargetedPcrMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/CollectTargetedPcrMetrics.java' -> `./src/main/java/picard/analysis/directed/CollectTargetedPcrMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/HsMetricCollector.java' -> `./src/main/java/picard/analysis/directed/HsMetricCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/CollectTargetedMetrics.java' -> `./src/main/java/picard/analysis/directed/CollectTargetedMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/InsertSizeMetricsCollector.java' -> `./src/main/java/picard/analysis/directed/InsertSizeMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/TargetedPcrMetrics.java' -> `./src/main/java/picard/analysis/directed/TargetedPcrMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/TargetMetricsCollector.java' -> `./src/main/java/picard/analysis/directed/TargetMetricsCollector.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/CollectHsMetrics.java' -> `./src/main/java/picard/analysis/directed/CollectHsMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/directed/HsMetrics.java' -> `./src/main/java/picard/analysis/directed/HsMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/replicates/IndependentReplicateMetric.java' -> `./src/main/java/picard/analysis/replicates/IndependentReplicateMetric.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/replicates/CollectIndependentReplicateMetrics.java' -> `./src/main/java/picard/analysis/replicates/CollectIndependentReplicateMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/ConvertSequencingArtifactToOxoG.java' -> `./src/main/java/picard/analysis/artifacts/ConvertSequencingArtifactToOxoG.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/SequencingArtifactMetrics.java' -> `./src/main/java/picard/analysis/artifacts/SequencingArtifactMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/ArtifactCounter.java' -> `./src/main/java/picard/analysis/artifacts/ArtifactCounter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/Transition.java' -> `./src/main/java/picard/analysis/artifacts/Transition.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/ContextAccumulator.java' -> `./src/main/java/picard/analysis/artifacts/ContextAccumulator.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/ErrorSummaryMetrics.java' -> `./src/main/java/picard/analysis/artifacts/ErrorSummaryMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/analysis/artifacts/CollectSequencingArtifactMetrics.java' -> `./src/main/java/picard/analysis/artifacts/CollectSequencingArtifactMetrics.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fastq/ReadNameEncoder.java' -> `./src/main/java/picard/fastq/ReadNameEncoder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fastq/Casava18ReadNameEncoder.java' -> `./src/main/java/picard/fastq/Casava18ReadNameEncoder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fastq/IlluminaReadNameEncoder.java' -> `./src/main/java/picard/fastq/IlluminaReadNameEncoder.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fastq/BamToBfq.java' -> `./src/main/java/picard/fastq/BamToBfq.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/main/java/picard/fastq/BamToBfqWriter.java' -> `./src/main/java/picard/fastq/BamToBfqWriter.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/resources/passing.R' -> `./src/test/resources/passing.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/resources/failing.R' -> `./src/test/resources/failing.R' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/resources/testng.xml' -> `./src/test/resources/testng.xml' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/CheckIlluminaDirectoryTest.java' -> `./src/test/java/picard/illumina/CheckIlluminaDirectoryTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/IlluminaLaneMetricsCollectorTest.java' -> `./src/test/java/picard/illumina/IlluminaLaneMetricsCollectorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/IlluminaBasecallsToSamTest.java' -> `./src/test/java/picard/illumina/IlluminaBasecallsToSamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/IlluminaBasecallsToFastqTest.java' -> `./src/test/java/picard/illumina/IlluminaBasecallsToFastqTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/CollectIlluminaBasecallingMetricsTest.java' -> `./src/test/java/picard/illumina/CollectIlluminaBasecallingMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/IlluminaBasecallsToSamAdapterClippingTest.java' -> `./src/test/java/picard/illumina/IlluminaBasecallsToSamAdapterClippingTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/ExtractIlluminaBarcodesTest.java' -> `./src/test/java/picard/illumina/ExtractIlluminaBarcodesTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/ReadStructureTest.java' -> `./src/test/java/picard/illumina/ReadStructureTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/FilterParserTest.java' -> `./src/test/java/picard/illumina/parser/FilterParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/PerTileParserTest.java' -> `./src/test/java/picard/illumina/parser/PerTileParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/CycleIlluminaFileMapTest.java' -> `./src/test/java/picard/illumina/parser/CycleIlluminaFileMapTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/PosParserTest.java' -> `./src/test/java/picard/illumina/parser/PosParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/BclParserTest.java' -> `./src/test/java/picard/illumina/parser/BclParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/IlluminaFileUtilTest.java' -> `./src/test/java/picard/illumina/parser/IlluminaFileUtilTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/IlluminaDataProviderTest.java' -> `./src/test/java/picard/illumina/parser/IlluminaDataProviderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/IlluminaDataProviderFactoryTest.java' -> `./src/test/java/picard/illumina/parser/IlluminaDataProviderFactoryTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/BinTdUtil.java' -> `./src/test/java/picard/illumina/parser/BinTdUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/PerTilePerCycleParserTest.java' -> `./src/test/java/picard/illumina/parser/PerTilePerCycleParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/ClocsFileReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/ClocsFileReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/AbstractIlluminaPositionFileReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/AbstractIlluminaPositionFileReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/PosFileReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/PosFileReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/LocsFileReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/LocsFileReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/MMapBackedIteratorFactoryTest.java' -> `./src/test/java/picard/illumina/parser/readers/MMapBackedIteratorFactoryTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/FilterFileReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/FilterFileReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/BclReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/BclReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/CbclReaderTest.java' -> `./src/test/java/picard/illumina/parser/readers/CbclReaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/readers/IlluminaFileUtilTest.java' -> `./src/test/java/picard/illumina/parser/readers/IlluminaFileUtilTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/illumina/parser/fakers/BclFileFakerTest.java' -> `./src/test/java/picard/illumina/parser/fakers/BclFileFakerTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/