starting phase `set-SOURCE-DATE-EPOCH' phase `set-SOURCE-DATE-EPOCH' succeeded after 0.0 seconds starting phase `set-paths' environment variable `PATH' set to `/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/bin:/gnu/store/ggfdxvdgbrjvg2cx3mm7yv5j1y433b01-tar-1.32/bin:/gnu/store/ink6zpk9adb2k2w6a0qif3d45vazl7dv-gzip-1.10/bin:/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/bin:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/bin:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/bin:/gnu/store/yl67anl7279qzrd3kxzj97541jzr2k3d-diffutils-3.7/bin:/gnu/store/w5n1p8kj9zn4zmjhr0bjbknakxij67w2-patch-2.7.6/bin:/gnu/store/x03dmf3xhi3il3mx383zpl4zic38iz1p-findutils-4.7.0/bin:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/bin:/gnu/store/wk5vdnms96n2iqfpqyg9gl5lhg8vdc32-sed-4.8/bin:/gnu/store/f3qp8l7f6kmfrvwnyix35kax2lv7lmnb-grep-3.4/bin:/gnu/store/wiv74mq31s0vppzm99qwnjkd8xa3albw-coreutils-8.32/bin:/gnu/store/j7fqszmnydxix8l35d7l3b7dj44qjrw4-make-4.3/bin:/gnu/store/7sfbiqh21h90bc6zi8br1xh60m6qgdd5-bash-minimal-5.0.16/bin:/gnu/store/5m8wvcahy3dgpyhxlq5aq85zbvh5jqfz-ld-wrapper-0/bin:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/bin:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/bin:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/bin:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/sbin' environment variable `R_LIBS_SITE' set to `/gnu/store/mll0jy02s8y2x1qc5hkcsrss90n9738d-r-biocgenerics-0.36.1/site-library/:/gnu/store/l1w9f0bhzv21dnbhmx7jraqwh684vrjq-r-htqpcr-1.44.0/site-library/:/gnu/store/np097khh716m9a33nc09x45fqhpwsj6f-r-rcolorbrewer-1.1-2/site-library/:/gnu/store/74ys2gkap87f7qg9xy1d5mg2z8sw3mjv-r-limma-3.46.0/site-library/:/gnu/store/jwagbpv3z55s5r6288k18nn798i0zg2f-r-gplots-3.1.1/site-library/:/gnu/store/ym6c4l4ppbjb24r7hkvjwbl7lc1syjfw-r-biobase-2.50.0/site-library/:/gnu/store/qgshx1qj2zqcwhl544h1ijcw6mg25ir5-r-affy-1.68.0/site-library/:/gnu/store/g1iyrrrbgl615ry0lyrf9xa7n7var56a-r-kernsmooth-2.23-20/site-library/:/gnu/store/sa116jf6sa4m6himwx2sxwwxq9ryjrdx-r-gtools-3.8.2/site-library/:/gnu/store/b7yh98ysqjc45i74sx5l92irjpvypsmy-r-catools-1.18.2/site-library/:/gnu/store/b652k7kfkqr9nv15d6zjssc9hpl39alf-r-zlibbioc-1.36.0/site-library/:/gnu/store/cvdw7s659q9hc55gzx4zhqbbq4g3ryz2-r-preprocesscore-1.52.1/site-library/:/gnu/store/y2qpypgn9mazy48v4hhqwjrq700y92rp-r-biocmanager-1.30.12/site-library/:/gnu/store/zz9bygw6cqhx76aysb7m2d07hdm0f9va-r-affyio-1.60.0/site-library/:/gnu/store/hkvxql9bpshk4g6rcrr2s6m3yf8j7np8-r-bitops-1.0-7/site-library/' environment variable `BASH_LOADABLES_PATH' unset environment variable `C_INCLUDE_PATH' set to `/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/include:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/include:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/include:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/include:/gnu/store/j7fqszmnydxix8l35d7l3b7dj44qjrw4-make-4.3/include:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/include:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/include:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/include:/gnu/store/nkpdg3jwllrsh7wbkzgflkcpyjn5wp0q-linux-libre-headers-5.4.20/include' environment variable `CPLUS_INCLUDE_PATH' set to `/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/include:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/include:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/include:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/include:/gnu/store/j7fqszmnydxix8l35d7l3b7dj44qjrw4-make-4.3/include:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/include:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/include/c++:/gnu/store/ap7hgyv4rjqmhg4a6cb6cypsh3g1f5q4-gcc-7.5.0/include:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/include:/gnu/store/nkpdg3jwllrsh7wbkzgflkcpyjn5wp0q-linux-libre-headers-5.4.20/include' environment variable `LIBRARY_PATH' set to `/gnu/store/hxr4yq45lgzl1rzxgkaha6zx6999605m-r-minimal-4.0.4/lib:/gnu/store/n8dfjyw11airbnfzz192p9bdbgf31kvj-bzip2-1.0.8/lib:/gnu/store/ggq21is2vyq1jkkqrs90brmwayc4rnmy-xz-5.2.4/lib:/gnu/store/qlxznrl2zzivcln9zgyzw2zshqkjirfs-file-5.38/lib:/gnu/store/j80hcnd9p1hh0yb5j1r0gn4vd329a78n-gawk-5.0.1/lib:/gnu/store/5371r5kyj50l6176lg6jbfzgfgb2xh14-binutils-2.34/lib:/gnu/store/cb88z63hyg1icd2kkahiink2p291mhr2-glibc-2.31/lib:/gnu/store/z7hanmdmdalqh1v0y7z8ilinfhyfh91d-glibc-2.31-static/lib:/gnu/store/4xjcx6g4i229hzzqpqak6vw9bvqh88gi-glibc-utf8-locales-2.31/lib' environment variable `GUIX_LOCPATH' set to `/gnu/store/4xjcx6g4i229hzzqpqak6vw9bvqh88gi-glibc-utf8-locales-2.31/lib/locale' phase `set-paths' succeeded after 0.1 seconds starting phase `install-locale' using 'en_US.utf8' locale for category "LC_ALL" phase `install-locale' succeeded after 0.0 seconds starting phase `unpack' unifiedWMWqPCR/DESCRIPTION unifiedWMWqPCR/NAMESPACE unifiedWMWqPCR/NEWS unifiedWMWqPCR/R/ unifiedWMWqPCR/R/Datasets.R unifiedWMWqPCR/R/S3Generics.R unifiedWMWqPCR/R/allGenerics.R unifiedWMWqPCR/R/as.matrix.uwmwEstimate.R unifiedWMWqPCR/R/as.matrix.uwmwRes.R unifiedWMWqPCR/R/forestplot_methods.R unifiedWMWqPCR/R/getEstimate_methods.R unifiedWMWqPCR/R/groups.message.R unifiedWMWqPCR/R/outer.h.f.R unifiedWMWqPCR/R/outer.o.f.R unifiedWMWqPCR/R/plotMethoduwmwRes.R unifiedWMWqPCR/R/prepdf.R unifiedWMWqPCR/R/sandwich1.f.R unifiedWMWqPCR/R/sandwich2.f.R unifiedWMWqPCR/R/sandwich3.f.R unifiedWMWqPCR/R/sort.uwmwRes.R unifiedWMWqPCR/R/uWMW.H.R unifiedWMWqPCR/R/uWMW.O.R unifiedWMWqPCR/R/uWMW_Extract.R unifiedWMWqPCR/R/uWMW_internal.R unifiedWMWqPCR/R/uWMW_methods.R unifiedWMWqPCR/R/unifiedWMWqPCR-package.R unifiedWMWqPCR/R/uwmwEstimate_Class.R unifiedWMWqPCR/R/uwmwRes_Class.R unifiedWMWqPCR/R/uwmw_Accessors.R unifiedWMWqPCR/R/uwmw_Showmethods.R unifiedWMWqPCR/R/volcano-internal.R unifiedWMWqPCR/R/volcanoplot.R unifiedWMWqPCR/R/wmw.f.R unifiedWMWqPCR/build/ unifiedWMWqPCR/build/vignette.rds unifiedWMWqPCR/data/ unifiedWMWqPCR/data/NBdata.rda unifiedWMWqPCR/data/NBmat.rda unifiedWMWqPCR/inst/ unifiedWMWqPCR/inst/CITATION unifiedWMWqPCR/inst/NEWS unifiedWMWqPCR/inst/doc/ unifiedWMWqPCR/inst/doc/unifiedWMWqPCR.R unifiedWMWqPCR/inst/doc/unifiedWMWqPCR.Rnw unifiedWMWqPCR/inst/doc/unifiedWMWqPCR.pdf unifiedWMWqPCR/man/ unifiedWMWqPCR/man/NBdata.Rd unifiedWMWqPCR/man/as.matrix.uwmwEstimate.Rd unifiedWMWqPCR/man/as.matrix.uwmwRes.Rd unifiedWMWqPCR/man/forestplot-methods.Rd unifiedWMWqPCR/man/getEstimate-methods.Rd unifiedWMWqPCR/man/plot.Rd unifiedWMWqPCR/man/sort_uwmwRes.Rd unifiedWMWqPCR/man/uWMW-methods.Rd unifiedWMWqPCR/man/unifiedWMWqPCR-package.Rd unifiedWMWqPCR/man/uwmwEstimate-class.Rd unifiedWMWqPCR/man/uwmwRes-class.Rd unifiedWMWqPCR/man/uwmw_Accessors.Rd unifiedWMWqPCR/man/uwmw_Extract.Rd unifiedWMWqPCR/man/volcanopar.Rd unifiedWMWqPCR/man/volcanoplot-methods.Rd unifiedWMWqPCR/vignettes/ unifiedWMWqPCR/vignettes/unifiedWMWqPCR.Rnw phase `unpack' succeeded after 0.0 seconds starting phase `patch-usr-bin-file' phase `patch-usr-bin-file' succeeded after 0.0 seconds starting phase `patch-source-shebangs' phase `patch-source-shebangs' succeeded after 0.0 seconds starting phase `patch-generated-file-shebangs' phase `patch-generated-file-shebangs' succeeded after 0.0 seconds starting phase `install' * installing *source* package ‘unifiedWMWqPCR’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading Warning in file(con, "r") : URL 'https://bioconductor.org/config.yaml': status was 'Couldn't resolve host name' Warning in file(con, "r") : URL 'http://bioconductor.org/config.yaml': status was 'Couldn't resolve host name' Creating a generic function for ‘order’ from package ‘base’ in package ‘unifiedWMWqPCR’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in file(con, "r") : URL 'https://bioconductor.org/config.yaml': status was 'Couldn't resolve host name' Warning in file(con, "r") : URL 'http://bioconductor.org/config.yaml': status was 'Couldn't resolve host name' ** testing if installed package can be loaded from final location Warning in file(con, "r") : URL 'https://bioconductor.org/config.yaml': status was 'Couldn't resolve host name' Warning in file(con, "r") : URL 'http://bioconductor.org/config.yaml': status was 'Couldn't resolve host name' ** testing if installed package keeps a record of temporary installation path * DONE (unifiedWMWqPCR) phase `install' succeeded after 15.8 seconds starting phase `check' phase `check' succeeded after 0.0 seconds starting phase `patch-shebangs' phase `patch-shebangs' succeeded after 0.0 seconds starting phase `strip' phase `strip' succeeded after 0.0 seconds starting phase `validate-runpath' phase `validate-runpath' succeeded after 0.0 seconds starting phase `validate-documentation-location' phase `validate-documentation-location' succeeded after 0.0 seconds starting phase `delete-info-dir-file' phase `delete-info-dir-file' succeeded after 0.0 seconds starting phase `patch-dot-desktop-files' phase `patch-dot-desktop-files' succeeded after 0.0 seconds starting phase `install-license-files' installing 0 license files from '.' phase `install-license-files' succeeded after 0.0 seconds starting phase `reset-gzip-timestamps' phase `reset-gzip-timestamps' succeeded after 0.0 seconds starting phase `compress-documentation' phase `compress-documentation' succeeded after 0.0 seconds