starting phase `set-SOURCE-DATE-EPOCH'
phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds
starting phase `set-paths'
environment variable `PATH' set to `/gnu/store/7vfcp65x5ys1a3jal9qys1davs2zk9rs-cmake-minimal-3.21.4/bin:/gnu/store/k1y6sh0xh045v8jdhkpjl4p9ml6z5ap7-doxygen-1.9.1/bin:/gnu/store/jaalpl5m5a8cpidv3j96yfrrzal0hpqz-graphviz-2.49.0/bin:/gnu/store/rj1ani0k1dv6y4fcd2wbkp34rlqy587f-pkg-config-0.29.2/bin:/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin:/gnu/store/p53rihy4z18p8gwhjp5aad2vdqfsvwr7-python-pygments-2.8.1/bin:/gnu/store/1fi0zgxjv50r4p799zb2jf5ympn29kdf-python-sphinx-4.2.0/bin:/gnu/store/pvymz0z2mccih5rbf40fn49928b89zr6-fftwf-3.3.8/bin:/gnu/store/yd77q2zbdch5cis3xg1ajsb6g5wmlwyr-openblas-0.3.18/bin:/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/bin:/gnu/store/6s3mkll9wvgxgkczsjcl9nfqm74wi0mj-tar-1.34/bin:/gnu/store/6rxsi5nqx8dsmvx2ypyz81gb1n4csy3g-gzip-1.10/bin:/gnu/store/iipgssk08gmmkwxv5iyv1lm3blilvdir-bzip2-1.0.8/bin:/gnu/store/11gnzwa2qbqlg4pziysdk2fkbhrhhwrc-xz-5.2.5/bin:/gnu/store/6s9hy00b522g268spk3qasd8j8mg5z7r-file-5.39/bin:/gnu/store/b4s2gz0dyjhsym9rczyg21y909s2yzd1-diffutils-3.8/bin:/gnu/store/q89awzgsj00y74bmqlb4gl6b0plwi0k6-patch-2.7.6/bin:/gnu/store/bgmbk0abkm6nngmgam84fmb6m38kbndi-findutils-4.8.0/bin:/gnu/store/7mfpmrswg4y7apk0hri9hiwgn6xbbh9q-gawk-5.1.0/bin:/gnu/store/fkncn0815qj7k11zj05hyz670gdnb3jv-sed-4.8/bin:/gnu/store/14c1lz6vp2wqs6gh7m48rw3klx6bkvm8-grep-3.6/bin:/gnu/store/yixhh3q2i1x8pqpfq9nz83p15svg698m-coreutils-8.32/bin:/gnu/store/zz2br0lgdw6j6x6yvd0x49775gwn3bry-make-4.3/bin:/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin:/gnu/store/0mdldh4ih1ff6d7lfya0d62d9vd5d5m8-ld-wrapper-0/bin:/gnu/store/xnxxwmcdv1fl14y9a7c9bkxx8r0rza1j-binutils-2.37/bin:/gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/bin:/gnu/store/bgw8ciirrbpxbds3v9wklf1isysqjlsl-glibc-2.33/bin:/gnu/store/bgw8ciirrbpxbds3v9wklf1isysqjlsl-glibc-2.33/sbin:/gnu/store/77gljavy85dklky861ppixf3l93kzihl-python-docutils-0.17.1/bin:/gnu/store/hf1cy3a3aib7br8bykr1gng0rxbsi6y6-python-babel-2.9.0/bin:/gnu/store/canznnsg7232z91zz2cms8cxd2xh1h8f-python-charset-normalizer-2.0.5/bin:/gnu/store/rkdjp0f6mwj1sbvpcwgs91ifr0gz68m9-python-chardet-3.0.4/bin'
environment variable `CMAKE_PREFIX_PATH' set to `/gnu/store/7vfcp65x5ys1a3jal9qys1davs2zk9rs-cmake-minimal-3.21.4/:/gnu/store/k1y6sh0xh045v8jdhkpjl4p9ml6z5ap7-doxygen-1.9.1/:/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/:/gnu/store/jaalpl5m5a8cpidv3j96yfrrzal0hpqz-graphviz-2.49.0/:/gnu/store/rj1ani0k1dv6y4fcd2wbkp34rlqy587f-pkg-config-0.29.2/:/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/:/gnu/store/p53rihy4z18p8gwhjp5aad2vdqfsvwr7-python-pygments-2.8.1/:/gnu/store/1fi0zgxjv50r4p799zb2jf5ympn29kdf-python-sphinx-4.2.0/:/gnu/store/pvymz0z2mccih5rbf40fn49928b89zr6-fftwf-3.3.8/:/gnu/store/m022qas3nfacivw2xsw8blfsw029vp6z-hwloc-2.7.1-lib/:/gnu/store/5bwhad5kj2bfrfw9663433c1gmgx78gm-lmfit-8.2.2/:/gnu/store/yd77q2zbdch5cis3xg1ajsb6g5wmlwyr-openblas-0.3.18/:/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/:/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0/:/gnu/store/8mx483xb6b6xjdmyd9hax1aywfs6v42w-tng-1.8.2/:/gnu/store/6s3mkll9wvgxgkczsjcl9nfqm74wi0mj-tar-1.34/:/gnu/store/6rxsi5nqx8dsmvx2ypyz81gb1n4csy3g-gzip-1.10/:/gnu/store/iipgssk08gmmkwxv5iyv1lm3blilvdir-bzip2-1.0.8/:/gnu/store/11gnzwa2qbqlg4pziysdk2fkbhrhhwrc-xz-5.2.5/:/gnu/store/6s9hy00b522g268spk3qasd8j8mg5z7r-file-5.39/:/gnu/store/b4s2gz0dyjhsym9rczyg21y909s2yzd1-diffutils-3.8/:/gnu/store/q89awzgsj00y74bmqlb4gl6b0plwi0k6-patch-2.7.6/:/gnu/store/bgmbk0abkm6nngmgam84fmb6m38kbndi-findutils-4.8.0/:/gnu/store/7mfpmrswg4y7apk0hri9hiwgn6xbbh9q-gawk-5.1.0/:/gnu/store/fkncn0815qj7k11zj05hyz670gdnb3jv-sed-4.8/:/gnu/store/14c1lz6vp2wqs6gh7m48rw3klx6bkvm8-grep-3.6/:/gnu/store/yixhh3q2i1x8pqpfq9nz83p15svg698m-coreutils-8.32/:/gnu/store/zz2br0lgdw6j6x6yvd0x49775gwn3bry-make-4.3/:/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/:/gnu/store/0mdldh4ih1ff6d7lfya0d62d9vd5d5m8-ld-wrapper-0/:/gnu/store/xnxxwmcdv1fl14y9a7c9bkxx8r0rza1j-binutils-2.37/:/gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/:/gnu/store/bgw8ciirrbpxbds3v9wklf1isysqjlsl-glibc-2.33/:/gnu/store/1xfiv21xwzqf3j56phh8j2lg227391y5-glibc-2.33-static/:/gnu/store/w34424h2ihfqfxn72aj08h8z5rjvfk0r-glibc-utf8-locales-2.33/:/gnu/store/dqs4rd8vhxfqz9d6yisgsw9r31iljdbm-python-sphinxcontrib-serializinghtml-1.1.5/:/gnu/store/z7snazkia23h058k2l6yaa91zv56s7yj-python-sphinxcontrib-qthelp-1.0.3/:/gnu/store/07ixxy8y5y5paqsyfnjhzhhm1hwv48rb-python-sphinxcontrib-jsmath-1.0.1/:/gnu/store/294kpdr42a39ilibgxqfjyl4r8vxnzap-python-sphinxcontrib-htmlhelp-2.0.0/:/gnu/store/9ifsv5p3aailw23vgi6cwnbqnmmji1xl-python-sphinxcontrib-devhelp-1.0.2/:/gnu/store/2n06qjpp5khn0ihbax3873hiq09dmc41-python-sphinxcontrib-applehelp-1.0.2/:/gnu/store/8ws27cmsbsni57c8arivk5612vynwdbd-python-sphinx-alabaster-theme-0.7.12/:/gnu/store/q0xyja8yqfv1sv04z7iziryx7r592kxc-python-snowballstemmer-2.0.0/:/gnu/store/r7ra7fdssw24vwflglz2cdm1gyvlhjyj-python-requests-2.26.0/:/gnu/store/azbw1ab6lyvvr0aw1kc4zp35c1j69jgq-python-packaging-21.3/:/gnu/store/1pv5skadhfb0m6rw0jsf74xrc5bq5z2h-python-imagesize-1.2.0/:/gnu/store/31k3pfz2y300zjwah25hrrj5kk1j38xb-python-jinja2-3.0.1/:/gnu/store/77gljavy85dklky861ppixf3l93kzihl-python-docutils-0.17.1/:/gnu/store/hf1cy3a3aib7br8bykr1gng0rxbsi6y6-python-babel-2.9.0/:/gnu/store/30hhcvxcps4gsl3w0hdmd2rm2kggm9pg-libpciaccess-0.16/:/gnu/store/fgc0c133apyavjkjhjbz54afy3100wxq-linux-libre-headers-5.10.35/:/gnu/store/fw4qn1lfl4hhzlfbaqrs2x59vidk1r49-python-urllib3-1.26.7/:/gnu/store/g0dm1kajz0kszdl7szcqjjpsl4hj2ca5-python-idna-2.10/:/gnu/store/canznnsg7232z91zz2cms8cxd2xh1h8f-python-charset-normalizer-2.0.5/:/gnu/store/rkdjp0f6mwj1sbvpcwgs91ifr0gz68m9-python-chardet-3.0.4/:/gnu/store/q1vkklf682dms37d5jm5hli604zibngc-python-certifi-2020.12.5/:/gnu/store/5fhprxfscbxhwzb6sppykx1f2ak105h7-python-six-1.16.0/:/gnu/store/i80ikmvxv4c31dvvxq1ifsch6hg7dilk-python-pyparsing-3.0.6/:/gnu/store/qzj9a9nc03qn7d5pcszjnfm6pzc0xq8x-python-markupsafe-2.0.1/:/gnu/store/9ll6pbzygfzij5d3a0nc7bkb6lwffdrx-python-pytz-2021.1/:/gnu/store/ijhldls6qvzm42mb330nvcaryd0pfh1f-python-pysocks-1.7.1/:/gnu/store/xhcjng3ck0slmw5n4i7mr6pnm7dyhg5p-python-pyopenssl-20.0.1/:/gnu/store/80lrkkm5ivzsm899rakz4b4sh7jwafj0-python-cryptography-3.3.1/:/gnu/store/s5jl6b9c73zdnsgxfgjy6la2hcniggym-python-iso8601-0.1.13/:/gnu/store/kxsvka04faaqk5gs14bkzw65kazg1dr0-python-cffi-1.14.4/:/gnu/store/dj0yvizwi0b2rmp5pz60rwcmfkbz6i0n-python-asn1crypto-1.4.0/:/gnu/store/22kmdaiz21mw7is7kb6b38kbgrmyh5rs-python-pycparser-2.20/'
environment variable `SSL_CERT_DIR' unset
environment variable `SSL_CERT_FILE' unset
environment variable `PKG_CONFIG_PATH' set to `/gnu/store/jaalpl5m5a8cpidv3j96yfrrzal0hpqz-graphviz-2.49.0/lib/pkgconfig:/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/lib/pkgconfig:/gnu/store/pvymz0z2mccih5rbf40fn49928b89zr6-fftwf-3.3.8/lib/pkgconfig:/gnu/store/m022qas3nfacivw2xsw8blfsw029vp6z-hwloc-2.7.1-lib/lib/pkgconfig:/gnu/store/5bwhad5kj2bfrfw9663433c1gmgx78gm-lmfit-8.2.2/lib/pkgconfig:/gnu/store/yd77q2zbdch5cis3xg1ajsb6g5wmlwyr-openblas-0.3.18/lib/pkgconfig:/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0/lib/pkgconfig:/gnu/store/11gnzwa2qbqlg4pziysdk2fkbhrhhwrc-xz-5.2.5/lib/pkgconfig:/gnu/store/6s9hy00b522g268spk3qasd8j8mg5z7r-file-5.39/lib/pkgconfig:/gnu/store/30hhcvxcps4gsl3w0hdmd2rm2kggm9pg-libpciaccess-0.16/lib/pkgconfig'
environment variable `GUIX_PYTHONPATH' set to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/lib/python3.9/site-packages:/gnu/store/p53rihy4z18p8gwhjp5aad2vdqfsvwr7-python-pygments-2.8.1/lib/python3.9/site-packages:/gnu/store/1fi0zgxjv50r4p799zb2jf5ympn29kdf-python-sphinx-4.2.0/lib/python3.9/site-packages:/gnu/store/dqs4rd8vhxfqz9d6yisgsw9r31iljdbm-python-sphinxcontrib-serializinghtml-1.1.5/lib/python3.9/site-packages:/gnu/store/z7snazkia23h058k2l6yaa91zv56s7yj-python-sphinxcontrib-qthelp-1.0.3/lib/python3.9/site-packages:/gnu/store/07ixxy8y5y5paqsyfnjhzhhm1hwv48rb-python-sphinxcontrib-jsmath-1.0.1/lib/python3.9/site-packages:/gnu/store/294kpdr42a39ilibgxqfjyl4r8vxnzap-python-sphinxcontrib-htmlhelp-2.0.0/lib/python3.9/site-packages:/gnu/store/9ifsv5p3aailw23vgi6cwnbqnmmji1xl-python-sphinxcontrib-devhelp-1.0.2/lib/python3.9/site-packages:/gnu/store/2n06qjpp5khn0ihbax3873hiq09dmc41-python-sphinxcontrib-applehelp-1.0.2/lib/python3.9/site-packages:/gnu/store/8ws27cmsbsni57c8arivk5612vynwdbd-python-sphinx-alabaster-theme-0.7.12/lib/python3.9/site-packages:/gnu/store/q0xyja8yqfv1sv04z7iziryx7r592kxc-python-snowballstemmer-2.0.0/lib/python3.9/site-packages:/gnu/store/r7ra7fdssw24vwflglz2cdm1gyvlhjyj-python-requests-2.26.0/lib/python3.9/site-packages:/gnu/store/azbw1ab6lyvvr0aw1kc4zp35c1j69jgq-python-packaging-21.3/lib/python3.9/site-packages:/gnu/store/1pv5skadhfb0m6rw0jsf74xrc5bq5z2h-python-imagesize-1.2.0/lib/python3.9/site-packages:/gnu/store/31k3pfz2y300zjwah25hrrj5kk1j38xb-python-jinja2-3.0.1/lib/python3.9/site-packages:/gnu/store/77gljavy85dklky861ppixf3l93kzihl-python-docutils-0.17.1/lib/python3.9/site-packages:/gnu/store/hf1cy3a3aib7br8bykr1gng0rxbsi6y6-python-babel-2.9.0/lib/python3.9/site-packages:/gnu/store/fw4qn1lfl4hhzlfbaqrs2x59vidk1r49-python-urllib3-1.26.7/lib/python3.9/site-packages:/gnu/store/g0dm1kajz0kszdl7szcqjjpsl4hj2ca5-python-idna-2.10/lib/python3.9/site-packages:/gnu/store/canznnsg7232z91zz2cms8cxd2xh1h8f-python-charset-normalizer-2.0.5/lib/python3.9/site-packages:/gnu/store/rkdjp0f6mwj1sbvpcwgs91ifr0gz68m9-python-chardet-3.0.4/lib/python3.9/site-packages:/gnu/store/q1vkklf682dms37d5jm5hli604zibngc-python-certifi-2020.12.5/lib/python3.9/site-packages:/gnu/store/5fhprxfscbxhwzb6sppykx1f2ak105h7-python-six-1.16.0/lib/python3.9/site-packages:/gnu/store/i80ikmvxv4c31dvvxq1ifsch6hg7dilk-python-pyparsing-3.0.6/lib/python3.9/site-packages:/gnu/store/qzj9a9nc03qn7d5pcszjnfm6pzc0xq8x-python-markupsafe-2.0.1/lib/python3.9/site-packages:/gnu/store/9ll6pbzygfzij5d3a0nc7bkb6lwffdrx-python-pytz-2021.1/lib/python3.9/site-packages:/gnu/store/ijhldls6qvzm42mb330nvcaryd0pfh1f-python-pysocks-1.7.1/lib/python3.9/site-packages:/gnu/store/xhcjng3ck0slmw5n4i7mr6pnm7dyhg5p-python-pyopenssl-20.0.1/lib/python3.9/site-packages:/gnu/store/80lrkkm5ivzsm899rakz4b4sh7jwafj0-python-cryptography-3.3.1/lib/python3.9/site-packages:/gnu/store/s5jl6b9c73zdnsgxfgjy6la2hcniggym-python-iso8601-0.1.13/lib/python3.9/site-packages:/gnu/store/kxsvka04faaqk5gs14bkzw65kazg1dr0-python-cffi-1.14.4/lib/python3.9/site-packages:/gnu/store/dj0yvizwi0b2rmp5pz60rwcmfkbz6i0n-python-asn1crypto-1.4.0/lib/python3.9/site-packages:/gnu/store/22kmdaiz21mw7is7kb6b38kbgrmyh5rs-python-pycparser-2.20/lib/python3.9/site-packages'
environment variable `PYTHONTZPATH' unset
environment variable `PERL5LIB' set to `/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/lib/perl5/site_perl'
environment variable `BASH_LOADABLES_PATH' unset
environment variable `C_INCLUDE_PATH' set to `/gnu/store/jaalpl5m5a8cpidv3j96yfrrzal0hpqz-graphviz-2.49.0/include:/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/include:/gnu/store/pvymz0z2mccih5rbf40fn49928b89zr6-fftwf-3.3.8/include:/gnu/store/m022qas3nfacivw2xsw8blfsw029vp6z-hwloc-2.7.1-lib/include:/gnu/store/5bwhad5kj2bfrfw9663433c1gmgx78gm-lmfit-8.2.2/include:/gnu/store/yd77q2zbdch5cis3xg1ajsb6g5wmlwyr-openblas-0.3.18/include:/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0/include:/gnu/store/8mx483xb6b6xjdmyd9hax1aywfs6v42w-tng-1.8.2/include:/gnu/store/iipgssk08gmmkwxv5iyv1lm3blilvdir-bzip2-1.0.8/include:/gnu/store/11gnzwa2qbqlg4pziysdk2fkbhrhhwrc-xz-5.2.5/include:/gnu/store/6s9hy00b522g268spk3qasd8j8mg5z7r-file-5.39/include:/gnu/store/7mfpmrswg4y7apk0hri9hiwgn6xbbh9q-gawk-5.1.0/include:/gnu/store/zz2br0lgdw6j6x6yvd0x49775gwn3bry-make-4.3/include:/gnu/store/xnxxwmcdv1fl14y9a7c9bkxx8r0rza1j-binutils-2.37/include:/gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/include:/gnu/store/bgw8ciirrbpxbds3v9wklf1isysqjlsl-glibc-2.33/include:/gnu/store/30hhcvxcps4gsl3w0hdmd2rm2kggm9pg-libpciaccess-0.16/include:/gnu/store/fgc0c133apyavjkjhjbz54afy3100wxq-linux-libre-headers-5.10.35/include'
environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/jaalpl5m5a8cpidv3j96yfrrzal0hpqz-graphviz-2.49.0/include:/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/include:/gnu/store/pvymz0z2mccih5rbf40fn49928b89zr6-fftwf-3.3.8/include:/gnu/store/m022qas3nfacivw2xsw8blfsw029vp6z-hwloc-2.7.1-lib/include:/gnu/store/5bwhad5kj2bfrfw9663433c1gmgx78gm-lmfit-8.2.2/include:/gnu/store/yd77q2zbdch5cis3xg1ajsb6g5wmlwyr-openblas-0.3.18/include:/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0/include:/gnu/store/8mx483xb6b6xjdmyd9hax1aywfs6v42w-tng-1.8.2/include:/gnu/store/iipgssk08gmmkwxv5iyv1lm3blilvdir-bzip2-1.0.8/include:/gnu/store/11gnzwa2qbqlg4pziysdk2fkbhrhhwrc-xz-5.2.5/include:/gnu/store/6s9hy00b522g268spk3qasd8j8mg5z7r-file-5.39/include:/gnu/store/7mfpmrswg4y7apk0hri9hiwgn6xbbh9q-gawk-5.1.0/include:/gnu/store/zz2br0lgdw6j6x6yvd0x49775gwn3bry-make-4.3/include:/gnu/store/xnxxwmcdv1fl14y9a7c9bkxx8r0rza1j-binutils-2.37/include:/gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/include/c++:/gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/include:/gnu/store/bgw8ciirrbpxbds3v9wklf1isysqjlsl-glibc-2.33/include:/gnu/store/30hhcvxcps4gsl3w0hdmd2rm2kggm9pg-libpciaccess-0.16/include:/gnu/store/fgc0c133apyavjkjhjbz54afy3100wxq-linux-libre-headers-5.10.35/include'
environment variable `LIBRARY_PATH' set to `/gnu/store/jaalpl5m5a8cpidv3j96yfrrzal0hpqz-graphviz-2.49.0/lib:/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/lib:/gnu/store/p53rihy4z18p8gwhjp5aad2vdqfsvwr7-python-pygments-2.8.1/lib:/gnu/store/1fi0zgxjv50r4p799zb2jf5ympn29kdf-python-sphinx-4.2.0/lib:/gnu/store/pvymz0z2mccih5rbf40fn49928b89zr6-fftwf-3.3.8/lib:/gnu/store/m022qas3nfacivw2xsw8blfsw029vp6z-hwloc-2.7.1-lib/lib:/gnu/store/5bwhad5kj2bfrfw9663433c1gmgx78gm-lmfit-8.2.2/lib:/gnu/store/yd77q2zbdch5cis3xg1ajsb6g5wmlwyr-openblas-0.3.18/lib:/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/lib:/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0/lib:/gnu/store/8mx483xb6b6xjdmyd9hax1aywfs6v42w-tng-1.8.2/lib:/gnu/store/iipgssk08gmmkwxv5iyv1lm3blilvdir-bzip2-1.0.8/lib:/gnu/store/11gnzwa2qbqlg4pziysdk2fkbhrhhwrc-xz-5.2.5/lib:/gnu/store/6s9hy00b522g268spk3qasd8j8mg5z7r-file-5.39/lib:/gnu/store/7mfpmrswg4y7apk0hri9hiwgn6xbbh9q-gawk-5.1.0/lib:/gnu/store/xnxxwmcdv1fl14y9a7c9bkxx8r0rza1j-binutils-2.37/lib:/gnu/store/bgw8ciirrbpxbds3v9wklf1isysqjlsl-glibc-2.33/lib:/gnu/store/1xfiv21xwzqf3j56phh8j2lg227391y5-glibc-2.33-static/lib:/gnu/store/w34424h2ihfqfxn72aj08h8z5rjvfk0r-glibc-utf8-locales-2.33/lib:/gnu/store/dqs4rd8vhxfqz9d6yisgsw9r31iljdbm-python-sphinxcontrib-serializinghtml-1.1.5/lib:/gnu/store/z7snazkia23h058k2l6yaa91zv56s7yj-python-sphinxcontrib-qthelp-1.0.3/lib:/gnu/store/07ixxy8y5y5paqsyfnjhzhhm1hwv48rb-python-sphinxcontrib-jsmath-1.0.1/lib:/gnu/store/294kpdr42a39ilibgxqfjyl4r8vxnzap-python-sphinxcontrib-htmlhelp-2.0.0/lib:/gnu/store/9ifsv5p3aailw23vgi6cwnbqnmmji1xl-python-sphinxcontrib-devhelp-1.0.2/lib:/gnu/store/2n06qjpp5khn0ihbax3873hiq09dmc41-python-sphinxcontrib-applehelp-1.0.2/lib:/gnu/store/8ws27cmsbsni57c8arivk5612vynwdbd-python-sphinx-alabaster-theme-0.7.12/lib:/gnu/store/q0xyja8yqfv1sv04z7iziryx7r592kxc-python-snowballstemmer-2.0.0/lib:/gnu/store/r7ra7fdssw24vwflglz2cdm1gyvlhjyj-python-requests-2.26.0/lib:/gnu/store/azbw1ab6lyvvr0aw1kc4zp35c1j69jgq-python-packaging-21.3/lib:/gnu/store/1pv5skadhfb0m6rw0jsf74xrc5bq5z2h-python-imagesize-1.2.0/lib:/gnu/store/31k3pfz2y300zjwah25hrrj5kk1j38xb-python-jinja2-3.0.1/lib:/gnu/store/77gljavy85dklky861ppixf3l93kzihl-python-docutils-0.17.1/lib:/gnu/store/hf1cy3a3aib7br8bykr1gng0rxbsi6y6-python-babel-2.9.0/lib:/gnu/store/30hhcvxcps4gsl3w0hdmd2rm2kggm9pg-libpciaccess-0.16/lib:/gnu/store/fw4qn1lfl4hhzlfbaqrs2x59vidk1r49-python-urllib3-1.26.7/lib:/gnu/store/g0dm1kajz0kszdl7szcqjjpsl4hj2ca5-python-idna-2.10/lib:/gnu/store/canznnsg7232z91zz2cms8cxd2xh1h8f-python-charset-normalizer-2.0.5/lib:/gnu/store/rkdjp0f6mwj1sbvpcwgs91ifr0gz68m9-python-chardet-3.0.4/lib:/gnu/store/q1vkklf682dms37d5jm5hli604zibngc-python-certifi-2020.12.5/lib:/gnu/store/5fhprxfscbxhwzb6sppykx1f2ak105h7-python-six-1.16.0/lib:/gnu/store/i80ikmvxv4c31dvvxq1ifsch6hg7dilk-python-pyparsing-3.0.6/lib:/gnu/store/qzj9a9nc03qn7d5pcszjnfm6pzc0xq8x-python-markupsafe-2.0.1/lib:/gnu/store/9ll6pbzygfzij5d3a0nc7bkb6lwffdrx-python-pytz-2021.1/lib:/gnu/store/ijhldls6qvzm42mb330nvcaryd0pfh1f-python-pysocks-1.7.1/lib:/gnu/store/xhcjng3ck0slmw5n4i7mr6pnm7dyhg5p-python-pyopenssl-20.0.1/lib:/gnu/store/80lrkkm5ivzsm899rakz4b4sh7jwafj0-python-cryptography-3.3.1/lib:/gnu/store/s5jl6b9c73zdnsgxfgjy6la2hcniggym-python-iso8601-0.1.13/lib:/gnu/store/kxsvka04faaqk5gs14bkzw65kazg1dr0-python-cffi-1.14.4/lib:/gnu/store/dj0yvizwi0b2rmp5pz60rwcmfkbz6i0n-python-asn1crypto-1.4.0/lib:/gnu/store/22kmdaiz21mw7is7kb6b38kbgrmyh5rs-python-pycparser-2.20/lib'
environment variable `GUIX_LOCPATH' set to `/gnu/store/w34424h2ihfqfxn72aj08h8z5rjvfk0r-glibc-utf8-locales-2.33/lib/locale'
phase `set-paths' succeeded after 0.2 seconds
starting phase `install-locale'
using 'en_US.utf8' locale for category "LC_ALL"
phase `install-locale' succeeded after 0.0 seconds
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gromacs-2020.2/src/gromacs/mdrun/simulatorbuilder.h
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gromacs-2020.2/src/gromacs/mdspan/
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gromacs-2020.2/src/gromacs/mdspan/tests/accessor_policy.cpp
gromacs-2020.2/src/gromacs/mdspan/tests/extensions.cpp
gromacs-2020.2/src/gromacs/mdspan/tests/extents.cpp
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gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecEw_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp
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gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_ElecRF_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_common.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_inner.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_outer.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernel_prune.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_2xmm/kernels.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEwTwinCut_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecEw_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTabTwinCut_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecQSTab_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJCombLB_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJEwCombGeom_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJFSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJPSw_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_F.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_ElecRF_VdwLJ_VgrpF.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_common.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_inner.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_outer.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.cpp
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernel_prune.h
gromacs-2020.2/src/gromacs/nbnxm/kernels_simd_4xm/kernels.h
gromacs-2020.2/src/gromacs/nbnxm/nbnxm.cpp
gromacs-2020.2/src/gromacs/nbnxm/nbnxm.h
gromacs-2020.2/src/gromacs/nbnxm/nbnxm_geometry.cpp
gromacs-2020.2/src/gromacs/nbnxm/nbnxm_geometry.h
gromacs-2020.2/src/gromacs/nbnxm/nbnxm_gpu.h
gromacs-2020.2/src/gromacs/nbnxm/nbnxm_setup.cpp
gromacs-2020.2/src/gromacs/nbnxm/nbnxm_simd.h
gromacs-2020.2/src/gromacs/nbnxm/opencl/
gromacs-2020.2/src/gromacs/nbnxm/opencl/CMakeLists.txt
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl.cpp
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_consts.h
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_data_mgmt.cpp
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_internal.h
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_jit_support.cpp
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernel.clh
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_pruneonly.clh
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernel_utils.clh
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.cl
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernels.clh
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen.clh
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_kernels_fastgen_add_twincut.clh
gromacs-2020.2/src/gromacs/nbnxm/opencl/nbnxm_ocl_types.h
gromacs-2020.2/src/gromacs/nbnxm/pairlist.cpp
gromacs-2020.2/src/gromacs/nbnxm/pairlist.h
gromacs-2020.2/src/gromacs/nbnxm/pairlist_simd_2xmm.h
gromacs-2020.2/src/gromacs/nbnxm/pairlist_simd_4xm.h
gromacs-2020.2/src/gromacs/nbnxm/pairlist_tuning.cpp
gromacs-2020.2/src/gromacs/nbnxm/pairlist_tuning.h
gromacs-2020.2/src/gromacs/nbnxm/pairlistparams.cpp
gromacs-2020.2/src/gromacs/nbnxm/pairlistparams.h
gromacs-2020.2/src/gromacs/nbnxm/pairlistset.cpp
gromacs-2020.2/src/gromacs/nbnxm/pairlistset.h
gromacs-2020.2/src/gromacs/nbnxm/pairlistsets.h
gromacs-2020.2/src/gromacs/nbnxm/pairlistwork.h
gromacs-2020.2/src/gromacs/nbnxm/pairsearch.cpp
gromacs-2020.2/src/gromacs/nbnxm/pairsearch.h
gromacs-2020.2/src/gromacs/nbnxm/prunekerneldispatch.cpp
gromacs-2020.2/src/gromacs/onlinehelp/
gromacs-2020.2/src/gromacs/onlinehelp/CMakeLists.txt
gromacs-2020.2/src/gromacs/onlinehelp/helpformat.cpp
gromacs-2020.2/src/gromacs/onlinehelp/helpformat.h
gromacs-2020.2/src/gromacs/onlinehelp/helpmanager.cpp
gromacs-2020.2/src/gromacs/onlinehelp/helpmanager.h
gromacs-2020.2/src/gromacs/onlinehelp/helptopic.cpp
gromacs-2020.2/src/gromacs/onlinehelp/helptopic.h
gromacs-2020.2/src/gromacs/onlinehelp/helpwritercontext.cpp
gromacs-2020.2/src/gromacs/onlinehelp/helpwritercontext.h
gromacs-2020.2/src/gromacs/onlinehelp/ihelptopic.h
gromacs-2020.2/src/gromacs/onlinehelp/rstparser.cpp
gromacs-2020.2/src/gromacs/onlinehelp/rstparser.h
gromacs-2020.2/src/gromacs/onlinehelp/tests/
gromacs-2020.2/src/gromacs/onlinehelp/tests/CMakeLists.txt
gromacs-2020.2/src/gromacs/onlinehelp/tests/helpformat.cpp
gromacs-2020.2/src/gromacs/onlinehelp/tests/helpmanager.cpp
gromacs-2020.2/src/gromacs/onlinehelp/tests/helpwritercontext.cpp
gromacs-2020.2/src/gromacs/onlinehelp/tests/mock_helptopic.cpp
gromacs-2020.2/src/gromacs/onlinehelp/tests/mock_helptopic.h
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/HelpTopicFormattingTest_FormatsCompositeTopicWithSubTopics.xml
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/HelpTopicFormattingTest_FormatsSimpleTopic.xml
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/HelpWriterContextTest_CleansUpExtraWhitespace.xml
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/HelpWriterContextTest_FormatsBulletList.xml
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/HelpWriterContextTest_FormatsEnumeratedList.xml
gromacs-2020.2/src/gromacs/onlinehelp/tests/refdata/HelpWriterContextTest_FormatsGridTable.xml
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gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_none_pme_switch/input/system.gro
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_none_pme_switch/input/system.mdp
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_none_pme_switch/input/system.top
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_pme/
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_pme/input/
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_pme/input/system.gro
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_pme/input/system.mdp
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_pme/input/system.top
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_switch/
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_switch/input/
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_switch/input/system.gro
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_switch/input/system.mdp
gromacs-2020.2/tests/physicalvalidation/systems/int_water_md_verlet_settle_pme_switch/input/system.top
gromacs-2020.2/tests/physicalvalidation/systems.json
gromacs-2020.2/tests/physicalvalidation/systems_d.json
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`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googlemock/src/gmock-cardinalities.cc' -> `src/external/googletest/googlemock/src/gmock-cardinalities.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googlemock/src/gmock-all.cc' -> `src/external/googletest/googlemock/src/gmock-all.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googlemock/src/gmock-internal-utils.cc' -> `src/external/googletest/googlemock/src/gmock-internal-utils.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googlemock/src/gmock_main.cc' -> `src/external/googletest/googlemock/src/gmock_main.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googlemock/src/gmock.cc' -> `src/external/googletest/googlemock/src/gmock.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/_config.yml' -> `src/external/googletest/docs/_config.yml'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/platforms.md' -> `src/external/googletest/docs/platforms.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/gmock_cook_book.md' -> `src/external/googletest/docs/gmock_cook_book.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/quickstart-cmake.md' -> `src/external/googletest/docs/quickstart-cmake.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/gmock_for_dummies.md' -> `src/external/googletest/docs/gmock_for_dummies.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/gmock_faq.md' -> `src/external/googletest/docs/gmock_faq.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/community_created_documentation.md' -> `src/external/googletest/docs/community_created_documentation.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/pkgconfig.md' -> `src/external/googletest/docs/pkgconfig.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/primer.md' -> `src/external/googletest/docs/primer.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/samples.md' -> `src/external/googletest/docs/samples.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/faq.md' -> `src/external/googletest/docs/faq.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/index.md' -> `src/external/googletest/docs/index.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/advanced.md' -> `src/external/googletest/docs/advanced.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/gmock_cheat_sheet.md' -> `src/external/googletest/docs/gmock_cheat_sheet.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/quickstart-bazel.md' -> `src/external/googletest/docs/quickstart-bazel.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/_layouts/default.html' -> `src/external/googletest/docs/_layouts/default.html'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/assets/css/style.scss' -> `src/external/googletest/docs/assets/css/style.scss'
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`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/_data/navigation.yml' -> `src/external/googletest/docs/_data/navigation.yml'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/reference/matchers.md' -> `src/external/googletest/docs/reference/matchers.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/reference/mocking.md' -> `src/external/googletest/docs/reference/mocking.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/reference/actions.md' -> `src/external/googletest/docs/reference/actions.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/reference/testing.md' -> `src/external/googletest/docs/reference/testing.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/docs/reference/assertions.md' -> `src/external/googletest/docs/reference/assertions.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/ci/linux-presubmit.sh' -> `src/external/googletest/ci/linux-presubmit.sh'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/ci/macos-presubmit.sh' -> `src/external/googletest/ci/macos-presubmit.sh'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/README.md' -> `src/external/googletest/googletest/README.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/CMakeLists.txt' -> `src/external/googletest/googletest/CMakeLists.txt'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/prime_tables.h' -> `src/external/googletest/googletest/samples/prime_tables.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample4.cc' -> `src/external/googletest/googletest/samples/sample4.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample3_unittest.cc' -> `src/external/googletest/googletest/samples/sample3_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample9_unittest.cc' -> `src/external/googletest/googletest/samples/sample9_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample3-inl.h' -> `src/external/googletest/googletest/samples/sample3-inl.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample7_unittest.cc' -> `src/external/googletest/googletest/samples/sample7_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample6_unittest.cc' -> `src/external/googletest/googletest/samples/sample6_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample4.h' -> `src/external/googletest/googletest/samples/sample4.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample4_unittest.cc' -> `src/external/googletest/googletest/samples/sample4_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample2_unittest.cc' -> `src/external/googletest/googletest/samples/sample2_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample10_unittest.cc' -> `src/external/googletest/googletest/samples/sample10_unittest.cc'
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`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample5_unittest.cc' -> `src/external/googletest/googletest/samples/sample5_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample1.h' -> `src/external/googletest/googletest/samples/sample1.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample2.h' -> `src/external/googletest/googletest/samples/sample2.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample1_unittest.cc' -> `src/external/googletest/googletest/samples/sample1_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/samples/sample8_unittest.cc' -> `src/external/googletest/googletest/samples/sample8_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/docs/README.md' -> `src/external/googletest/googletest/docs/README.md'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-break-on-failure-unittest.py' -> `src/external/googletest/googletest/test/googletest-break-on-failure-unittest.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-throw-on-failure-test_.cc' -> `src/external/googletest/googletest/test/googletest-throw-on-failure-test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-test-part-test.cc' -> `src/external/googletest/googletest/test/googletest-test-part-test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-param-test-invalid-name1-test_.cc' -> `src/external/googletest/googletest/test/googletest-param-test-invalid-name1-test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_unittest.cc' -> `src/external/googletest/googletest/test/gtest_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-json-output-unittest.py' -> `src/external/googletest/googletest/test/googletest-json-output-unittest.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_prod_test.cc' -> `src/external/googletest/googletest/test/gtest_prod_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_skip_environment_check_output_test.py' -> `src/external/googletest/googletest/test/gtest_skip_environment_check_output_test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-color-test_.cc' -> `src/external/googletest/googletest/test/googletest-color-test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-output-test-golden-lin.txt' -> `src/external/googletest/googletest/test/googletest-output-test-golden-lin.txt'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest-typed-test_test.cc' -> `src/external/googletest/googletest/test/gtest-typed-test_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-list-tests-unittest_.cc' -> `src/external/googletest/googletest/test/googletest-list-tests-unittest_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-param-test-test.cc' -> `src/external/googletest/googletest/test/googletest-param-test-test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-shuffle-test.py' -> `src/external/googletest/googletest/test/googletest-shuffle-test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-failfast-unittest.py' -> `src/external/googletest/googletest/test/googletest-failfast-unittest.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-global-environment-unittest.py' -> `src/external/googletest/googletest/test/googletest-global-environment-unittest.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-filter-unittest.py' -> `src/external/googletest/googletest/test/googletest-filter-unittest.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-break-on-failure-unittest_.cc' -> `src/external/googletest/googletest/test/googletest-break-on-failure-unittest_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-shuffle-test_.cc' -> `src/external/googletest/googletest/test/googletest-shuffle-test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-message-test.cc' -> `src/external/googletest/googletest/test/googletest-message-test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_xml_outfile1_test_.cc' -> `src/external/googletest/googletest/test/gtest_xml_outfile1_test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-throw-on-failure-test.py' -> `src/external/googletest/googletest/test/googletest-throw-on-failure-test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_skip_test.cc' -> `src/external/googletest/googletest/test/gtest_skip_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_main_unittest.cc' -> `src/external/googletest/googletest/test/gtest_main_unittest.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-uninitialized-test_.cc' -> `src/external/googletest/googletest/test/googletest-uninitialized-test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-param-test-test.h' -> `src/external/googletest/googletest/test/googletest-param-test-test.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest-typed-test2_test.cc' -> `src/external/googletest/googletest/test/gtest-typed-test2_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_skip_check_output_test.py' -> `src/external/googletest/googletest/test/gtest_skip_check_output_test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/production.cc' -> `src/external/googletest/googletest/test/production.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_help_test_.cc' -> `src/external/googletest/googletest/test/gtest_help_test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-env-var-test.py' -> `src/external/googletest/googletest/test/googletest-env-var-test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-death-test_ex_test.cc' -> `src/external/googletest/googletest/test/googletest-death-test_ex_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_xml_outfiles_test.py' -> `src/external/googletest/googletest/test/gtest_xml_outfiles_test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-port-test.cc' -> `src/external/googletest/googletest/test/googletest-port-test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_help_test.py' -> `src/external/googletest/googletest/test/gtest_help_test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/production.h' -> `src/external/googletest/googletest/test/production.h'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-filepath-test.cc' -> `src/external/googletest/googletest/test/googletest-filepath-test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_xml_outfile2_test_.cc' -> `src/external/googletest/googletest/test/gtest_xml_outfile2_test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-output-test.py' -> `src/external/googletest/googletest/test/googletest-output-test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_repeat_test.cc' -> `src/external/googletest/googletest/test/gtest_repeat_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_skip_in_environment_setup_test.cc' -> `src/external/googletest/googletest/test/gtest_skip_in_environment_setup_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-output-test_.cc' -> `src/external/googletest/googletest/test/googletest-output-test_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-param-test-invalid-name2-test.py' -> `src/external/googletest/googletest/test/googletest-param-test-invalid-name2-test.py'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest-unittest-api_test.cc' -> `src/external/googletest/googletest/test/gtest-unittest-api_test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-param-test2-test.cc' -> `src/external/googletest/googletest/test/googletest-param-test2-test.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/googletest-global-environment-unittest_.cc' -> `src/external/googletest/googletest/test/googletest-global-environment-unittest_.cc'
`/gnu/store/xxwj8gyvhk679li0x8i3zmrkldzhjnhc-googletest-1.11.0-checkout/googletest/test/gtest_sole_header_test.cc' -> `src/external/googletest/googletest/test/gtest_sole_header_test.cc'
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phase `fixes' succeeded after 0.1 seconds
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patch-shebang: ./admin/ci-scripts/build-and-test-py-gmxapi-0.1.sh: changing `/usr/bin/env bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/ci-scripts/build-and-test-py-gmxapi-0.2.sh: changing `/usr/bin/env bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/ci-scripts/build-and-test-sample_restraint-2020.sh: changing `/usr/bin/env bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/ci-scripts/build-and-test-sample_restraint-2021.sh: changing `/usr/bin/env bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/clang-format.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/clang-tidy.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/containers/buildall.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/containers/scripted_gmx_docker_builds.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./admin/copyright.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./admin/copyright.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/createFileHash.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./admin/dockerfiles/buildall.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/git-pre-commit: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/iwyu.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/reformat_all.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./admin/uncrustify.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./cmake/with_asan_opts.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./docs/doxygen/check-source.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./docs/doxygen/doxygenxml.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./docs/doxygen/gmxtree.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./docs/doxygen/graphbuilder.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./docs/doxygen/includesorter.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./docs/doxygen/reporter.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./docs/manual/subindex: changing `/usr/bin/awk' to `/gnu/store/7mfpmrswg4y7apk0hri9hiwgn6xbbh9q-gawk-5.1.0/bin/awk'
patch-shebang: ./docs/reference-manual/plots/myvi: warning: no binary for interpreter `csh' found in $PATH
patch-shebang: ./python_packaging/docker/entrypoint.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/docker/notebook: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/ci_scripts/install_gromacs_2019.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/ci_scripts/install_gromacs_devel.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/ci_scripts/pygmx_0_0_7.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/ci_scripts/pygmx_devel.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/ci_scripts/sample_restraint.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/examples/job.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/sample_restraint/examples/restrained-ensemble.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./python_packaging/sample_restraint/examples/strip_notebook.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./python_packaging/scripts/run_acceptance_test: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/scripts/run_full: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/scripts/run_full_mpi: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/scripts/run_gmxapi_unittest: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/scripts/run_sample_test: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/src/external/pybind/tools/check-style.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./python_packaging/src/external/pybind/tools/mkdoc.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./python_packaging/src/test/test_commandline.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./scripts/checkheaders.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./scripts/demux.pl: changing `/usr/bin/perl' to `/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/bin/perl'
patch-shebang: ./scripts/grompplog2top: warning: no binary for interpreter `csh' found in $PATH
patch-shebang: ./scripts/make_gromos_bon.pl: changing `/usr/bin/perl' to `/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/bin/perl'
patch-shebang: ./scripts/make_gromos_nb.pl: changing `/usr/bin/perl' to `/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/bin/perl'
patch-shebang: ./scripts/make_gromos_rtp.pl: changing `/usr/bin/perl' to `/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/bin/perl'
patch-shebang: ./scripts/make_gromos_rtp.py: warning: no binary for interpreter `python2' found in $PATH
patch-shebang: ./scripts/xplor2gmx.pl: changing `/usr/bin/perl' to `/gnu/store/mrldnb8yyalfmb1s8w31xgalv98g77x8-perl-5.34.0/bin/perl'
patch-shebang: ./src/external/googletest/ci/linux-presubmit.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./src/external/googletest/ci/macos-presubmit.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./src/external/googletest/googlemock/scripts/fuse_gmock_files.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/cpp/ast.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/cpp/gmock_class.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/cpp/gmock_class_test.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/cpp/keywords.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/cpp/tokenize.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/cpp/utils.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/scripts/generator/gmock_gen.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/test/gmock_leak_test.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googlemock/test/gmock_output_test.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googletest/scripts/fuse_gtest_files.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googletest/scripts/gen_gtest_pred_impl.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googletest/scripts/gtest-config.in: changing `/bin/sh' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/sh'
patch-shebang: ./src/external/googletest/googletest/scripts/release_docs.py: warning: no binary for interpreter `python' found in $PATH
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patch-shebang: ./src/external/googletest/googletest/test/googletest-break-on-failure-unittest.py: warning: no binary for interpreter `python' found in $PATH
patch-shebang: ./src/external/googletest/googletest/test/googletest-catch-exceptions-test.py: warning: no binary for interpreter `python' found in $PATH
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patch-shebang: ./src/gromacs/nbnxm/kernel_file_generator/make_verlet_simd_kernel_files.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./src/gromacs/selection/regenerate_parser.sh: changing `/bin/bash' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/bash'
patch-shebang: ./src/gromacs/selection/tests/gensphere.py: changing `/usr/bin/env python3' to `/gnu/store/nbr167w0vkafa9r97i11dcir0c53jr1m-python-3.9.9/bin/python3'
patch-shebang: ./src/testutils/copy_xsl.sh: changing `/bin/sh' to `/gnu/store/sbnx4xjgw2f2c5hxvv2qfdiqqnqyi7zr-bash-minimal-5.1.8/bin/sh'
phase `patch-source-shebangs' succeeded after 1.4 seconds
starting phase `configure'
source directory: "/tmp/guix-build-gromacs-2020.2.drv-0/gromacs-2020.2" (relative from build: "../gromacs-2020.2")
build directory: "/tmp/guix-build-gromacs-2020.2.drv-0/build"
running 'cmake' with arguments ("../gromacs-2020.2" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/la707g80jvligg5180hcj1mscac8prka-gromacs-2020.2" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/la707g80jvligg5180hcj1mscac8prka-gromacs-2020.2/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-DGMX_DEVELOPER_BUILD=on" "-DGMX_USE_LMFIT=EXTERNAL" "-DGMX_BUILD_OWN_FFTW=off" "-DGMX_EXTERNAL_BLAS=on" "-DGMX_EXTERNAL_LAPACK=on" "-DGMX_EXTERNAL_TNG=on" "-DGMX_EXTERNAL_ZLIB=on" "-DGMX_EXTERNAL_TINYXML2=on" "-DTinyXML2_DIR=/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0" "-DSPHINX_EXECUTABLE_VERSION=4.2.0")
-- The C compiler identification is GNU 10.3.0
-- The CXX compiler identification is GNU 10.3.0
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /gnu/store/fnkgp9a8yq4401nijp8v5v7aq1vqrx70-gcc-10.3.0/bin/c++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Looking for NVIDIA GPUs present in the system
-- Could not detect NVIDIA GPUs
-- No compatible CUDA toolkit found (v5.0+), disabling native GPU acceleration
-- Found OpenMP_C: -fopenmp (found version "4.5") 
-- Found OpenMP_CXX: -fopenmp (found version "4.5") 
-- Found OpenMP: TRUE (found version "4.5")  
-- Performing Test CFLAGS_WARN
-- Performing Test CFLAGS_WARN - Success
-- Performing Test CFLAGS_WARN_EXTRA
-- Performing Test CFLAGS_WARN_EXTRA - Success
-- Performing Test CFLAGS_WARN_UNDEF
-- Performing Test CFLAGS_WARN_UNDEF - Success
-- Performing Test CFLAGS_WARN_REL
-- Performing Test CFLAGS_WARN_REL - Success
-- Performing Test CFLAGS_STRINGOP_TRUNCATION
-- Performing Test CFLAGS_STRINGOP_TRUNCATION - Success
-- Performing Test CFLAGS_EXCESS_PREC
-- Performing Test CFLAGS_EXCESS_PREC - Success
-- Performing Test CFLAGS_COPT
-- Performing Test CFLAGS_COPT - Success
-- Performing Test CFLAGS_NOINLINE
-- Performing Test CFLAGS_NOINLINE - Success
-- Performing Test CXXFLAGS_WARN
-- Performing Test CXXFLAGS_WARN - Success
-- Performing Test CXXFLAGS_WARN_EXTRA
-- Performing Test CXXFLAGS_WARN_EXTRA - Success
-- Performing Test CXXFLAGS_WARN_UNDEF
-- Performing Test CXXFLAGS_WARN_UNDEF - Success
-- Performing Test CXXFLAGS_WARN_REL
-- Performing Test CXXFLAGS_WARN_REL - Success
-- Performing Test CXXFLAGS_STRINGOP_TRUNCATION
-- Performing Test CXXFLAGS_STRINGOP_TRUNCATION - Success
-- Performing Test CXXFLAGS_EXCESS_PREC
-- Performing Test CXXFLAGS_EXCESS_PREC - Success
-- Performing Test CXXFLAGS_COPT
-- Performing Test CXXFLAGS_COPT - Success
-- Performing Test CXXFLAGS_NOINLINE
-- Performing Test CXXFLAGS_NOINLINE - Success
-- Looking for include file unistd.h
-- Looking for include file unistd.h - found
-- Looking for include file pwd.h
-- Looking for include file pwd.h - found
-- Looking for include file dirent.h
-- Looking for include file dirent.h - found
-- Looking for include file time.h
-- Looking for include file time.h - found
-- Looking for include file sys/time.h
-- Looking for include file sys/time.h - found
-- Looking for include file io.h
-- Looking for include file io.h - not found
-- Looking for include file sched.h
-- Looking for include file sched.h - found
-- Looking for include file xmmintrin.h
-- Looking for include file xmmintrin.h - not found
-- Looking for gettimeofday
-- Looking for gettimeofday - found
-- Looking for sysconf
-- Looking for sysconf - found
-- Looking for nice
-- Looking for nice - found
-- Looking for fsync
-- Looking for fsync - found
-- Looking for _fileno
-- Looking for _fileno - not found
-- Looking for fileno
-- Looking for fileno - found
-- Looking for _commit
-- Looking for _commit - not found
-- Looking for sigaction
-- Looking for sigaction - found
-- Performing Test HAVE_BUILTIN_CLZ
-- Performing Test HAVE_BUILTIN_CLZ - Success
-- Performing Test HAVE_BUILTIN_CLZLL
-- Performing Test HAVE_BUILTIN_CLZLL - Success
-- Looking for clock_gettime in rt
-- Looking for clock_gettime in rt - found
-- Looking for feenableexcept in m
-- Looking for feenableexcept in m - found
-- Looking for fedisableexcept in m
-- Looking for fedisableexcept in m - found
-- Checking for sched.h GNU affinity API
-- Performing Test sched_affinity_compile
-- Performing Test sched_affinity_compile - Success
-- Looking for include file mm_malloc.h
-- Looking for include file mm_malloc.h - found
-- Looking for include file malloc.h
-- Looking for include file malloc.h - found
-- Checking for _mm_malloc()
-- Checking for _mm_malloc() - supported
-- Looking for posix_memalign
-- Looking for posix_memalign - found
-- Looking for memalign
-- Looking for memalign - not found
-- Looking for HWLOC
-- Looking for hwloc_topology_init
-- Looking for hwloc_topology_init - found
-- hwloc version: 
-- Found HWLOC: /gnu/store/m022qas3nfacivw2xsw8blfsw029vp6z-hwloc-2.7.1-lib/lib/libhwloc.so (found suitable version "2.5.0", minimum required is "1.5") 
-- Performing Test TinyXML2_LINKS_OK
-- Performing Test TinyXML2_LINKS_OK - Success
CMake Warning (dev) at /gnu/store/7vfcp65x5ys1a3jal9qys1davs2zk9rs-cmake-minimal-3.21.4/share/cmake-3.21/Modules/FindPackageHandleStandardArgs.cmake:438 (message):
  The package name passed to `find_package_handle_standard_args` (TinyXML2)
  does not match the name of the calling package (TinyXML-2).  This can lead
  to problems in calling code that expects `find_package` result variables
  (e.g., `_FOUND`) to follow a certain pattern.
Call Stack (most recent call first):
  cmake/FindTinyXML-2.cmake:82 (find_package_handle_standard_args)
  CMakeLists.txt:525 (find_package)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Found TinyXML2: /gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0/include (found version "static const int TIXML2_MAJOR_VERSION = 8\;.static const int TIXML2_MINOR_VERSION = 0\;") 
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Looking for C++ include pthread.h
-- Looking for C++ include pthread.h - found
-- Atomic operations found
-- Performing Test PTHREAD_SETAFFINITY
-- Performing Test PTHREAD_SETAFFINITY - Success
-- Checking for GCC x86 inline asm
-- Checking for GCC x86 inline asm - not supported
-- Detected build CPU vendor - IBM
-- Detected build CPU brand - POWER9, altivec supported
-- Detected build CPU family - 0
-- Detected build CPU model - 0
-- Detected build CPU stepping - 0
-- Detected build CPU features - vmx vsx
-- Disabling RDTSCP support - not detected on the build host
-- Checking for 64-bit off_t
-- Checking for 64-bit off_t - present
-- Checking for fseeko/ftello
-- Checking for fseeko/ftello - present
-- Checking for SIGUSR1
-- Checking for SIGUSR1 - found
-- Checking for pipe support
-- Checking for system XDR support
-- Checking for system XDR support - not present
-- Detecting best SIMD instructions for this CPU
-- Detected best SIMD instructions for this CPU - IBM_VSX
CMake Error at cmake/gmxManageSimd.cmake:270 (message):
  IBM_VSX does not work together with gcc > 9.  Disable SIMD support
  (slower), or use an older version of the GNU compiler
Call Stack (most recent call first):
  CMakeLists.txt:691 (gmx_manage_simd)


-- Configuring incomplete, errors occurred!
See also "/tmp/guix-build-gromacs-2020.2.drv-0/build/CMakeFiles/CMakeOutput.log".
See also "/tmp/guix-build-gromacs-2020.2.drv-0/build/CMakeFiles/CMakeError.log".
error: in phase 'configure': uncaught exception:
%exception #<&invoke-error program: "cmake" arguments: ("../gromacs-2020.2" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/la707g80jvligg5180hcj1mscac8prka-gromacs-2020.2" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/la707g80jvligg5180hcj1mscac8prka-gromacs-2020.2/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-DGMX_DEVELOPER_BUILD=on" "-DGMX_USE_LMFIT=EXTERNAL" "-DGMX_BUILD_OWN_FFTW=off" "-DGMX_EXTERNAL_BLAS=on" "-DGMX_EXTERNAL_LAPACK=on" "-DGMX_EXTERNAL_TNG=on" "-DGMX_EXTERNAL_ZLIB=on" "-DGMX_EXTERNAL_TINYXML2=on" "-DTinyXML2_DIR=/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0" "-DSPHINX_EXECUTABLE_VERSION=4.2.0") exit-status: 1 term-signal: #f stop-signal: #f> 
phase `configure' failed after 16.4 seconds
command "cmake" "../gromacs-2020.2" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/la707g80jvligg5180hcj1mscac8prka-gromacs-2020.2" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/la707g80jvligg5180hcj1mscac8prka-gromacs-2020.2/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-DGMX_DEVELOPER_BUILD=on" "-DGMX_USE_LMFIT=EXTERNAL" "-DGMX_BUILD_OWN_FFTW=off" "-DGMX_EXTERNAL_BLAS=on" "-DGMX_EXTERNAL_LAPACK=on" "-DGMX_EXTERNAL_TNG=on" "-DGMX_EXTERNAL_ZLIB=on" "-DGMX_EXTERNAL_TINYXML2=on" "-DTinyXML2_DIR=/gnu/store/ih6bgzbv3r9admffz3ycdz90023mmwqn-tinyxml2-8.0.0" "-DSPHINX_EXECUTABLE_VERSION=4.2.0" failed with status 1