CleanSamTest.java' -> `./src/test/java/picard/sam/CleanSamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/SamFileConverterTest.java' -> `./src/test/java/picard/sam/SamFileConverterTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/PositionBasedDownsampleSamTest.java' -> `./src/test/java/picard/sam/PositionBasedDownsampleSamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/FastqToSamTest.java' -> `./src/test/java/picard/sam/FastqToSamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/ViewSamTest.java' -> `./src/test/java/picard/sam/ViewSamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/GatherBamFilesTest.java' -> `./src/test/java/picard/sam/GatherBamFilesTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/AddCommentsToBamTest.java' -> `./src/test/java/picard/sam/AddCommentsToBamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/SplitSamByLibraryTest.java' -> `./src/test/java/picard/sam/SplitSamByLibraryTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/FixMateInformationTest.java' -> `./src/test/java/picard/sam/FixMateInformationTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/MergeSamFilesTest.java' -> `./src/test/java/picard/sam/MergeSamFilesTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/MergeBamAlignmentTest.java' -> `./src/test/java/picard/sam/MergeBamAlignmentTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/DuplicationMetricsTest.java' -> `./src/test/java/picard/sam/DuplicationMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/SamToFastqTest.java' -> `./src/test/java/picard/sam/SamToFastqTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/RevertSamTest.java' -> `./src/test/java/picard/sam/RevertSamTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/AbstractAlignmentMergerTest.java' -> `./src/test/java/picard/sam/AbstractAlignmentMergerTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/ValidateSamFileTest.java' -> `./src/test/java/picard/sam/ValidateSamFileTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/FilterSamReadsTest.java' -> `./src/test/java/picard/sam/FilterSamReadsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/SetNmMdAndUqTagsTest.java' -> `./src/test/java/picard/sam/SetNmMdAndUqTagsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/CreateSequenceDictionaryTest.java' -> `./src/test/java/picard/sam/CreateSequenceDictionaryTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/CompareSAMsTest.java' -> `./src/test/java/picard/sam/CompareSAMsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/testers/SamFileTester.java' -> `./src/test/java/picard/sam/testers/SamFileTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/testers/CleanSamTester.java' -> `./src/test/java/picard/sam/testers/CleanSamTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/testers/ValidateSamTester.java' -> `./src/test/java/picard/sam/testers/ValidateSamTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/util/ReadNameParserTests.java' -> `./src/test/java/picard/sam/util/ReadNameParserTests.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/BySumOfBaseQAndInOriginalOrderMDTester.java' -> `./src/test/java/picard/sam/markduplicates/BySumOfBaseQAndInOriginalOrderMDTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigarTester.java' -> `./src/test/java/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigarTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicatesTagRepresentativeReadIndexTester.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicatesTagRepresentativeReadIndexTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/ElcHashBasedDuplicatesFinderTest.java' -> `./src/test/java/picard/sam/markduplicates/ElcHashBasedDuplicatesFinderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/ElcIdenticalBasesDuplicatesFinderTest.java' -> `./src/test/java/picard/sam/markduplicates/ElcIdenticalBasesDuplicatesFinderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigarTester.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigarTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingBarcodeTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingBarcodeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingReadOneBarcodeTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingReadOneBarcodeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigarTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicatesWithMateCigarTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicatesTester.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicatesTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/QuerySortedMarkDuplicatesTester.java' -> `./src/test/java/picard/sam/markduplicates/QuerySortedMarkDuplicatesTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/AbstractMarkDuplicatesCommandLineProgramTest.java' -> `./src/test/java/picard/sam/markduplicates/AbstractMarkDuplicatesCommandLineProgramTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicatesTagRepresentativeReadIndexTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicatesTagRepresentativeReadIndexTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigarTester.java' -> `./src/test/java/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigarTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/EstimateLibraryComplexityTest.java' -> `./src/test/java/picard/sam/markduplicates/EstimateLibraryComplexityTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigarTest.java' -> `./src/test/java/picard/sam/markduplicates/SimpleMarkDuplicatesWithMateCigarTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/AsIsMarkDuplicatesTester.java' -> `./src/test/java/picard/sam/markduplicates/AsIsMarkDuplicatesTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingSampleBarcodeTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingSampleBarcodeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicatesTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicatesTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/AbstractMarkDuplicatesCommandLineProgramTester.java' -> `./src/test/java/picard/sam/markduplicates/AbstractMarkDuplicatesCommandLineProgramTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigarTest.java' -> `./src/test/java/picard/sam/markduplicates/UmiAwareMarkDuplicatesWithMateCigarTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingReadTwoBarcodeTest.java' -> `./src/test/java/picard/sam/markduplicates/MarkDuplicateWithMissingReadTwoBarcodeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/sam/markduplicates/util/OpticalDuplicateFinderTest.java' -> `./src/test/java/picard/sam/markduplicates/util/OpticalDuplicateFinderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/CollectVariantCallingMetricsTest.java' -> `./src/test/java/picard/vcf/CollectVariantCallingMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/FixVcfHeaderTest.java' -> `./src/test/java/picard/vcf/FixVcfHeaderTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/VariantContextComparatorTest.java' -> `./src/test/java/picard/vcf/VariantContextComparatorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/SamTestUtils.java' -> `./src/test/java/picard/vcf/SamTestUtils.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/GenotypeConcordanceTest.java' -> `./src/test/java/picard/vcf/GenotypeConcordanceTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/CallingMetricAccumulatorTest.java' -> `./src/test/java/picard/vcf/CallingMetricAccumulatorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/ByIntervalListVariantContextIteratorTest.java' -> `./src/test/java/picard/vcf/ByIntervalListVariantContextIteratorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/SortVcfsTest.java' -> `./src/test/java/picard/vcf/SortVcfsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/SplitVcfsTest.java' -> `./src/test/java/picard/vcf/SplitVcfsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/VcfTestUtils.java' -> `./src/test/java/picard/vcf/VcfTestUtils.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/LiftoverVcfTest.java' -> `./src/test/java/picard/vcf/LiftoverVcfTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/AccumulateVariantCallingMetricsTest.java' -> `./src/test/java/picard/vcf/AccumulateVariantCallingMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/UpdateVcfSequenceDictionaryTest.java' -> `./src/test/java/picard/vcf/UpdateVcfSequenceDictionaryTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/MergeVcfsTest.java' -> `./src/test/java/picard/vcf/MergeVcfsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/AbstractVcfMergingClpTester.java' -> `./src/test/java/picard/vcf/AbstractVcfMergingClpTester.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/GenotypeConcordanceGA4GHSchemeTest.java' -> `./src/test/java/picard/vcf/GenotypeConcordanceGA4GHSchemeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/GenotypeConcordanceGA4GHSchemeWithMissingTest.java' -> `./src/test/java/picard/vcf/GenotypeConcordanceGA4GHSchemeWithMissingTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/VcfFormatConverterTest.java' -> `./src/test/java/picard/vcf/VcfFormatConverterTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/processor/ThreadsafeTest.java' -> `./src/test/java/picard/vcf/processor/ThreadsafeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/processor/ByWholeContigTest.java' -> `./src/test/java/picard/vcf/processor/ByWholeContigTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/processor/VcfFileSegmentGeneratorTest.java' -> `./src/test/java/picard/vcf/processor/VcfFileSegmentGeneratorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/processor/WidthLimitingDecoratorTest.java' -> `./src/test/java/picard/vcf/processor/WidthLimitingDecoratorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/processor/AccumulatorExecutorTest.java' -> `./src/test/java/picard/vcf/processor/AccumulatorExecutorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/MendelianViolations/FindMendelianViolationsTest.java' -> `./src/test/java/picard/vcf/MendelianViolations/FindMendelianViolationsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/vcf/filter/TestFilterVcf.java' -> `./src/test/java/picard/vcf/filter/TestFilterVcf.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/BedToIntervalListTest.java' -> `./src/test/java/picard/util/BedToIntervalListTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/TabbedTextFileWithHeaderParserTest.java' -> `./src/test/java/picard/util/TabbedTextFileWithHeaderParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/IntervalListToBedTest.java' -> `./src/test/java/picard/util/IntervalListToBedTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/IlluminaUtilTest.java' -> `./src/test/java/picard/util/IlluminaUtilTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/FileChannelJDKBugWorkAroundTest.java' -> `./src/test/java/picard/util/FileChannelJDKBugWorkAroundTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/IntervalListScattererTest.java' -> `./src/test/java/picard/util/IntervalListScattererTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/MathUtilTest.java' -> `./src/test/java/picard/util/MathUtilTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/MergingIteratorTest.java' -> `./src/test/java/picard/util/MergingIteratorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/TextFileParsersTest.java' -> `./src/test/java/picard/util/TextFileParsersTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/UnsignedTypeUtilTest.java' -> `./src/test/java/picard/util/UnsignedTypeUtilTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/ScatterIntervalsByNsTest.java' -> `./src/test/java/picard/util/ScatterIntervalsByNsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/GraphUtilsTest.java' -> `./src/test/java/picard/util/GraphUtilsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/FifoBufferTest.java' -> `./src/test/java/picard/util/FifoBufferTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/QuerySortedReadPairIteratorUtilTest.java' -> `./src/test/java/picard/util/QuerySortedReadPairIteratorUtilTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/RExecutorTest.java' -> `./src/test/java/picard/util/RExecutorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/DelimitedTextFileWithHeaderIteratorTest.java' -> `./src/test/java/picard/util/DelimitedTextFileWithHeaderIteratorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/TestNGUtil.java' -> `./src/test/java/picard/util/TestNGUtil.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/util/ClippingUtilityTest.java' -> `./src/test/java/picard/util/ClippingUtilityTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/reference/NonNFastaSizeTest.java' -> `./src/test/java/picard/reference/NonNFastaSizeTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/pedigree/PedFileTest.java' -> `./src/test/java/picard/pedigree/PedFileTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/fingerprint/CrosscheckFingerprintsTest.java' -> `./src/test/java/picard/fingerprint/CrosscheckFingerprintsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/fingerprint/HaplotypeMapTest.java' -> `./src/test/java/picard/fingerprint/HaplotypeMapTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/fingerprint/HaplotypeProbabilityOfNormalGivenTumorTest.java' -> `./src/test/java/picard/fingerprint/HaplotypeProbabilityOfNormalGivenTumorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/fingerprint/FingerprintCheckerTest.java' -> `./src/test/java/picard/fingerprint/FingerprintCheckerTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/fingerprint/HaplotypeProbabilitiesTest.java' -> `./src/test/java/picard/fingerprint/HaplotypeProbabilitiesTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/metrics/CollectRrbsMetricsTest.java' -> `./src/test/java/picard/metrics/CollectRrbsMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/cmdline/PicardCommandLineTest.java' -> `./src/test/java/picard/cmdline/PicardCommandLineTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/cmdline/CommandLineParserTest.java' -> `./src/test/java/picard/cmdline/CommandLineParserTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/cmdline/CommandLineProgramTest.java' -> `./src/test/java/picard/cmdline/CommandLineProgramTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverageTest.java' -> `./src/test/java/picard/analysis/CollectWgsMetricsWithNonZeroCoverageTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectRnaSeqMetricsTest.java' -> `./src/test/java/picard/analysis/CollectRnaSeqMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectJumpingLibraryMetricsTest.java' -> `./src/test/java/picard/analysis/CollectJumpingLibraryMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectMultipleMetricsTest.java' -> `./src/test/java/picard/analysis/CollectMultipleMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectQualityYieldMetricsTest.java' -> `./src/test/java/picard/analysis/CollectQualityYieldMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectWgsMetricsTest.java' -> `./src/test/java/picard/analysis/CollectWgsMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/TheoreticalSensitivityTest.java' -> `./src/test/java/picard/analysis/TheoreticalSensitivityTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/MergeableMetricBaseTest.java' -> `./src/test/java/picard/analysis/MergeableMetricBaseTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CounterManagerTest.java' -> `./src/test/java/picard/analysis/CounterManagerTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectOxoGMetricsTest.java' -> `./src/test/java/picard/analysis/CollectOxoGMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectAlignmentSummaryMetricsTest.java' -> `./src/test/java/picard/analysis/CollectAlignmentSummaryMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/WgsMetricsProcessorImplTest.java' -> `./src/test/java/picard/analysis/WgsMetricsProcessorImplTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectGcBiasMetricsTest.java' -> `./src/test/java/picard/analysis/CollectGcBiasMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectInsertSizeMetricsTest.java' -> `./src/test/java/picard/analysis/CollectInsertSizeMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/FastWgsMetricsCollectorTest.java' -> `./src/test/java/picard/analysis/FastWgsMetricsCollectorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/WgsMetricsTest.java' -> `./src/test/java/picard/analysis/WgsMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/CollectWgsMetricsTestUtils.java' -> `./src/test/java/picard/analysis/CollectWgsMetricsTestUtils.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/MultiLevelCollectorTest.java' -> `./src/test/java/picard/analysis/MultiLevelCollectorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/AbstractWgsMetricsCollectorTest.java' -> `./src/test/java/picard/analysis/AbstractWgsMetricsCollectorTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/directed/CollectHsMetricsTest.java' -> `./src/test/java/picard/analysis/directed/CollectHsMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/directed/CollectTargetedMetricsTest.java' -> `./src/test/java/picard/analysis/directed/CollectTargetedMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/replicates/CollectIndependentReplicatesMetricTest.java' -> `./src/test/java/picard/analysis/replicates/CollectIndependentReplicatesMetricTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/analysis/artifacts/CollectSequencingArtifactMetricsTest.java' -> `./src/test/java/picard/analysis/artifacts/CollectSequencingArtifactMetricsTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/src/test/java/picard/fastq/BamToBfqTest.java' -> `./src/test/java/picard/fastq/BamToBfqTest.java' `/gnu/store/mnai1bjj3i010isrj82r9sw6i5w1k337-java-picard-2.10.3-checkout/project/plugins.sbt' -> `./project/plugins.sbt' phase `unpack' succeeded after 1.6 seconds starting phase `remove-useless-build.xml' phase `remove-useless-build.xml' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.1 seconds starting phase `patch-source-shebangs' patch-shebang: ./gradlew: changing `/usr/bin/env bash' to `/gnu/store/2an4h5ndc22dv62q3l985ciq862q4bj7-bash-minimal-5.1.8/bin/bash' patch-shebang: ./src/main/resources/picard/docker_helper.sh: changing `/usr/bin/env bash' to `/gnu/store/2an4h5ndc22dv62q3l985ciq862q4bj7-bash-minimal-5.1.8/bin/bash' patch-shebang: ./src/main/resources/release_picard.sh: changing `/bin/bash' to `/gnu/store/2an4h5ndc22dv62q3l985ciq862q4bj7-bash-minimal-5.1.8/bin/bash' phase `patch-source-shebangs' succeeded after 0.3 seconds starting phase `configure' phase `configure' succeeded after 0.1 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.2 seconds starting phase `edit-classpath-in-manifest' phase `edit-classpath-in-manifest' succeeded after 0.0 seconds starting phase `build' Buildfile: /tmp/guix-build-java-picard-2.10.3.drv-0/source/build.xml compile: [mkdir] Created dir: /tmp/guix-build-java-picard-2.10.3.drv-0/source/build/classes [javac] Compiling 534 source files to /tmp/guix-build-java-picard-2.10.3.drv-0/source/build/classes [javac] Note: Some input files use or override a deprecated API. [javac] Note: Recompile with -Xlint:deprecation for details. [javac] Note: Some input files use unchecked or unsafe operations. [javac] Note: Recompile with -Xlint:unchecked for details. manifest: [mkdir] Created dir: /tmp/guix-build-java-picard-2.10.3.drv-0/source/build/manifest jar: [mkdir] Created dir: /tmp/guix-build-java-picard-2.10.3.drv-0/source/build/jar [jar] Building jar: /tmp/guix-build-java-picard-2.10.3.drv-0/source/build/jar/picard.jar BUILD SUCCESSFUL Total time: 4 seconds phase `build' succeeded after 4.3 seconds starting phase `check' test suite not run phase `check' succeeded after 0.0 seconds starting phase `install' Buildfile: /tmp/guix-build-java-picard-2.10.3.drv-0/source/build.xml install: [copy] Copying 1 file to /gnu/store/1qn0n5zdfvvwp3n201r8vcbfyr84fqcn-java-picard-2.10.3/share/java BUILD SUCCESSFUL Total time: 0 seconds phase `install' succeeded after 0.4 seconds starting phase `reorder-jar-content' repacking /gnu/store/1qn0n5zdfvvwp3n201r8vcbfyr84fqcn-java-picard-2.10.3/share/java/picard.jar adding: META-INF/ (stored 0%) adding: META-INF/MANIFEST.MF (stored 0%) adding: picard/ (stored 0%) adding: picard/PicardException.class (stored 0%) adding: picard/Test.class (stored 0%) adding: picard/analysis/ (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollector.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest$1.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest$2.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest$3.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest$4.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest$5.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest.class (stored 0%) adding: picard/analysis/AdapterUtility.class (stored 0%) adding: picard/analysis/AlignmentSummaryMetrics$Category.class (stored 0%) adding: picard/analysis/AlignmentSummaryMetrics.class (stored 0%) adding: picard/analysis/AlignmentSummaryMetricsCollector$GroupAlignmentSummaryMetricsPerUnitMetricCollector$IndividualAlignmentSummaryMetricsCollector.class (stored 0%) adding: picard/analysis/AlignmentSummaryMetricsCollector$GroupAlignmentSummaryMetricsPerUnitMetricCollector.class (stored 0%) adding: picard/analysis/AlignmentSummaryMetricsCollector.class (stored 0%) adding: picard/analysis/BaseDistributionByCycleMetrics.class (stored 0%) adding: picard/analysis/ChimeraUtil.class (stored 0%) adding: picard/analysis/CollectAlignmentSummaryMetrics.class (stored 0%) adding: picard/analysis/CollectAlignmentSummaryMetricsTest$1.class (stored 0%) adding: picard/analysis/CollectAlignmentSummaryMetricsTest.class (stored 0%) adding: picard/analysis/CollectBaseDistributionByCycle$1.class (stored 0%) adding: picard/analysis/CollectBaseDistributionByCycle$HistogramGenerator.class (stored 0%) adding: picard/analysis/CollectBaseDistributionByCycle.class (stored 0%) adding: picard/analysis/CollectGcBiasMetrics.class (stored 0%) adding: picard/analysis/CollectGcBiasMetricsTest.class (stored 0%) adding: picard/analysis/CollectInsertSizeMetrics.class (stored 0%) adding: picard/analysis/CollectInsertSizeMetricsTest.class (stored 0%) adding: picard/analysis/CollectJumpingLibraryMetrics.class (stored 0%) adding: picard/analysis/CollectJumpingLibraryMetricsTest.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$1.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$1.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$2.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$3.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$4.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$5.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$6.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$7.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$8.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program$9.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$Program.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics$ProgramInterface.class (stored 0%) adding: picard/analysis/CollectMultipleMetrics.class (stored 0%) adding: picard/analysis/CollectMultipleMetricsTest$1.class (stored 0%) adding: picard/analysis/CollectMultipleMetricsTest.class (stored 0%) adding: picard/analysis/CollectOxoGMetrics$1.class (stored 0%) adding: picard/analysis/CollectOxoGMetrics$Calculator.class (stored 0%) adding: picard/analysis/CollectOxoGMetrics$Counts.class (stored 0%) adding: picard/analysis/CollectOxoGMetrics$CpcgMetrics.class (stored 0%) adding: picard/analysis/CollectOxoGMetrics.class (stored 0%) adding: picard/analysis/CollectOxoGMetricsTest.class (stored 0%) adding: picard/analysis/CollectQualityYieldMetrics$QualityYieldMetrics.class (stored 0%) adding: picard/analysis/CollectQualityYieldMetrics$QualityYieldMetricsCollector.class (stored 0%) adding: picard/analysis/CollectQualityYieldMetrics.class (stored 0%) adding: picard/analysis/CollectQualityYieldMetricsTest.class (stored 0%) adding: picard/analysis/CollectRawWgsMetrics$RawWgsMetrics.class (stored 0%) adding: picard/analysis/CollectRawWgsMetrics.class (stored 0%) adding: picard/analysis/CollectRnaSeqMetrics.class (stored 0%) adding: picard/analysis/CollectRnaSeqMetricsTest.class (stored 0%) adding: picard/analysis/CollectRrbsMetrics.class (stored 0%) adding: picard/analysis/CollectWgsMetrics$WgsMetrics.class (stored 0%) adding: picard/analysis/CollectWgsMetrics$WgsMetricsCollector.class (stored 0%) adding: picard/analysis/CollectWgsMetrics.class (stored 0%) adding: picard/analysis/CollectWgsMetricsTest.class (stored 0%) adding: picard/analysis/CollectWgsMetricsTestUtils$1.class (stored 0%) adding: picard/analysis/CollectWgsMetricsTestUtils.class (stored 0%) adding: picard/analysis/CollectWgsMetricsWithNonZeroCoverage$WgsMetricsWithNonZeroCoverage$Category.class (stored 0%) adding: picard/analysis/CollectWgsMetricsWithNonZeroCoverage$WgsMetricsWithNonZeroCoverage.class (stored 0%) adding: picard/analysis/CollectWgsMetricsWithNonZeroCoverage$WgsMetricsWithNonZeroCoverageCollector.class (stored 0%) adding: picard/analysis/CollectWgsMetricsWithNonZeroCoverage.class (stored 0%) adding: picard/analysis/CollectWgsMetricsWithNonZeroCoverageTest.class (stored 0%) adding: picard/analysis/CompareMetrics.class (stored 0%) adding: picard/analysis/CounterManager$1.class (stored 0%) adding: picard/analysis/CounterManager$Counter.class (stored 0%) adding: picard/analysis/CounterManager.class (stored 0%) adding: picard/analysis/CounterManagerTest.class (stored 0%) adding: picard/analysis/CpgLocation.class (stored 0%) adding: picard/analysis/FastWgsMetricsCollector.class (stored 0%) adding: picard/analysis/FastWgsMetricsCollectorTest.class (stored 0%) adding: picard/analysis/FingerprintingDetailMetrics.class (stored 0%) adding: picard/analysis/FingerprintingSummaryMetrics.class (stored 0%) adding: picard/analysis/GcBiasCollectorArgs.class (stored 0%) adding: picard/analysis/GcBiasDetailMetrics.class (stored 0%) adding: picard/analysis/GcBiasMetricsCollector$GcObject.class (stored 0%) adding: picard/analysis/GcBiasMetricsCollector$PerUnitGcBiasMetricsCollector.class (stored 0%) adding: picard/analysis/GcBiasMetricsCollector.class (stored 0%) adding: picard/analysis/GcBiasSummaryMetrics.class (stored 0%) adding: picard/analysis/GcBiasUtils$CalculateGcState.class (stored 0%) adding: picard/analysis/GcBiasUtils.class (stored 0%) adding: picard/analysis/InsertSizeMetrics.class (stored 0%) adding: picard/analysis/JumpingLibraryMetrics.class (stored 0%) adding: picard/analysis/MeanQualityByCycle$1.class (stored 0%) adding: picard/analysis/MeanQualityByCycle$HistogramGenerator.class (stored 0%) adding: picard/analysis/MeanQualityByCycle.class (stored 0%) adding: picard/analysis/MergeableMetricBase$MergeByAdding.class (stored 0%) adding: picard/analysis/MergeableMetricBase$MergeByAssertEquals.class (stored 0%) adding: picard/analysis/MergeableMetricBase$MergingIsManual.class (stored 0%) adding: picard/analysis/MergeableMetricBase$NoMergingIsDerived.class (stored 0%) adding: picard/analysis/MergeableMetricBase$NoMergingKeepsValue.class (stored 0%) adding: picard/analysis/MergeableMetricBase.class (stored 0%) adding: picard/analysis/MergeableMetricBaseTest$1.class (stored 0%) adding: picard/analysis/MergeableMetricBaseTest$TestDerivedMergableMetric.class (stored 0%) adding: picard/analysis/MergeableMetricBaseTest$TestMergeableMetric.class (stored 0%) adding: picard/analysis/MergeableMetricBaseTest$TestMergeableMetricIllegal.class (stored 0%) adding: picard/analysis/MergeableMetricBaseTest$TestMergeableMetricWithRestrictedMembers.class (stored 0%) adding: picard/analysis/MergeableMetricBaseTest.class (stored 0%) adding: picard/analysis/MetricAccumulationLevel.class (stored 0%) adding: picard/analysis/MultiLevelCollectorTest$RecordCountMultiLevelCollector$RecordCountPerUnitCollector.class (stored 0%) adding: picard/analysis/MultiLevelCollectorTest$RecordCountMultiLevelCollector.class (stored 0%) adding: picard/analysis/MultiLevelCollectorTest$TestArg.class (stored 0%) adding: picard/analysis/MultiLevelCollectorTest$TotalNumberMetric.class (stored 0%) adding: picard/analysis/MultiLevelCollectorTest.class (stored 0%) adding: picard/analysis/QualityScoreDistribution.class (stored 0%) adding: picard/analysis/RnaSeqMetrics.class (stored 0%) adding: picard/analysis/RrbsCpgDetailMetrics.class (stored 0%) adding: picard/analysis/RrbsMetrics.class (stored 0%) adding: picard/analysis/RrbsMetricsCollector$PerUnitRrbsMetricsCollector.class (stored 0%) adding: picard/analysis/RrbsMetricsCollector.class (stored 0%) adding: picard/analysis/RrbsSummaryMetrics.class (stored 0%) adding: 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picard/illumina/parser/fakers/BclFileFakerTest.class (stored 0%) adding: picard/illumina/parser/fakers/ClocsFileFaker.class (stored 0%) adding: picard/illumina/parser/fakers/FileFaker.class (stored 0%) adding: picard/illumina/parser/fakers/FilterFileFaker.class (stored 0%) adding: picard/illumina/parser/fakers/LocsFileFaker.class (stored 0%) adding: picard/illumina/parser/fakers/MultiTileBclFileFaker.class (stored 0%) adding: picard/illumina/parser/fakers/MultiTileLocsFileFaker.class (stored 0%) adding: picard/illumina/parser/fakers/PosFileFaker.class (stored 0%) adding: picard/illumina/parser/readers/ (stored 0%) adding: picard/illumina/parser/readers/AbstractIlluminaPositionFileReader$PositionInfo.class (stored 0%) adding: picard/illumina/parser/readers/AbstractIlluminaPositionFileReader.class (stored 0%) adding: picard/illumina/parser/readers/AbstractIlluminaPositionFileReaderTest$MockPositionFileReader.class (stored 0%) adding: picard/illumina/parser/readers/AbstractIlluminaPositionFileReaderTest.class (stored 0%) adding: picard/illumina/parser/readers/BarcodeFileReader.class (stored 0%) adding: picard/illumina/parser/readers/BaseBclReader$CycleData.class (stored 0%) adding: picard/illumina/parser/readers/BaseBclReader$TileData.class (stored 0%) adding: picard/illumina/parser/readers/BaseBclReader.class (stored 0%) adding: picard/illumina/parser/readers/BclIndexReader.class (stored 0%) adding: picard/illumina/parser/readers/BclQualityEvaluationStrategy$1.class (stored 0%) adding: picard/illumina/parser/readers/BclQualityEvaluationStrategy.class (stored 0%) adding: picard/illumina/parser/readers/BclReader.class (stored 0%) adding: picard/illumina/parser/readers/BclReaderTest$1.class (stored 0%) adding: picard/illumina/parser/readers/BclReaderTest$2.class (stored 0%) adding: picard/illumina/parser/readers/BclReaderTest.class (stored 0%) adding: picard/illumina/parser/readers/BinaryFileIterator.class (stored 0%) 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adding: picard/vcf/processor/VcfFileSegmentGeneratorTest.class (stored 0%) adding: picard/vcf/processor/WidthLimitingDecoratorTest$1.class (stored 0%) adding: picard/vcf/processor/WidthLimitingDecoratorTest$Segment.class (stored 0%) adding: picard/vcf/processor/WidthLimitingDecoratorTest.class (stored 0%) adding: picard/vcf/processor/util/ (stored 0%) adding: picard/vcf/processor/util/PredicateFilterDecoratingClosableIterator.class (stored 0%) phase `reorder-jar-content' succeeded after 0.2 seconds starting phase `strip-jar-timestamps' repacking /gnu/store/1qn0n5zdfvvwp3n201r8vcbfyr84fqcn-java-picard-2.10.3/share/java/picard.jar adding: META-INF/ (stored 0%) adding: META-INF/MANIFEST.MF (stored 0%) adding: picard/ (stored 0%) adding: picard/PicardException.class (stored 0%) adding: picard/Test.class (stored 0%) adding: picard/analysis/ (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollector.class (stored 0%) adding: picard/analysis/AbstractWgsMetricsCollectorTest$1.class 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picard/illumina/parser/readers/BclIndexReader.class (stored 0%) adding: picard/illumina/parser/readers/BclQualityEvaluationStrategy$1.class (stored 0%) adding: picard/illumina/parser/readers/BclQualityEvaluationStrategy.class (stored 0%) adding: picard/illumina/parser/readers/BclReader.class (stored 0%) adding: picard/illumina/parser/readers/BclReaderTest$1.class (stored 0%) adding: picard/illumina/parser/readers/BclReaderTest$2.class (stored 0%) adding: picard/illumina/parser/readers/BclReaderTest.class (stored 0%) adding: picard/illumina/parser/readers/BinaryFileIterator.class (stored 0%) adding: picard/illumina/parser/readers/CbclReader.class (stored 0%) adding: picard/illumina/parser/readers/CbclReaderTest.class (stored 0%) adding: picard/illumina/parser/readers/ClocsFileReader.class (stored 0%) adding: picard/illumina/parser/readers/ClocsFileReaderTest.class (stored 0%) adding: picard/illumina/parser/readers/EmpiricalPhasingMetricsOutReader$IlluminaPhasingMetrics.class (stored 0%) 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picard/illumina/parser/readers/MMapBackedIteratorFactory$MMapBackedIterator.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactory.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$1$1.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$1.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$2$1.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$2.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$3$1.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$3.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$FileTestDef.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest$NoHeaderTestIter.class (stored 0%) adding: picard/illumina/parser/readers/MMapBackedIteratorFactoryTest.class (stored 0%) adding: picard/illumina/parser/readers/PosFileReader.class (stored 0%) adding: picard/illumina/parser/readers/PosFileReaderTest.class (stored 0%) adding: picard/illumina/parser/readers/TileMetricsOutReader$IlluminaLaneTileCode.class (stored 0%) adding: picard/illumina/parser/readers/TileMetricsOutReader$IlluminaTileMetrics.class (stored 0%) adding: picard/illumina/parser/readers/TileMetricsOutReader$TileMetricsVersion.class (stored 0%) adding: picard/illumina/parser/readers/TileMetricsOutReader.class (stored 0%) adding: picard/illumina/quality/ (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics$1.class (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics$PFFailDetailedMetric.class (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics$PFFailSummaryMetric.class (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics$PerTilePFMetricsExtractor.class (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics$ReadClassifier$PfFailReason.class (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics$ReadClassifier.class (stored 0%) adding: picard/illumina/quality/CollectHiSeqXPfFailMetrics.class (stored 0%) adding: picard/metrics/ (stored 0%) adding: picard/metrics/CollectRrbsMetricsTest.class (stored 0%) adding: picard/metrics/GcBiasMetrics.class (stored 0%) adding: picard/metrics/MultiLevelCollector$AllReadsDistributor.class (stored 0%) adding: picard/metrics/MultiLevelCollector$Distributor.class (stored 0%) adding: picard/metrics/MultiLevelCollector$LibraryDistributor.class (stored 0%) adding: picard/metrics/MultiLevelCollector$ReadGroupCollector.class (stored 0%) adding: picard/metrics/MultiLevelCollector$SampleDistributor.class (stored 0%) adding: picard/metrics/MultiLevelCollector.class (stored 0%) adding: picard/metrics/MultilevelMetrics.class (stored 0%) adding: picard/metrics/PerUnitMetricCollector.class (stored 0%) 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picard/sam/CompareSAMs.class (stored 0%) adding: picard/sam/CompareSAMsTest.class (stored 0%) adding: picard/sam/CreateSequenceDictionary$1.class (stored 0%) adding: picard/sam/CreateSequenceDictionary$StringCodec.class (stored 0%) adding: picard/sam/CreateSequenceDictionary.class (stored 0%) adding: picard/sam/CreateSequenceDictionaryTest.class (stored 0%) adding: picard/sam/DownsampleSam.class (stored 0%) adding: picard/sam/DuplicationMetrics.class (stored 0%) adding: picard/sam/DuplicationMetricsTest.class (stored 0%) adding: picard/sam/EarliestFragmentPrimaryAlignmentSelectionStrategy.class (stored 0%) adding: picard/sam/FastqToSam$1.class (stored 0%) adding: picard/sam/FastqToSam.class (stored 0%) adding: picard/sam/FastqToSamTest.class (stored 0%) adding: picard/sam/FilterSamReads$1.class (stored 0%) adding: picard/sam/FilterSamReads$Filter.class (stored 0%) adding: picard/sam/FilterSamReads.class (stored 0%) adding: picard/sam/FilterSamReadsTest.class (stored 0%) adding: picard/sam/FixMateInformation$1.class (stored 0%) adding: picard/sam/FixMateInformation.class (stored 0%) adding: picard/sam/FixMateInformationTest.class (stored 0%) adding: picard/sam/GatherBamFiles.class (stored 0%) adding: picard/sam/GatherBamFilesTest.class (stored 0%) adding: picard/sam/HitsForInsert$1.class (stored 0%) adding: picard/sam/HitsForInsert$HitIndexComparator.class (stored 0%) adding: picard/sam/HitsForInsert$NumPrimaryAlignmentState.class (stored 0%) adding: picard/sam/HitsForInsert.class (stored 0%) adding: picard/sam/MergeBamAlignment$PrimaryAlignmentStrategy.class (stored 0%) adding: picard/sam/MergeBamAlignment.class (stored 0%) adding: picard/sam/MergeBamAlignmentTest$1.class (stored 0%) adding: picard/sam/MergeBamAlignmentTest$AlignmentAccumulator.class (stored 0%) adding: picard/sam/MergeBamAlignmentTest$HitSpec.class (stored 0%) adding: picard/sam/MergeBamAlignmentTest$MostDistantStrategyAlignmentSpec.class (stored 0%) adding: picard/sam/MergeBamAlignmentTest$MultipleAlignmentSpec.class (stored 0%) adding: picard/sam/MergeBamAlignmentTest.class (stored 0%) adding: picard/sam/MergeSamFiles.class (stored 0%) adding: picard/sam/MergeSamFilesTest.class (stored 0%) adding: picard/sam/MostDistantPrimaryAlignmentSelectionStrategy$1.class (stored 0%) adding: picard/sam/MostDistantPrimaryAlignmentSelectionStrategy$BestEndAlignmentsAccumulator.class (stored 0%) adding: picard/sam/MostDistantPrimaryAlignmentSelectionStrategy$BestPairAlignmentsAccumulator.class (stored 0%) adding: picard/sam/MostDistantPrimaryAlignmentSelectionStrategy.class (stored 0%) adding: picard/sam/MultiHitAlignedReadIterator$1.class (stored 0%) adding: picard/sam/MultiHitAlignedReadIterator.class (stored 0%) adding: picard/sam/PositionBasedDownsampleSam$1.class (stored 0%) adding: picard/sam/PositionBasedDownsampleSam$CircleSelector.class (stored 0%) adding: picard/sam/PositionBasedDownsampleSam$Coord.class (stored 0%) adding: picard/sam/PositionBasedDownsampleSam.class (stored 0%) adding: picard/sam/PositionBasedDownsampleSamTest.class (stored 0%) adding: picard/sam/PrimaryAlignmentSelectionStrategy.class (stored 0%) adding: picard/sam/ReorderSam.class (stored 0%) adding: picard/sam/ReplaceSamHeader.class (stored 0%) adding: picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar$CanSkipSamFile.class (stored 0%) adding: picard/sam/RevertOriginalBaseQualitiesAndAddMateCigar.class (stored 0%) adding: picard/sam/RevertSam$1.class (stored 0%) adding: picard/sam/RevertSam$2.class (stored 0%) adding: picard/sam/RevertSam$FileType.class (stored 0%) adding: picard/sam/RevertSam$RevertSamSorter.class (stored 0%) adding: picard/sam/RevertSam$RevertSamWriter.class (stored 0%) adding: picard/sam/RevertSam$ValidationUtil.class (stored 0%) adding: picard/sam/RevertSam.class (stored 0%) adding: picard/sam/RevertSamTest.class (stored 0%) adding: picard/sam/SamAlignmentMerger$1.class (stored 0%) adding: picard/sam/SamAlignmentMerger$SeparateEndAlignmentIterator.class (stored 0%) adding: picard/sam/SamAlignmentMerger$SuffixTrimingSamRecordIterator.class (stored 0%) adding: picard/sam/SamAlignmentMerger.class (stored 0%) adding: picard/sam/SamFileConverterTest.class (stored 0%) adding: picard/sam/SamFormatConverter.class (stored 0%) adding: picard/sam/SamToFastq$1.class (stored 0%) adding: picard/sam/SamToFastq$FastqWriters.class (stored 0%) adding: picard/sam/SamToFastq.class (stored 0%) adding: picard/sam/SamToFastqTest$MatePair.class (stored 0%) adding: picard/sam/SamToFastqTest.class (stored 0%) adding: picard/sam/SetNmAndUqTags.class (stored 0%) adding: picard/sam/SetNmMdAndUqTags.class (stored 0%) adding: picard/sam/SetNmMdAndUqTagsTest.class (stored 0%) adding: picard/sam/SortSam.class (stored 0%) adding: picard/sam/SplitSamByLibrary.class (stored 0%) adding: picard/sam/SplitSamByLibraryTest.class (stored 0%) adding: picard/sam/ValidateSamFile$1.class (stored 0%) adding: 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picard/util/FifoBuffer$3.class (stored 0%) adding: picard/util/FifoBuffer$LoggingExceptionHandler.class (stored 0%) adding: picard/util/FifoBuffer.class (stored 0%) adding: picard/util/FifoBufferTest.class (stored 0%) adding: picard/util/FileChannelJDKBugWorkAround.class (stored 0%) adding: picard/util/FileChannelJDKBugWorkAroundTest.class (stored 0%) adding: picard/util/GraphUtils$Graph.class (stored 0%) adding: picard/util/GraphUtils.class (stored 0%) adding: picard/util/GraphUtilsTest.class (stored 0%) adding: picard/util/IlluminaUtil$IlluminaAdapterPair.class (stored 0%) adding: picard/util/IlluminaUtil.class (stored 0%) adding: picard/util/IlluminaUtilTest.class (stored 0%) adding: picard/util/IntervalListScatterer$1.class (stored 0%) adding: picard/util/IntervalListScatterer$2.class (stored 0%) adding: picard/util/IntervalListScatterer$Mode.class (stored 0%) adding: picard/util/IntervalListScatterer.class (stored 0%) adding: picard/util/IntervalListScattererTest$1.class (stored 0%) adding: picard/util/IntervalListScattererTest$Testcase.class (stored 0%) adding: picard/util/IntervalListScattererTest.class (stored 0%) adding: picard/util/IntervalListToBed.class (stored 0%) adding: picard/util/IntervalListToBedTest.class (stored 0%) adding: picard/util/IntervalListTools$1.class (stored 0%) adding: picard/util/IntervalListTools$Action$1.class (stored 0%) adding: picard/util/IntervalListTools$Action$2.class (stored 0%) adding: picard/util/IntervalListTools$Action$3.class (stored 0%) adding: picard/util/IntervalListTools$Action$4.class (stored 0%) adding: picard/util/IntervalListTools$Action$5.class (stored 0%) adding: picard/util/IntervalListTools$Action$6.class (stored 0%) adding: picard/util/IntervalListTools$Action.class (stored 0%) adding: picard/util/IntervalListTools$TYPE$1.class (stored 0%) adding: picard/util/IntervalListTools$TYPE$2.class (stored 0%) adding: picard/util/IntervalListTools$TYPE.class (stored 0%) adding: picard/util/IntervalListTools.class (stored 0%) adding: picard/util/Iterators$1.class (stored 0%) adding: picard/util/Iterators.class (stored 0%) adding: picard/util/LiftOverIntervalList.class (stored 0%) adding: picard/util/MathUtil$1.class (stored 0%) adding: picard/util/MathUtil$2.class (stored 0%) adding: picard/util/MathUtil$LogMath.class (stored 0%) adding: picard/util/MathUtil.class (stored 0%) adding: picard/util/MathUtilTest.class (stored 0%) adding: picard/util/MergingIteratorTest$1.class (stored 0%) adding: picard/util/MergingIteratorTest$QueueBackedIterator.class (stored 0%) adding: picard/util/MergingIteratorTest.class (stored 0%) adding: picard/util/MetricsDoclet.class (stored 0%) adding: picard/util/QuerySortedReadPairIteratorUtil$ReadPair.class (stored 0%) adding: picard/util/QuerySortedReadPairIteratorUtil.class (stored 0%) adding: picard/util/QuerySortedReadPairIteratorUtilTest.class (stored 0%) adding: picard/util/RExecutor.class (stored 0%) adding: picard/util/RExecutorTest.class (stored 0%) adding: picard/util/ReflectionUtil.class (stored 0%) adding: picard/util/ScatterIntervalsByNs$OutputType.class (stored 0%) adding: picard/util/ScatterIntervalsByNs.class (stored 0%) adding: picard/util/ScatterIntervalsByNsTest$1.class (stored 0%) adding: picard/util/ScatterIntervalsByNsTest.class (stored 0%) adding: picard/util/TabbedInputParser.class (stored 0%) adding: picard/util/TabbedTextFileWithHeaderParser$Row.class (stored 0%) adding: picard/util/TabbedTextFileWithHeaderParser$TheIterator.class (stored 0%) adding: picard/util/TabbedTextFileWithHeaderParser.class (stored 0%) adding: picard/util/TabbedTextFileWithHeaderParserTest.class (stored 0%) adding: picard/util/TestNGUtil$SingleTestUnitTest.class (stored 0%) adding: picard/util/TestNGUtil$TestNGParameterizable.class (stored 0%) adding: picard/util/TestNGUtil.class (stored 0%) adding: picard/util/TextFileParsersTest$WordCountTestParser.class (stored 0%) adding: picard/util/TextFileParsersTest.class (stored 0%) adding: picard/util/ThreadPoolExecutorWithExceptions.class (stored 0%) adding: picard/util/UnsignedTypeUtil.class (stored 0%) adding: picard/util/UnsignedTypeUtilTest.class (stored 0%) adding: picard/util/VariantType.class (stored 0%) adding: picard/vcf/ (stored 0%) adding: picard/vcf/AbstractVcfMergingClpTester.class (stored 0%) adding: picard/vcf/AccumulateVariantCallingMetrics.class (stored 0%) adding: picard/vcf/AccumulateVariantCallingMetricsTest.class (stored 0%) adding: picard/vcf/ByIntervalListVariantContextIterator.class (stored 0%) adding: picard/vcf/ByIntervalListVariantContextIteratorTest.class (stored 0%) adding: picard/vcf/CallingMetricAccumulator$Result.class (stored 0%) adding: picard/vcf/CallingMetricAccumulator.class (stored 0%) adding: picard/vcf/CallingMetricAccumulatorTest.class (stored 0%) adding: picard/vcf/CollectVariantCallingMetrics$VariantCallingDetailMetrics.class (stored 0%) adding: picard/vcf/CollectVariantCallingMetrics$VariantCallingSummaryMetrics.class (stored 0%) adding: picard/vcf/CollectVariantCallingMetrics.class (stored 0%) adding: picard/vcf/CollectVariantCallingMetricsTest.class (stored 0%) adding: picard/vcf/FixVcfHeader.class (stored 0%) adding: picard/vcf/FixVcfHeaderTest.class (stored 0%) adding: picard/vcf/GA4GHScheme.class (stored 0%) adding: picard/vcf/GA4GHSchemeWithMissingAsHomRef.class (stored 0%) adding: picard/vcf/GatherVcfs.class (stored 0%) adding: picard/vcf/GenotypeConcordance$Alleles.class (stored 0%) adding: picard/vcf/GenotypeConcordance.class (stored 0%) adding: picard/vcf/GenotypeConcordanceContingencyMetrics.class (stored 0%) adding: picard/vcf/GenotypeConcordanceCounts.class (stored 0%) adding: picard/vcf/GenotypeConcordanceDetailMetrics.class (stored 0%) adding: picard/vcf/GenotypeConcordanceGA4GHSchemeTest.class (stored 0%) adding: picard/vcf/GenotypeConcordanceGA4GHSchemeWithMissingTest.class (stored 0%) adding: picard/vcf/GenotypeConcordanceScheme.class (stored 0%) adding: picard/vcf/GenotypeConcordanceSchemeFactory.class (stored 0%) adding: picard/vcf/GenotypeConcordanceStateCodes.class (stored 0%) adding: picard/vcf/GenotypeConcordanceStates$CallState.class (stored 0%) adding: picard/vcf/GenotypeConcordanceStates$ContingencyState.class (stored 0%) adding: picard/vcf/GenotypeConcordanceStates$TruthAndCallStates.class (stored 0%) adding: picard/vcf/GenotypeConcordanceStates$TruthState.class (stored 0%) adding: picard/vcf/GenotypeConcordanceStates.class (stored 0%) adding: picard/vcf/GenotypeConcordanceSummaryMetrics.class (stored 0%) adding: picard/vcf/GenotypeConcordanceTest.class (stored 0%) adding: picard/vcf/GvcfMetricAccumulator.class (stored 0%) adding: picard/vcf/LiftoverVcf.class (stored 0%) adding: picard/vcf/LiftoverVcfTest.class (stored 0%) adding: picard/vcf/MakeSitesOnlyVcf.class (stored 0%) adding: picard/vcf/MendelianViolations/ (stored 0%) adding: picard/vcf/MendelianViolations/FindMendelianViolations.class (stored 0%) adding: picard/vcf/MendelianViolations/FindMendelianViolationsTest.class (stored 0%) adding: picard/vcf/MendelianViolations/MendelianViolationDetector$MendelianViolation.class (stored 0%) adding: picard/vcf/MendelianViolations/MendelianViolationDetector$Result.class (stored 0%) adding: picard/vcf/MendelianViolations/MendelianViolationDetector.class (stored 0%) adding: picard/vcf/MendelianViolations/MendelianViolationMetrics.class (stored 0%) adding: picard/vcf/MendelianViolations/MendelianViolationsByFamily.class (stored 0%) adding: picard/vcf/MergeVcfs.class (stored 0%) adding: picard/vcf/MergeVcfsTest.class (stored 0%) adding: picard/vcf/OrderedSet.class (stored 0%) adding: picard/vcf/PairedVariantSubContextIterator$VcfTuple.class (stored 0%) adding: picard/vcf/PairedVariantSubContextIterator.class (stored 0%) adding: picard/vcf/RenameSampleInVcf.class (stored 0%) adding: picard/vcf/SamTestUtils.class (stored 0%) adding: picard/vcf/SortVcf.class (stored 0%) adding: picard/vcf/SortVcfsTest.class (stored 0%) adding: picard/vcf/SplitVcfs.class (stored 0%) adding: picard/vcf/SplitVcfsTest.class (stored 0%) adding: picard/vcf/UpdateVcfSequenceDictionary.class (stored 0%) adding: picard/vcf/UpdateVcfSequenceDictionaryTest.class (stored 0%) adding: picard/vcf/VariantContextComparatorTest.class (stored 0%) adding: picard/vcf/VcfFormatConverter.class (stored 0%) adding: picard/vcf/VcfFormatConverterTest.class (stored 0%) adding: picard/vcf/VcfTestUtils.class (stored 0%) adding: picard/vcf/VcfToIntervalList.class (stored 0%) adding: picard/vcf/VcfUtils.class (stored 0%) adding: picard/vcf/filter/ (stored 0%) adding: picard/vcf/filter/AlleleBalanceFilter$1.class (stored 0%) adding: picard/vcf/filter/AlleleBalanceFilter$Counts.class (stored 0%) adding: picard/vcf/filter/AlleleBalanceFilter.class (stored 0%) adding: picard/vcf/filter/DepthFilter.class (stored 0%) adding: picard/vcf/filter/FilterApplyingVariantIterator.class (stored 0%) adding: picard/vcf/filter/FilterVcf$1.class (stored 0%) adding: picard/vcf/filter/FilterVcf$VariantContextJavascriptFilter.class (stored 0%) adding: picard/vcf/filter/FilterVcf.class (stored 0%) adding: picard/vcf/filter/FisherStrandFilter.class (stored 0%) adding: picard/vcf/filter/GenotypeFilter.class (stored 0%) adding: picard/vcf/filter/GenotypeQualityFilter.class (stored 0%) adding: picard/vcf/filter/QdFilter.class (stored 0%) adding: picard/vcf/filter/TestFilterVcf.class (stored 0%) adding: picard/vcf/filter/VariantFilter.class (stored 0%) adding: picard/vcf/processor/ (stored 0%) adding: picard/vcf/processor/AccumulatorExecutorTest$1$1.class (stored 0%) adding: picard/vcf/processor/AccumulatorExecutorTest$1.class (stored 0%) adding: picard/vcf/processor/AccumulatorExecutorTest.class (stored 0%) adding: picard/vcf/processor/ByWholeContigTest.class (stored 0%) adding: picard/vcf/processor/ThreadsafeTest.class (stored 0%) adding: picard/vcf/processor/VariantAccumulatorExecutor$MultiThreadedChunkBased$MultiException$1.class (stored 0%) adding: picard/vcf/processor/VariantAccumulatorExecutor$MultiThreadedChunkBased$MultiException.class (stored 0%) adding: picard/vcf/processor/VariantAccumulatorExecutor$MultiThreadedChunkBased$Worker.class (stored 0%) adding: picard/vcf/processor/VariantAccumulatorExecutor$MultiThreadedChunkBased.class (stored 0%) adding: picard/vcf/processor/VariantAccumulatorExecutor.class (stored 0%) adding: picard/vcf/processor/VariantIteratorProducer$Threadsafe$1.class (stored 0%) adding: picard/vcf/processor/VariantIteratorProducer$Threadsafe$NonUniqueVariantPredicate.class (stored 0%) adding: picard/vcf/processor/VariantIteratorProducer$Threadsafe$OverlapsPredicate.class (stored 0%) adding: picard/vcf/processor/VariantIteratorProducer$Threadsafe.class (stored 0%) adding: picard/vcf/processor/VariantIteratorProducer.class (stored 0%) adding: picard/vcf/processor/VariantProcessor$Accumulator.class (stored 0%) adding: picard/vcf/processor/VariantProcessor$AccumulatorGenerator.class (stored 0%) adding: picard/vcf/processor/VariantProcessor$Builder.class (stored 0%) adding: picard/vcf/processor/VariantProcessor$ResultMerger.class (stored 0%) adding: picard/vcf/processor/VariantProcessor.class (stored 0%) adding: picard/vcf/processor/VcfFileSegment$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegment$SequenceSizedChunk.class (stored 0%) adding: picard/vcf/processor/VcfFileSegment.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$1$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$ByWholeContig$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$ByWholeContig.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$WidthLimitingDecorator$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$WidthLimitingDecorator$VcfFileSegmentSubdivider$1$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$WidthLimitingDecorator$VcfFileSegmentSubdivider$1.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$WidthLimitingDecorator$VcfFileSegmentSubdivider.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator$WidthLimitingDecorator.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGenerator.class (stored 0%) adding: picard/vcf/processor/VcfFileSegmentGeneratorTest.class (stored 0%) adding: picard/vcf/processor/WidthLimitingDecoratorTest$1.class (stored 0%) adding: picard/vcf/processor/WidthLimitingDecoratorTest$Segment.class (stored 0%) adding: picard/vcf/processor/WidthLimitingDecoratorTest.class (stored 0%) adding: picard/vcf/processor/util/ (stored 0%) adding: picard/vcf/processor/util/PredicateFilterDecoratingClosableIterator.class (stored 0%) phase `strip-jar-timestamps' succeeded after 0.2 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `make-dynamic-linker-cache' phase `make-dynamic-linker-cache' succeeded after 0.0 seconds starting phase `install-license-files' installing 1 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds