starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/bin:/gnu/store/6a3ymy9vbaygwsldw8irz33kyy0aw98z-tar-1.34/bin:/gnu/store/rzp5398xvpp7spisgb2790179gz46v8s-gzip-1.10/bin:/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/bin:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/bin:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/bin:/gnu/store/h8kf32n95mslqmb03j56r83qlnf85b23-diffutils-3.8/bin:/gnu/store/qs2mw307zfqrr9fngw9akkswnmqn1sca-patch-2.7.6/bin:/gnu/store/mgxsj8hplxszwygmxq6hgcn8pdrk9r4g-findutils-4.8.0/bin:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/bin:/gnu/store/gr9y4r21rqwy035a2z76i33apgav00iw-sed-4.8/bin:/gnu/store/q5xg9jg7gr38zpifjd425aj63nlsknz2-grep-3.6/bin:/gnu/store/xlah6by49301sbsf6h3skzm6lfi8g9xw-coreutils-8.32/bin:/gnu/store/l8jy7fdsy52wwf4zqwc6ddw66dhsiapq-make-4.3/bin:/gnu/store/r7fs2zhzy8839mr3rmkxg68bwzaf9b9s-bash-minimal-5.1.8/bin:/gnu/store/fz84qfpsm932j8jsgbav5ycv7fvn7pkj-ld-wrapper-0/bin:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/bin:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/bin:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/bin:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/sbin' environment variable `R_LIBS_SITE' unset environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/include:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/include:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/include:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/include:/gnu/store/l8jy7fdsy52wwf4zqwc6ddw66dhsiapq-make-4.3/include:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/include:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/include:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/include:/gnu/store/qkg8bndfinrvfs4798lhvchgh7j3sn9s-linux-libre-headers-5.10.35/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/include:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/include:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/include:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/include:/gnu/store/l8jy7fdsy52wwf4zqwc6ddw66dhsiapq-make-4.3/include:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/include:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/include/c++:/gnu/store/yrzlcfn77hw34rcjx9dcw2k2ji380vas-gcc-10.3.0/include:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/include:/gnu/store/qkg8bndfinrvfs4798lhvchgh7j3sn9s-linux-libre-headers-5.10.35/include' environment variable `LIBRARY_PATH' set to `/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib:/gnu/store/4psm3q84k8v07a56sivkh4i5gajsn2py-bzip2-1.0.8/lib:/gnu/store/6jhgwsfdzmlyhaf86bdnqgcha74pxxyv-xz-5.2.5/lib:/gnu/store/g7h73b2wf671mm7wq7zl747grklkzw8f-file-5.39/lib:/gnu/store/6170yq2hsfjj0al4sx1z9b593bvg7vd7-gawk-5.1.0/lib:/gnu/store/34736lj55frwg7byyr1y3n3ip5lskh2f-binutils-2.37/lib:/gnu/store/3jr84ajdz821y480c454pqrswxbhgzlq-glibc-2.33/lib:/gnu/store/y7dwdckw1rzmhqfc8g6cgi71afmdql0z-glibc-2.33-static/lib:/gnu/store/k35qrb0himksbl5qh44sw66vmx3gxmkr-glibc-utf8-locales-2.33/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/k35qrb0himksbl5qh44sw66vmx3gxmkr-glibc-utf8-locales-2.33/lib/locale' phase `set-paths' succeeded after 0.0 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' digest/ digest/NAMESPACE digest/demo/ digest/demo/vectorised.R digest/demo/00Index digest/ChangeLog digest/README.md digest/man/ digest/man/digest2int.Rd digest/man/vdigest.Rd digest/man/sha1.Rd digest/man/digest.Rd digest/man/AES.Rd digest/man/hmac.Rd digest/man/makeRaw.Rd digest/DESCRIPTION digest/build/ digest/build/vignette.rds digest/tests/ digest/tests/tinytest.R digest/src/ digest/src/pmurhash.c digest/src/digest2int.c digest/src/zlib.h digest/src/xxhash.c digest/src/md5.c digest/src/sha1.h digest/src/aes.c digest/src/blake3_portable.c digest/src/spooky_serialize.cpp digest/src/xxhash.h digest/src/sha256.h digest/src/init.c digest/src/crc32.c digest/src/crc32.h digest/src/blake3.h digest/src/sha1.c digest/src/digest.c digest/src/sha2.c digest/src/zutil.h digest/src/sha2.h digest/src/Makevars digest/src/blake3_dispatch.c digest/src/zconf.h digest/src/blake3.c digest/src/blake3_impl.h digest/src/aes.h digest/src/SpookyV2.h digest/src/raes.c digest/src/SpookyV2.cpp digest/src/md5.h digest/src/sha256.c digest/src/pmurhash.h digest/vignettes/ digest/vignettes/sha1.md digest/vignettes/water.css digest/R/ digest/R/hmac.R digest/R/zzz.R digest/R/vdigest.R digest/R/init.R digest/R/AES.R digest/R/digest.R digest/R/digest2int.R digest/R/sha1.R digest/MD5 digest/inst/ digest/inst/GPL-2 digest/inst/doc/ digest/inst/doc/sha1.R digest/inst/doc/sha1.md digest/inst/doc/sha1.html digest/inst/include/ digest/inst/include/pmurhashAPI.h digest/inst/tinytest/ digest/inst/tinytest/test_encoding.R digest/inst/tinytest/test_sha1.R digest/inst/tinytest/test_digest.R digest/inst/tinytest/test_aes.R digest/inst/tinytest/test_hmac.R digest/inst/tinytest/test_digest2int.R digest/inst/tinytest/test_raw.R digest/inst/tinytest/test_num2hex.R digest/inst/tinytest/test_misc.R digest/inst/tinytest/test_new_matrix_behaviour.R digest/inst/tinytest/test_crc32.R digest/inst/tinytest/test_blake3.R digest/cleanup phase `unpack' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' patch-shebang: ./cleanup: changing `/bin/sh' to `/gnu/store/r7fs2zhzy8839mr3rmkxg68bwzaf9b9s-bash-minimal-5.1.8/bin/sh' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `install' Warning: unknown option ‘--no-build-vignettes’ * installing *source* package ‘digest’ ... file ‘cleanup’ has the wrong MD5 checksum ** using staged installation ** libs g++ -std=gnu++11 -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c SpookyV2.cpp -o SpookyV2.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c aes.c -o aes.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c blake3.c -o blake3.o In function ‘compress_subtree_to_parent_node’, inlined from ‘blake3_hasher_update.part.0’ at blake3.c:535:7: blake3.c:357:5: warning: ‘memcpy’ reading 64 bytes from a region of size 32 [-Wstringop-overflow=] 357 | memcpy(cv_array, out_array, num_cvs * BLAKE3_OUT_LEN); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘compress_parents_parallel’, inlined from ‘compress_subtree_to_parent_node’ at blake3.c:356:9, inlined from ‘blake3_hasher_update.part.0’ at blake3.c:535:7: blake3.c:244:5: warning: ‘memcpy’ writing 32 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 244 | memcpy(&out[parents_array_len * BLAKE3_OUT_LEN], | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 | &child_chaining_values[2 * parents_array_len * BLAKE3_OUT_LEN], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 | BLAKE3_OUT_LEN); | ~~~~~~~~~~~~~~~ In function ‘compress_subtree_to_parent_node’, inlined from ‘blake3_hasher_update.part.0’ at blake3.c:535:7: blake3.c:357:5: warning: ‘memcpy’ reading 64 bytes from a region of size 32 [-Wstringop-overflow=] 357 | memcpy(cv_array, out_array, num_cvs * BLAKE3_OUT_LEN); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In function ‘compress_parents_parallel’, inlined from ‘compress_subtree_to_parent_node’ at blake3.c:356:9, inlined from ‘blake3_hasher_update.part.0’ at blake3.c:535:7: blake3.c:244:5: warning: ‘memcpy’ writing 32 bytes into a region of size 0 overflows the destination [-Wstringop-overflow=] 244 | memcpy(&out[parents_array_len * BLAKE3_OUT_LEN], | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 | &child_chaining_values[2 * parents_array_len * BLAKE3_OUT_LEN], | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 | BLAKE3_OUT_LEN); | ~~~~~~~~~~~~~~~ In function ‘compress_subtree_to_parent_node’, inlined from ‘blake3_hasher_update.part.0’ at blake3.c:535:7: blake3.c:357:5: warning: ‘memcpy’ reading 96 bytes from a region of size 32 [-Wstringop-overflow=] 357 | memcpy(cv_array, out_array, num_cvs * BLAKE3_OUT_LEN); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c blake3_dispatch.c -o blake3_dispatch.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c blake3_portable.c -o blake3_portable.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c crc32.c -o crc32.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c digest.c -o digest.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c digest2int.c -o digest2int.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c init.c -o init.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c md5.c -o md5.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c pmurhash.c -o pmurhash.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c raes.c -o raes.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sha1.c -o sha1.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sha2.c -o sha2.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c sha256.c -o sha256.o g++ -std=gnu++11 -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c spooky_serialize.cpp -o spooky_serialize.o gcc -I"/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c xxhash.c -o xxhash.o g++ -std=gnu++11 -shared -L/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/lib -L/usr/local/lib -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/gnu/store/hdcadr8rjgcqkdpn2rsaws8drsvbj87a-r-minimal-4.1.2/lib/R/lib -lR installing to /gnu/store/ylkj1da2fywmi32vs5jy4b3ih4fgid2g-r-digest-0.6.29/site-library/00LOCK-digest/00new/digest/libs ** R ** demo ** inst ** tests ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (digest) phase `install' succeeded after 9.6 seconds starting phase `check' phase `check' succeeded after 0.0 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `make-dynamic-linker-cache' phase `make-dynamic-linker-cache' succeeded after 0.0 seconds starting phase `install-license-files' installing 0 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds