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environment variable `PATH' set to `/gnu/store/271j3n302pz5dnrbs9ymp4hp295z22mq-r-minimal-4.5.2/bin:/gnu/store/x5nk7jclncdrrsjhpmjjfl2z9p36bxyw-tar-1.35/bin:/gnu/store/vcmbby8alqahhhd5qnidpf5pbvr102jl-gzip-1.14/bin:/gnu/store/j2bib9ysq7f3369gjg6hv1kp24g07472-bzip2-1.0.8/bin:/gnu/store/plifc9akxxfyjjbnh10dj350nxbhc399-file-5.46/bin:/gnu/store/d7q1jypzi0hjx0gf2034yzljvapy7fvy-diffutils-3.12/bin:/gnu/store/3yky2jh15qsknnxnzplhj4by14sqmfig-patch-2.7.6/bin:/gnu/store/nfs39m8hsbx905q5kgjiw1irfrllkk00-findutils-4.10.0/bin:/gnu/store/xmqvvby6vlmhbi3q913ck5marh6p86av-gawk-5.3.0/bin:/gnu/store/d4bzgx28m0640plahv0x3h5hxlh1npnj-zstd-1.5.6/bin:/gnu/store/5a3p82yj9nrj6rhk11f7b2sb84wirc2k-sed-4.9/bin:/gnu/store/1lkl6hik16bbhpjjsl825fivp2dsr9vi-grep-3.11/bin:/gnu/store/gd41pn8r5723cyd6d79q9riqjbi070zz-xz-5.4.5/bin:/gnu/store/pai3hvsiihllqi03b2198qi5qq9a28ga-coreutils-9.1/bin:/gnu/store/jkxm9drwlxkmb53zn1sd7w2wxdvpbj32-make-4.4.1/bin:/gnu/store/k66i68s5l93n1lgxp29vn2292nsywp1v-bash-minimal-5.2.37/bin:/gnu/store/pazcfyngzb35khc8ad33dmsb22ibnl80-ld-wrapper-0/bin:/gnu/store/c8mp7qq5az7cbnvmxgj2bjkscsf5h9ri-binutils-2.44/bin:/gnu/store/wssvk5s5akbx78kx92bdkirrry87jvbj-gcc-14.3.0/bin:/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/bin:/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/sbin'
environment variable `R_LIBS_SITE' set to `/gnu/store/kr3jnx6i4hqjsis78y5k6yxcmv4dk0mg-r-biocmanager-1.30.27/site-library/:/gnu/store/svk0zr906zgz6js1908kv5rmsw7rwlv5-r-biostrings-2.78.0/site-library/:/gnu/store/qvpswgncks81crk6bgdsbzwdgf0n30bb-r-go-db-3.22.0/site-library/:/gnu/store/01jmpq3rxwkdpd7zzd7pfbywryn8ggrw-r-knitr-1.50/site-library/:/gnu/store/zg8fnwzzm0pr34mqw9lsjnsj3wi5dky9-r-runit-0.4.33.1/site-library/:/gnu/store/dy9maqhz2j30sxlqyfzmcdip5b8affic-r-annotationdbi-1.72.0/site-library/:/gnu/store/xjw20radl1iq2i3vpsbp0q5gljb4wx0c-r-biobase-2.70.0/site-library/:/gnu/store/sdj5l6nsmryiny677np532xgrglcdnyv-r-biocgenerics-0.56.0/site-library/:/gnu/store/0mb31xzvcryg597day75ka5f2wffc6xg-r-dbi-1.2.3/site-library/:/gnu/store/9inis4nvbyxycgll8g72rinc19cf02ls-r-rcurl-1.98-1.17/site-library/:/gnu/store/8ihihn4kaw5m4smkw05fl2xpgw6a7gya-r-rsqlite-2.4.4/site-library/:/gnu/store/y3aaf0ma5d5l71ql3wl6dsn3c4y107aa-r-s4vectors-0.48.0/site-library/:/gnu/store/2pysyssljv7nbrjbwy0camyf496i80i2-r-xml-3.99-0.20/site-library/:/gnu/store/7kh1ffj8f7ny25zl8g0rjn7j753syqs2-r-xvector-0.50.0/site-library/:/gnu/store/vgqm5vzr9hrbbxyky2f0icnvb0yxng23-r-seqinfo-1.0.0/site-library/:/gnu/store/2q4bwl05zivrhr4n8vfia9pya2nsl9cn-r-iranges-2.44.0/site-library/:/gnu/store/k47c8nw7vi5m46v1kg7sjrvljji05svm-r-crayon-1.5.3/site-library/:/gnu/store/lya35pzwmilz34j0xjy93nzkfabrd0k3-r-yaml-2.3.10/site-library/:/gnu/store/211ymkqka9r3nwpvpndh5553lyqkzs5l-r-xfun-0.54/site-library/:/gnu/store/648m3jwa1n8pyziji1bzd25fzhb0v1mh-r-highr-0.11/site-library/:/gnu/store/3m2iaw61xgr6nms17y72il0lj21j32jb-r-evaluate-1.0.5/site-library/:/gnu/store/wf6j3xivhbl8ly9inrwj0ra7zqwjmdcx-r-keggrest-1.50.0/site-library/:/gnu/store/w00jbinxgx5v7z5613wny9fgq018is2n-r-generics-0.1.4/site-library/:/gnu/store/bibavrf1z6axymc2jy8daqb5jcz425by-r-bitops-1.0-9/site-library/:/gnu/store/q83z93pn0nzi4agvdk6jdaihw1vdi773-r-rlang-1.1.6/site-library/:/gnu/store/lci33l959c09zsvizx8qlp0is9cbqk3n-r-plogr-0.2.0/site-library/:/gnu/store/n7lrqyp0svg4ym01sa5cnh4al7y24z3y-r-pkgconfig-2.0.3/site-library/:/gnu/store/pc957f56k611yjzbzn882g2zx1kf219j-r-memoise-2.0.1/site-library/:/gnu/store/7fg0wz6990m8bkyr9si3d7wfd0dhbqmg-r-cpp11-0.5.2/site-library/:/gnu/store/wdrbr9psr4gh43h4fnh672cpll5wgyaq-r-blob-1.2.4/site-library/:/gnu/store/qm2j3b1kbsx0dwiahnn3vgvniakgrs8w-r-bit64-4.6.0-1/site-library/:/gnu/store/m16jwklcpybccdrgnl6aqd5smdnkyx20-r-png-0.1-8/site-library/:/gnu/store/7p4mw408c5lxyrh8d0mlk5hm3q0jzisg-r-httr-1.4.7/site-library/:/gnu/store/6sxg655grm5wgf4zzdaiq0073b2aisbl-r-cachem-1.1.0/site-library/:/gnu/store/0bksakw9zj510isa7rp33hd72fh0g8nk-r-vctrs-0.6.5/site-library/:/gnu/store/kayf9ksnfkpmvp24ghm015xa6ihym1bm-r-bit-4.6.0/site-library/:/gnu/store/vlkp9qwd7k1jnzz34848h655m8ckx5f3-r-r6-2.6.1/site-library/:/gnu/store/2wlxc14l1bjgikbym0qs5vxf8lm07rxi-r-openssl-2.3.4/site-library/:/gnu/store/hpjmzyj8kad6ajvdxyhvrfw3ap7y48vp-r-mime-0.13/site-library/:/gnu/store/v775nkpib6sbz3q59yshrby71c5ykcp8-r-jsonlite-2.0.0/site-library/:/gnu/store/g9bxak7xss794pds4qfpafyfcn0cf53g-r-curl-7.0.0/site-library/:/gnu/store/rrawyx478p0bblrvfwgb5aqcg21nh29j-r-fastmap-1.2.0/site-library/:/gnu/store/2jm7igf1lhycvxmng0cf6ay06vh0f2ap-r-lifecycle-1.0.4/site-library/:/gnu/store/7k1d6dvd3634glwvargf1aa80brnyipr-r-glue-1.8.0/site-library/:/gnu/store/3vl9ljw22y3w64wf4vgm3z0a6kgr3x0v-r-cli-3.6.5/site-library/:/gnu/store/9gjbar7i1gw3jnmj775rik6dx6bqd1ax-r-askpass-1.2.1/site-library/:/gnu/store/7nwjxzbxpchxf4495z6s61jwq2a4j54w-r-sys-3.4.3/site-library/'
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environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/j2bib9ysq7f3369gjg6hv1kp24g07472-bzip2-1.0.8/include:/gnu/store/plifc9akxxfyjjbnh10dj350nxbhc399-file-5.46/include:/gnu/store/xmqvvby6vlmhbi3q913ck5marh6p86av-gawk-5.3.0/include:/gnu/store/gd41pn8r5723cyd6d79q9riqjbi070zz-xz-5.4.5/include:/gnu/store/jkxm9drwlxkmb53zn1sd7w2wxdvpbj32-make-4.4.1/include:/gnu/store/c8mp7qq5az7cbnvmxgj2bjkscsf5h9ri-binutils-2.44/include:/gnu/store/wssvk5s5akbx78kx92bdkirrry87jvbj-gcc-14.3.0/include/c++:/gnu/store/wssvk5s5akbx78kx92bdkirrry87jvbj-gcc-14.3.0/include:/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/include:/gnu/store/90qwxdmdw7jdf0dkkgdgxln6b5a57kzx-linux-libre-headers-6.12.17/include'
environment variable `OBJC_INCLUDE_PATH' set to `/gnu/store/j2bib9ysq7f3369gjg6hv1kp24g07472-bzip2-1.0.8/include:/gnu/store/plifc9akxxfyjjbnh10dj350nxbhc399-file-5.46/include:/gnu/store/xmqvvby6vlmhbi3q913ck5marh6p86av-gawk-5.3.0/include:/gnu/store/gd41pn8r5723cyd6d79q9riqjbi070zz-xz-5.4.5/include:/gnu/store/jkxm9drwlxkmb53zn1sd7w2wxdvpbj32-make-4.4.1/include:/gnu/store/c8mp7qq5az7cbnvmxgj2bjkscsf5h9ri-binutils-2.44/include:/gnu/store/wssvk5s5akbx78kx92bdkirrry87jvbj-gcc-14.3.0/include:/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/include:/gnu/store/90qwxdmdw7jdf0dkkgdgxln6b5a57kzx-linux-libre-headers-6.12.17/include'
environment variable `OBJCPLUS_INCLUDE_PATH' set to `/gnu/store/j2bib9ysq7f3369gjg6hv1kp24g07472-bzip2-1.0.8/include:/gnu/store/plifc9akxxfyjjbnh10dj350nxbhc399-file-5.46/include:/gnu/store/xmqvvby6vlmhbi3q913ck5marh6p86av-gawk-5.3.0/include:/gnu/store/gd41pn8r5723cyd6d79q9riqjbi070zz-xz-5.4.5/include:/gnu/store/jkxm9drwlxkmb53zn1sd7w2wxdvpbj32-make-4.4.1/include:/gnu/store/c8mp7qq5az7cbnvmxgj2bjkscsf5h9ri-binutils-2.44/include:/gnu/store/wssvk5s5akbx78kx92bdkirrry87jvbj-gcc-14.3.0/include/c++:/gnu/store/wssvk5s5akbx78kx92bdkirrry87jvbj-gcc-14.3.0/include:/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/include:/gnu/store/90qwxdmdw7jdf0dkkgdgxln6b5a57kzx-linux-libre-headers-6.12.17/include'
environment variable `LIBRARY_PATH' set to `/gnu/store/271j3n302pz5dnrbs9ymp4hp295z22mq-r-minimal-4.5.2/lib:/gnu/store/j2bib9ysq7f3369gjg6hv1kp24g07472-bzip2-1.0.8/lib:/gnu/store/plifc9akxxfyjjbnh10dj350nxbhc399-file-5.46/lib:/gnu/store/xmqvvby6vlmhbi3q913ck5marh6p86av-gawk-5.3.0/lib:/gnu/store/gd41pn8r5723cyd6d79q9riqjbi070zz-xz-5.4.5/lib:/gnu/store/c8mp7qq5az7cbnvmxgj2bjkscsf5h9ri-binutils-2.44/lib:/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/lib:/gnu/store/q1s19kv8bdq9ssfdgznzgkmfmj90vdfd-glibc-2.41-static/lib'
environment variable `GUIX_LOCPATH' set to `/gnu/store/yj053cys0724p7vs9kir808x7fivz17m-glibc-2.41/lib/locale'
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AnnotationForge/DESCRIPTION
AnnotationForge/MD5
AnnotationForge/NAMESPACE
AnnotationForge/NEWS
AnnotationForge/R/
AnnotationForge/R/NCBI_getters.R
AnnotationForge/R/makeAnnDbPkg.R
AnnotationForge/R/makeChipPackageFromDataFrames.R
AnnotationForge/R/makeInparanoidDbs.R
AnnotationForge/R/makeOrgPackage.R
AnnotationForge/R/makeOrgPackageFromNCBI.R
AnnotationForge/R/makeProbePackage.R
AnnotationForge/R/sqlForge_baseMapBuilder.R
AnnotationForge/R/sqlForge_makeAnnPkgs.R
AnnotationForge/R/sqlForge_schemaGen.R
AnnotationForge/R/sqlForge_seqnames.R
AnnotationForge/R/sqlForge_tableBuilder.R
AnnotationForge/R/sqlForge_utils.R
AnnotationForge/R/sqlForge_wrapBaseDBPkgs.R
AnnotationForge/R/test_AnnotationForge_package.R
AnnotationForge/README.md
AnnotationForge/build/
AnnotationForge/build/vignette.rds
AnnotationForge/inst/
AnnotationForge/inst/AnnDbPkg-templates/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/DESCRIPTION
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/NAMESPACE
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/R/zzz.R
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/extdata/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/ARACYC.Rd
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/BASE.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/CHR.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/CHRLENGTHS.Rd
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/GO.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/GO2ALLTAIRS.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/MAPCOUNTS.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/ORGANISM.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/PATH.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/PATH2TAIR.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/man/PMID.Rd
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/tests/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/tests/runalltests.R
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/tests/unit/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/tests/unit/test.R
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/DESCRIPTION
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/R/zzz.R
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/man/ARACYCENZYME.Rd
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/man/CHRLENGTHS.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/man/CHRLOC.Rd
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AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/man/PATH.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/man/PATH2PROBE.Rd
AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/man/PMID.Rd
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AnnotationForge/inst/AnnDbPkg-templates/BASEPKG.DB/
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AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/man/CHRLENGTHS.Rd
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AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/man/PATH.Rd
AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/man/PMID.Rd
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AnnotationForge/inst/AnnDbPkg-templates/YEASTCHIP.DB/tests/unit/test.R
AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/
AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/DESCRIPTION
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AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/man/PMID.Rd
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AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/tests/unit/test.R
AnnotationForge/inst/NOTES-Herve
AnnotationForge/inst/ProbePkg-template/
AnnotationForge/inst/ProbePkg-template/DESCRIPTION
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AnnotationForge/inst/extdata/GentlemanLab/generateSchemas.R
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AnnotationForge/inst/script/fasterOrgRecipe.R
AnnotationForge/inst/script/makeNoSchemaChipDb.R
AnnotationForge/inst/script/makeNoSchemaDb.R
AnnotationForge/inst/script/viableIDs.R
AnnotationForge/inst/seqnames-template/
AnnotationForge/inst/seqnames-template/DESCRIPTION
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AnnotationForge/man/available.db0pkgs.Rd
AnnotationForge/man/generateSeqnames_db.Rd
AnnotationForge/man/getProbeDataAffy.Rd
AnnotationForge/man/getProbeData_1lq.Rd
AnnotationForge/man/makeChipPackageFromDataFrames.Rd
AnnotationForge/man/makeInpDb.Rd
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AnnotationForge/man/makeOrgPackageFromNCBI.Rd
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AnnotationForge/man/sqlForge-makeCHIPDB.Rd
AnnotationForge/man/sqlForge-popDB.Rd
AnnotationForge/man/sqlForge-wrapDBPackages.Rd
AnnotationForge/tests/
AnnotationForge/tests/AnnotationForge_unit_tests.R
AnnotationForge/vignettes/
AnnotationForge/vignettes/DBschema-discussion.txt
AnnotationForge/vignettes/Homo_sapiens.pdf
AnnotationForge/vignettes/MakingNewAnnotationPackages.Rnw
AnnotationForge/vignettes/MakingNewOrganismPackages.Rmd
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AnnotationForge/vignettes/makeProbePackage.Rmd
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